prot_S-dermatodea_contig88460.16967.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig88460.16967.1
Unique Nameprot_S-dermatodea_contig88460.16967.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length55
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig88460.16967.1 vs. uniprot
Match: D8LQW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQW0_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 9.810e-12
Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:    5 RGRYEPPESELSTPLRRSDWTVPHGSALQALAAALDDAADNTKVS 49
            R RYEPPES ++TPLRRSDW VPHGSA+ ALAAALD+AA +T  S
Sbjct:  543 RIRYEPPESAITTPLRRSDWKVPHGSAMHALAAALDEAAGSTACS 587
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig88460.16967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQW0_ECTSI9.810e-1273.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig88460contigS-dermatodea_contig88460:291..455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig88460.16967.1mRNA_S-dermatodea_contig88460.16967.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig88460 291..455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig88460.16967.1 ID=prot_S-dermatodea_contig88460.16967.1|Name=mRNA_S-dermatodea_contig88460.16967.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=55bp
PPTNRGRYEPPESELSTPLRRSDWTVPHGSALQALAAALDDAADNTKVSA
EKSSR
back to top