mRNA_S-dermatodea_contig12777.1697.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12777.1697.1
Unique NamemRNA_S-dermatodea_contig12777.1697.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig12777.1697.1 vs. uniprot
Match: D7FH19_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH19_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 9.910e-113
Identity = 199/335 (59.40%), Postives = 240/335 (71.64%), Query Frame = 1
Query:    1 GKWQGAAAARDEIVELVEYCVGISRCLLEAATASDMPPAIVATMEDFEGEIGRVKTFVQTYRT-NTGCCWRT-TLSATDRTAAASHQAKLKNLLDAVLLGLQTQAHLDRQKLMRMIADRDPPPLETLADVPRGAPHLPPTYVERLAVVERVVLDLIDPDRLPSAAHCLLGMGGGGKTILASSVVRDDRVRSVFKDGVFWVPVGRAGKSSLVLLLENLARDLAEAPAPEGVPPRRRSPHGLEGVDEAARHVAEVRERGGLRCLVVLDNAWDVEVVNAFGRTGFHLLVTTRQRQVVSPSHAGLFTEVGDMTRGEALEVLRLASRARGPLPDVEAGQV 999
            G  QGAAAAR+EIVEL  YCV +SRCLL+AA A  MP  I +T+E+F+GE+  V  FVQTY T ++GCCWR   L+A DR  AA H+ KLK+LLDAVL GL  Q +    ++  MI  RDPP L  LA++PR AP LP TYV+R A++E VV DL  P R  SA HCLLGMGGGGKT++ASSVVRDDRVR+ FK G+FWVPVGR GK  + LLLE+LA +L+  P        R  P+   G +EA RH++ V    GLRCLVVLDN W+VEVVNAF  TGFH+LVTTRQR V+S  HAG++TEVGDM+  +ALEVL  AS+A GPLP  EA QV
Sbjct:  106 GAVQGAAAAREEIVELARYCVAMSRCLLDAAKADVMPETIKSTLEEFKGEMEAVGRFVQTYGTRSSGCCWRRMVLNAHDRDTAAGHKRKLKDLLDAVLAGLAAQTNQGLNQIKGMILARDPPSLGALAEIPREAPVLPTTYVQRTAMLEEVVDDLTHPHRSASATHCLLGMGGGGKTLIASSVVRDDRVRARFKRGIFWVPVGREGKD-VALLLEHLAVELSRVPTDTP----RSCPNRFSGAEEALRHLSSVCAEDGLRCLVVLDNVWNVEVVNAFASTGFHVLVTTRQRAVISAVHAGVWTEVGDMSEEDALEVLSKASQADGPLPAEEARQV 435          
BLAST of mRNA_S-dermatodea_contig12777.1697.1 vs. uniprot
Match: A0A6H5L982_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 2.190e-50
Identity = 122/334 (36.53%), Postives = 167/334 (50.00%), Query Frame = 1
Query:   10 QGAAAARDEIVELVEYCVGISRCLLEAATASDMPPAIVATMEDFEGEIGRVKTFVQTYRTNTGCCWRTTLSATDRTAAASHQAKLKNLLDAV----LLGLQTQAHLDRQKLMRMIADRDPPPLETLADVPRGAPHLPPTYVERLAVVERVVLDLIDPDRLPSAAHCLLGMGGGGKTILASSVVRDDRVRSVFKDGVFWVPVGRAGKSSLVLLLENLARDLAEAPAPEGVPPRRRSPHGLEGVDEAARHVAEVRERGGLRCLVVLDNAWDVEVVNAFGRTGFHLLVTTRQRQVVSPSHAGLFTEVGDMTRGEALEVLRLASRARGPLPDVEAGQV 999
            +GAA A + + EL+ +C  ++  LL+     D    ++  + DF     ++    +   T   C       A D        AKL+++ + +    +L +  +    R           PP    +A +P  AP LPP +VER  +VE V  DL   +R    A  L G+ GGGKT+ ASSVVR + VR  FKDG+FWV VG+ G  +   LL+ LA DLA AP+       R  PH    V+    H+  V E+G LRCLVVLDN WD E+V  F RTGF  LVTTR   +V     G  T V  +T  EALE+L+ ASRA   +P  E  +V
Sbjct:   76 EGAAEADENLRELIAWCAFLTDVLLQHGKEVDALAPVMKPLRDFVSTTNQLAKRAKRLATRRKCA-ALLCFARDGKQIQDFDAKLRSIWNDIQGVTILWVSAEFRAAR-----------PPKTGEMAKIPHNAPALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGIPGGGKTVAASSVVRCENVRRSFKDGIFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRP----RTVPHEFRDVEHVVSHLVGVLEQGNLRCLVVLDNVWDREMVPLFLRTGFRCLVTTRDVAMVPRHLWGTCTPVDMLTEAEALELLKKASRATSSIPRDEGLEV 393          
BLAST of mRNA_S-dermatodea_contig12777.1697.1 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 9.010e-47
Identity = 122/332 (36.75%), Postives = 165/332 (49.70%), Query Frame = 1
Query:   10 QGAAAARDEIVELVEYCVGISRCLLEAATASDMPPAIVATMEDFEGEIGRVKTFVQTYRTNTGCCWRTTLSATDRTAAASHQAKLKNLLDAVLLGLQTQAHLDRQKLMRMIADRDPPPLETLADVPRGAPHLPPTYVERLAVVERVVLDLIDPDRLPSAAHCLLGMGGGGKTILASSVVRDDRVRSVFKDGVFWVPVGRAGKSSLVLLLENLARDLAEAPA--PEGVPPRRRSPHGLEGVDEAARHVAEVRERGGLRCLVVLDNAWDVEVVNAFGRTGFHLLVTTRQRQVVSPSHAGLFTEVGDMTRGEALEVLRLASRARGPLPDVEAGQV 999
            +GA      + ELV +C  +    +E     D    I   M+DF      +    +      G C        D         KL+++ D +        + D +  +       PP    +A VP+ A  LPP +VER  + + VV DL+  DR  +AAH L GM GGGKTI A +VVR + VR  FKDG+FWV VG+ G  + + LL+ LARDLA AP+  P  VP      H    V+ A  H+  VR+   LRCLVVLD+ WD ++V  F   GFH LVTTR   V+     G+ TEV  +T  EALE+L+ ASRA   +P  E  +V
Sbjct:  117 EGAIEVAKNLEELVSWCSFLVGVFIEHGKQEDNLRPIAKPMKDFVATTIELAKRAKAMGAR-GKCTALLCHRRDGKQVQDFDVKLRHIWDDIQGVTLLAFYSDFRATL-------PPKTAYMARVPKNAKQLPPAFVERRDLFKAVVKDLVATDRATNAAHVLRGMPGGGKTIAAKAVVRCEDVRRSFKDGIFWVQVGQVGTGNPMALLQGLARDLAHAPSHQPHTVP------HEFVDVEHAVSHLEGVRKERNLRCLVVLDDVWDAQIVPLFLCGGFHSLVTTRDLAVIPRDLQGVCTEVEMLTNAEALELLKNASRATAAIPTNEGLKV 434          
BLAST of mRNA_S-dermatodea_contig12777.1697.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 1.070e-43
Identity = 124/327 (37.92%), Postives = 173/327 (52.91%), Query Frame = 1
Query:   10 QGAAAARDEIVELVEYCVGISRCLLEAATASDMPPAIVATMEDFEGEIGRVKTFVQTYRTNTGCCWRTTLSATDRTAAASHQAKLKNLLDAVLLGLQTQAHLDRQKLMRMIADRDPPPLETLADVPRGAPHLP-PTYVERLAVVERVVLDLIDPDRLPSAAHCLLGMGGGGKTILASSVVRDDRVRSVFKDGVFWVPVGRAGKSSLVLLLENLARDL--AEAPAPEGVPPRRRSPHGLEGVDEAARHVAEVRERGGLRCLVVLDNAWDVEVVNAFGRTGFHLLVTTRQRQVVSPSHAGLFTEVGDMTRGEALEVLRLASRARGPLPD 981
            +GAA ++ ++  LV  C  ++  L++   A      +   +EDF      +  F   +  N G C        D +A A  +  L+ +   + L    + H   Q  +  +    PP L  +A VP GA  LP  +YVER AV E  V D +     P A + ++GMGGGGK++LAS+VVR   VR  F+ G+FWV VGR  KSSL+ LL+ LAR++  A   AP  VP      H L+G+++  +H+A V   G    LVVLD+ W+ EVV+AF   GF +L+TTR R VV      L  EVGDMT  EALE+LR +S A G   D
Sbjct:   88 EGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWA-NGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHH---QSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQE--VADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVP------HVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRL--EVGDMTEEEALELLRKSSGAVGQPGD 400          
BLAST of mRNA_S-dermatodea_contig12777.1697.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 4.380e-42
Identity = 123/331 (37.16%), Postives = 172/331 (51.96%), Query Frame = 1
Query:   10 QGAAAARDEIVELVEYCVGISRCLLEAATASDMPPAIVATMEDFEGEIGRVKTFVQTYRTNTGC----CWRTTLSATDRTAAASHQAKLKNLLDAVLLGLQTQAHLDRQKLMRMIADRDPPPLETLADVPRGAPHLPPT-YVERLAVVERVVLDLIDPDRLPSAAHCLLGMGGGGKTILASSVVRDDRVRSVFKDGVFWVPVGRAGKSSLVLLLENLARDLAEAP--APEGVPPRRRSPHGLEGVDEAARHVAEVRERGGLRCLVVLDNAWDVEVVNAFGRTGFHLLVTTRQRQVVSPSHAGLFTEVGDMTRGEALEVLRLASRARGPLPD 981
            +GAA  +D++  LV  C  ++  L++   A      +   ++DF      +  F   +     C    C R  LSA      A  +  L+ +   + L    + H   Q  +  +    PP L  +A VP GA  LP + YVER AV E  V D +       A + ++GMGGGGK++LAS+VVR   VR  F+ G+FWV VGR  KSSL+ LL+ LARD+  AP  AP GVP        L+ +++  +H+A V   G  + LVVLD+ W+ EVV+AF   GF +L+TTR R VV      L  E+GD+T  EALE+LR  S A G   D
Sbjct:  125 EGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSA-----LAGFEECLRRIRSDIALVDGLEHH---QSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQE--VADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVP------RVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRL--ELGDVTEEEALELLRKTSGAVGQPGD 437          
BLAST of mRNA_S-dermatodea_contig12777.1697.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 3.550e-41
Identity = 122/331 (36.86%), Postives = 170/331 (51.36%), Query Frame = 1
Query:   10 QGAAAARDEIVELVEYCVGISRCLLEAATASDMPPAIVATMEDFEGEIGRVKTFVQTY----RTNTGCCWRTTLSATDRTAAASHQAKLKNLLDAVLLGLQTQAHLDRQKLMRMIADRDPPPLETLADVPRGAPHLPPT-YVERLAVVERVVLDLIDPDRLPSAAHCLLGMGGGGKTILASSVVRDDRVRSVFKDGVFWVPVGRAGKSSLVLLLENLARDLAEAP--APEGVPPRRRSPHGLEGVDEAARHVAEVRERGGLRCLVVLDNAWDVEVVNAFGRTGFHLLVTTRQRQVVSPSHAGLFTEVGDMTRGEALEVLRLASRARGPLPD 981
            +GAA  +D++  LV  C  ++  L++   A      +   ++DF      +  F   +    +    CC R  LSA      A  +  L+ +   + L    + H   Q  +  +    PP L  +A VP GA  LP + YVER AV E  V D +       A + ++GMGGGGK++LAS+ VR   VR  F+ G+FWV VGR  KSSL+ LL+ LA D+  AP  AP GVP      H L+ +++  +H+A V   G    LVVLD+ W+ EVV+AF   GF +L+TTR R VV      L  E+GDMT  EALE+LR  S   G   D
Sbjct:  142 EGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSA-----LAGFEECLRRIGSDIALVDGLEHH---QSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQE--VADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVP------HVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRL--ELGDMTEEEALELLRKTSGTVGQPGD 454          
BLAST of mRNA_S-dermatodea_contig12777.1697.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 3.470e-39
Identity = 98/201 (48.76%), Postives = 125/201 (62.19%), Query Frame = 1
Query:  373 LADVPRGAPHLPPTYVERLAVVERVVLDLIDPDRLPSAAHCLLGMGGGGKTILASSVVRDDRVRSVFKDGVFWVPVGRAGKSSLVLLLENLARDLAEAPA--PEGVPPRRRSPHGLEGVDEAARHVAEVRERGGLRCLVVLDNAWDVEVVNAFGRTGFHLLVTTRQRQVVSPSHAGLFTEVGDMTRGEALEVLRLASRARG 969
            +A VP GA  LP +YVER AV E V   LI P+  P A + ++GMGGGGKT+L S+VVR   VR  F+ GVFW+ VGR  K+SL+ LL+ LAR+++ AP   P GVP      H LE +++  +H+A V   G    LVVLD+ W+ EVV+A    G  +LVTTR R VV  S  G   E+GDMT  EALE+L   SR  G
Sbjct:    1 MAAVPAGALTLPQSYVERAAVQE-VADGLIKPEE-PRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVP------HVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVS--GGLLELGDMTEEEALELLLKTSRTVG 191          
BLAST of mRNA_S-dermatodea_contig12777.1697.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 7.440e-38
Identity = 100/220 (45.45%), Postives = 133/220 (60.45%), Query Frame = 1
Query:  334 RMIADRDPPPLETLADVPRGAPHLP-PTYVERLAVVERVVLDLIDPDRLPSAAHCLLGMGGGGKTILASSVVRDDRVRSVFKDGVFWVPVGRAGKSSLVLLLENLARDLAEAP--APEGVPPRRRSPHGLEGVDEAARHVAEVRERGGLRCLVVLDNAWDVEVVNAFGRTGFHLLVTTRQRQVVSPSHAGLFTEVGDMTRGEALEVLRLASRARGPLPDV 984
            R+  D  PP L  +A+VP GA  LP  +YVER AV E V   L +P+  P   + ++G+GGGGK++LAS+VVR   VR  F+ G+ WV VGR  K+SL+ LL+ LAR++  AP  AP GVP      H L+ +++  +H+A V        LVVLD+ W+ EVV+AF   GF LL+TTR R +V      L  E+GDMT  EALE+LR  S    P  DV
Sbjct:   31 RIFTDILPPSLPDMAEVPVGALELPHSSYVERAAVQE-VADGLTNPEE-PRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVP------HALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRL--ELGDMTEEEALELLRKTSGTVDPGDDV 240          
BLAST of mRNA_S-dermatodea_contig12777.1697.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 4.980e-36
Identity = 102/252 (40.48%), Postives = 138/252 (54.76%), Query Frame = 1
Query:  232 RTAAASHQAKLKNLLDAVLLGLQTQAHLDRQKLMRMIADRDPPPLETLADVPRGAPHLPPTYVERLAVVERVVLDLIDPDRLPSAAHCLLGMGGGGKTILASSVVRDDRVRSVFKDGVFWVPVGRAGKSSLVLLLENLARDLAEAP--APEGVPPRRRSPHGLEGVDEAARHVAEVRERGGLRCLVVLDNAWDVEVVNAFGRTGFHLLVTTRQRQVVSPSHAGLFTEVGDMTRGEALEVLRLASRARGPLPD 981
            R   ASH   +  +  A+L+         R+    MI D  PP L   A VP GA  LP +YVER  V E +  DL+DP++   A + ++GMGGGGKT+LAS++VR   V   F+ G+FW+ +GR    SL+  L+ LAR++  AP  AP GVP      H  + +++  +H+A V  RG    LVVLD+ W+ EVV AF   G  +LVTTR R +V     G   E+GDM   EALE+L   S   G   D
Sbjct:  191 RITFASH-VSIVAVFGALLVVSSAVIWAQRKAFSTMIRDVLPPTLPQRAAVPTGALALPRSYVERPGVQEAMG-DLMDPEKA-LAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVP------HVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVP--GGLLELGDMAEDEALELLWKTSGTVGQPGD 431          
BLAST of mRNA_S-dermatodea_contig12777.1697.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 5.710e-36
Identity = 116/331 (35.05%), Postives = 166/331 (50.15%), Query Frame = 1
Query:   10 QGAAAARDEIVELVEYCVGISRCLLEAATASDMPPAIVATMEDFEGEIGRVKTFVQTYRTNTGC----CWRTTLSATDRTAAASHQAKLKNLLDAVLLGLQTQAHLDRQKLMRMIADRDPPPLETLADVPRGAPHLPPTYVERLAVVERVVLDLIDPDRLPSAAHCLLGMGGGGKTILASSVVRDDRVRSVFKDGVFWVPVGRAGKSSLVLLLENLARDLAEAP--APEGVPPRRRSPHGLEGVDEAARHVAEV-RERGGLRCLVVLDNAWDVEVVNAFGRTGFHLLVTTRQRQVVSPSHAGLFTEVGDMTRGEALEVLRLASRARGPLPD 981
            +GAA   D++  LV  C  ++  L++   A      +   ++DF      +  F   +  +  C    C R  LSA      A  +  L+ +   + L    + H   Q  +  +    PP L  +A VP GA  LP  YVER AV E  V D +     P A + ++G+GGGGK++LAS+VVR   VR  F+ G+ WV VGR  K+SL+ LL+ LAR++  AP  AP  VP        L+ +++  +H+A V    G    LVVLD+ W+ EVV+A    GF +L+TTR   VV      L  ++GDMT  EALE+LR  S   G   D
Sbjct:  100 EGAAECEDKVQSLVSQCAFLATVLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSA-----LAGFEECLRGIRSDIALVDGLEQH---QLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERAAVQE--VADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVP------QVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRL--DLGDMTEEEALELLRKTSGTVGQPGD 412          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12777.1697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH19_ECTSI9.910e-11359.40NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5L982_9PHAE2.190e-5036.53NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LL58_ECTSI9.010e-4736.75NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KXS7_9PHAE1.070e-4337.92NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G720_ECTSI4.380e-4237.16NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G722_ECTSI3.550e-4136.86NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5LJA6_9PHAE3.470e-3948.76NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FUD7_ECTSI7.440e-3845.45NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D8LPV9_ECTSI4.980e-3640.48NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
D8LGG5_ECTSI5.710e-3635.05NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12777contigS-dermatodea_contig12777:4863..5888 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score366.7
Seed ortholog evalue1.2e-98
Seed eggNOG ortholog2880.D7FH19
KEGG koko:K10407
KEGG Pathwayko05132,map05132
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759,KOG4658@1,KOG4658@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Hectar predicted targeting categoryother localisation
Exons1
Model size1026
Cds size1026
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924261.0978858-CDS-S-dermatodea_contig12777:4862..58881622924261.0978858-CDS-S-dermatodea_contig12777:4862..5888Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12777 4863..5888 -
1694079132.8129935-CDS-S-dermatodea_contig12777:4862..58881694079132.8129935-CDS-S-dermatodea_contig12777:4862..5888Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12777 4863..5888 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12777.1697.1prot_S-dermatodea_contig12777.1697.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12777 4863..5888 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12777.1697.1

>prot_S-dermatodea_contig12777.1697.1 ID=prot_S-dermatodea_contig12777.1697.1|Name=mRNA_S-dermatodea_contig12777.1697.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=342bp
GKWQGAAAARDEIVELVEYCVGISRCLLEAATASDMPPAIVATMEDFEGE
IGRVKTFVQTYRTNTGCCWRTTLSATDRTAAASHQAKLKNLLDAVLLGLQ
TQAHLDRQKLMRMIADRDPPPLETLADVPRGAPHLPPTYVERLAVVERVV
LDLIDPDRLPSAAHCLLGMGGGGKTILASSVVRDDRVRSVFKDGVFWVPV
GRAGKSSLVLLLENLARDLAEAPAPEGVPPRRRSPHGLEGVDEAARHVAE
VRERGGLRCLVVLDNAWDVEVVNAFGRTGFHLLVTTRQRQVVSPSHAGLF
TEVGDMTRGEALEVLRLASRARGPLPDVEAGQVFPTLYMLL*
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mRNA from alignment at S-dermatodea_contig12777:4863..5888-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12777.1697.1 ID=mRNA_S-dermatodea_contig12777.1697.1|Name=mRNA_S-dermatodea_contig12777.1697.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1026bp|location=Sequence derived from alignment at S-dermatodea_contig12777:4863..5888- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGTAAATGGCAGGGCGCCGCAGCGGCCAGAGACGAGATCGTGGAGCTCGT CGAGTACTGCGTGGGGATCTCGAGATGCCTGCTCGAGGCCGCGACCGCGA GCGACATGCCCCCAGCCATCGTCGCCACGATGGAGGATTTCGAGGGCGAA ATTGGGAGGGTGAAGACCTTCGTCCAGACCTACCGCACCAACACCGGGTG CTGCTGGAGGACGACCCTCAGCGCGACCGACCGGACAGCGGCGGCGAGCC ACCAGGCGAAGCTCAAGAACCTCCTCGACGCGGTGCTGCTGGGGCTCCAG ACCCAGGCCCACCTCGACCGCCAGAAGCTCATGCGCATGATCGCCGACAG GGATCCCCCACCGCTGGAAACCCTCGCGGATGTCCCCCGCGGGGCACCCC ACCTCCCGCCCACCTACGTCGAGCGCCTCGCCGTCGTCGAGAGGGTCGTC CTCGACCTCATAGACCCCGACCGCCTCCCGTCTGCGGCCCACTGCCTCTT GGGGATGGGGGGCGGAGGCAAGACGATCCTCGCGTCCTCCGTCGTGCGAG ACGATCGAGTACGTTCCGTCTTCAAGGATGGCGTGTTCTGGGTTCCGGTC GGGCGCGCGGGGAAGTCCAGCCTGGTGTTGCTCCTGGAGAACCTGGCCCG CGACCTTGCGGAGGCCCCGGCGCCGGAGGGCGTGCCGCCGCGCCGCCGGA GCCCGCACGGGCTCGAGGGCGTCGACGAGGCCGCGCGGCACGTGGCCGAG GTGCGCGAAAGGGGCGGCCTGAGGTGCCTGGTCGTGCTGGACAACGCGTG GGACGTGGAGGTGGTGAACGCCTTCGGGAGGACGGGTTTCCACCTCCTCG TGACGACGCGGCAGCGCCAGGTGGTGTCGCCGTCTCACGCCGGTTTGTTC ACCGAAGTCGGGGACATGACTAGGGGGGAGGCTCTGGAGGTGCTGCGGCT GGCGAGCCGAGCCCGCGGCCCGCTGCCGGACGTCGAGGCTGGTCAGGTAT TTCCTACTTTGTACATGCTCCTGTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig12777:4863..5888-

>mRNA_S-dermatodea_contig12777.1697.1 ID=mRNA_S-dermatodea_contig12777.1697.1|Name=mRNA_S-dermatodea_contig12777.1697.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2052bp|location=Sequence derived from alignment at S-dermatodea_contig12777:4863..5888- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGTAAATGGCAGGGCGCCGCAGCGGCCAGAGACGAGATCGTGGAGCTCGT
CGAGTACTGCGTGGGGATCTCGAGATGCCTGCTCGAGGCCGCGACCGCGA
GCGACATGCCCCCAGCCATCGTCGCCACGATGGAGGATTTCGAGGGCGAA
ATTGGGAGGGTGAAGACCTTCGTCCAGACCTACCGCACCAACACCGGGTG
CTGCTGGAGGACGACCCTCAGCGCGACCGACCGGACAGCGGCGGCGAGCC
ACCAGGCGAAGCTCAAGAACCTCCTCGACGCGGTGCTGCTGGGGCTCCAG
ACCCAGGCCCACCTCGACCGCCAGAAGCTCATGCGCATGATCGCCGACAG
GGATCCCCCACCGCTGGAAACCCTCGCGGATGTCCCCCGCGGGGCACCCC
ACCTCCCGCCCACCTACGTCGAGCGCCTCGCCGTCGTCGAGAGGGTCGTC
CTCGACCTCATAGACCCCGACCGCCTCCCGTCTGCGGCCCACTGCCTCTT
GGGGATGGGGGGCGGAGGCAAGACGATCCTCGCGTCCTCCGTCGTGCGAG
ACGATCGAGTACGTTCCGTCTTCAAGGATGGCGTGTTCTGGGTTCCGGTC
GGGCGCGCGGGGAAGTCCAGCCTGGTGTTGCTCCTGGAGAACCTGGCCCG
CGACCTTGCGGAGGCCCCGGCGCCGGAGGGCGTGCCGCCGCGCCGCCGGA
GCCCGCACGGGCTCGAGGGCGTCGACGAGGCCGCGCGGCACGTGGCCGAG
GTGCGCGAAAGGGGCGGCCTGAGGTGCCTGGTCGTGCTGGACAACGCGTG
GGACGTGGAGGTGGTGAACGCCTTCGGGAGGACGGGTTTCCACCTCCTCG
TGACGACGCGGCAGCGCCAGGTGGTGTCGCCGTCTCACGCCGGTTTGTTC
ACCGAAGTCGGGGACATGACTAGGGGGGAGGCTCTGGAGGTGCTGCGGCT
GGCGAGCCGAGCCCGCGGCCCGCTGCCGGACGTCGAGGCTGGTCAGGTAT
TTCCTACTTTGTACATGCTCCTGTAGGGTAAATGGCAGGGCGCCGCAGCG
GCCAGAGACGAGATCGTGGAGCTCGTCGAGTACTGCGTGGGGATCTCGAG
ATGCCTGCTCGAGGCCGCGACCGCGAGCGACATGCCCCCAGCCATCGTCG
CCACGATGGAGGATTTCGAGGGCGAAATTGGGAGGGTGAAGACCTTCGTC
CAGACCTACCGCACCAACACCGGGTGCTGCTGGAGGACGACCCTCAGCGC
GACCGACCGGACAGCGGCGGCGAGCCACCAGGCGAAGCTCAAGAACCTCC
TCGACGCGGTGCTGCTGGGGCTCCAGACCCAGGCCCACCTCGACCGCCAG
AAGCTCATGCGCATGATCGCCGACAGGGATCCCCCACCGCTGGAAACCCT
CGCGGATGTCCCCCGCGGGGCACCCCACCTCCCGCCCACCTACGTCGAGC
GCCTCGCCGTCGTCGAGAGGGTCGTCCTCGACCTCATAGACCCCGACCGC
CTCCCGTCTGCGGCCCACTGCCTCTTGGGGATGGGGGGCGGAGGCAAGAC
GATCCTCGCGTCCTCCGTCGTGCGAGACGATCGAGTACGTTCCGTCTTCA
AGGATGGCGTGTTCTGGGTTCCGGTCGGGCGCGCGGGGAAGTCCAGCCTG
GTGTTGCTCCTGGAGAACCTGGCCCGCGACCTTGCGGAGGCCCCGGCGCC
GGAGGGCGTGCCGCCGCGCCGCCGGAGCCCGCACGGGCTCGAGGGCGTCG
ACGAGGCCGCGCGGCACGTGGCCGAGGTGCGCGAAAGGGGCGGCCTGAGG
TGCCTGGTCGTGCTGGACAACGCGTGGGACGTGGAGGTGGTGAACGCCTT
CGGGAGGACGGGTTTCCACCTCCTCGTGACGACGCGGCAGCGCCAGGTGG
TGTCGCCGTCTCACGCCGGTTTGTTCACCGAAGTCGGGGACATGACTAGG
GGGGAGGCTCTGGAGGTGCTGCGGCTGGCGAGCCGAGCCCGCGGCCCGCT
GCCGGACGTCGAGGCTGGTCAGGTATTTCCTACTTTGTACATGCTCCTGT
AG
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