mRNA_S-dermatodea_contig12773.1695.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12773.1695.1 vs. uniprot
Match: D8LCT7_ECTSI (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT7_ECTSI) HSP 1 Score: 219 bits (558), Expect = 3.750e-69 Identity = 108/133 (81.20%), Postives = 116/133 (87.22%), Query Frame = 1
Query: 250 VSLPPDGTVSLGVSRRPPPGDDSEALLGSSKLGDAEKTWGFCTSDGGAAATIKEGDVIGIALDFTDLPMLFFASGGVPLGQGDELAVMRIRGTVYPAVGVGGGAVVSVAFAAGSLAHPPPRKCQALVVGQDMI 648
++LPP GTVSLGVSRRPPP D S LL SKLGD EKTWGFCTSDGGAA T+KEGDVIGIALDFTDLPMLFF GG PLG+GDELAVMRIRGTVYPA GVGGGA +SVAFA SLAH PPRKC+AL+VGQDM+
Sbjct: 1 MTLPPGGTVSLGVSRRPPPDDASGELLSRSKLGDGEKTWGFCTSDGGAAGTLKEGDVIGIALDFTDLPMLFFTRGGDPLGEGDELAVMRIRGTVYPAFGVGGGAALSVAFAGDSLAHTPPRKCEALIVGQDMM 133
BLAST of mRNA_S-dermatodea_contig12773.1695.1 vs. uniprot
Match: A0A7S4Q9N0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q9N0_9DINO) HSP 1 Score: 108 bits (269), Expect = 8.400e-25 Identity = 65/163 (39.88%), Postives = 93/163 (57.06%), Query Frame = 1
Query: 163 VEGGRISGTGIALGCAPVEQDSAYWEATIVSLPPDGTVSLGVSRRPPPGDDS-EALLGSSKLGDAEKTWGFCTSDGGAAATIKEGDVIGIALDFTDLPMLFFASGGVPLGQGDELAVMRIRGTVYPAVGVGGGAVVSVAFAAGSLAHPPPRKCQALVVGQDMI 648
V G +SG+G+ LG A VEQD+AYWE +VSLP G+ +GV+R+ P D + A + A ++W + +A++ EGDV+G+A +LP L F G PL G +V IRGTV PA V GGAV+SVAF +PPP + L+ + ++
Sbjct: 58 VNGATVSGSGVVLGGAEVEQDAAYWEVRVVSLPEGGSCCMGVARQTVPLDAALSAPMRPGAEAGAAQSWALSS----LSASLMEGDVVGVAFGLGELPNLRFFCNGEPLEVG---SVTHIRGTVCPAFSVHGGAVLSVAFERDGFRYPPPARFTELIPTRSLL 213
BLAST of mRNA_S-dermatodea_contig12773.1695.1 vs. uniprot
Match: A0A7S4QBI5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QBI5_9DINO) HSP 1 Score: 100 bits (250), Expect = 5.770e-22 Identity = 64/176 (36.36%), Postives = 96/176 (54.55%), Query Frame = 1
Query: 163 VEGGRISGTGIALGCAPVEQDSAYWEATIVSLPPDGTVSLGVSRRPPPGD---------DSEALLGSSKLGDA-----EKTWGFCTSDGGAAATIKEGDVIGIALDFTDLPMLFFASGGVPLGQGDELAVMRIRGTVYPAVGVGGGAVVSVAFAAGSLAHPPPRKCQALVVGQDMI 648
++G +SG+G+ LG A VEQD+AYWE +V+LP G+ +GV+R+ P D D E L ++ L +A +W + A+A + EGDV+G+A +LP L F G PL +G +V +RGTV PA V GGAV++V F + PP K L+ + ++
Sbjct: 52 LDGDTVSGSGVVLGGAEVEQDAAYWEVRVVTLPEGGSCCMGVARQSVPLDAPLVAPARPDPEVLGAATDLAEAGAAPASVSWALSS----ASALLNEGDVVGVAFGQGELPNLRFFCNGEPLERG---SVAHVRGTVCPAFSVHGGAVLTVTFEHDGFRYTPPAKFTELIPMRSLL 220
BLAST of mRNA_S-dermatodea_contig12773.1695.1 vs. uniprot
Match: A0A7S2CN07_9STRA (SPRY domain-containing protein 7 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CN07_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.510e-19 Identity = 61/189 (32.28%), Postives = 94/189 (49.74%), Query Frame = 1
Query: 91 IELGSSSTGTPFTMHGTLRGKDVVVEGGR---ISGTGIALGCAPVEQDSAYWEATIVSLPPDGTVSLGVSRRPPPGDDSEALLGSSKLGDAEKTWGFCTSDGGAAATIKEGDVIGIALDFTDLPMLFFASGGVPLGQGDELAVMRIRGTVYPAVGVGGGAVVSVAFAAGSLAHPPPRKCQALVVGQDMI 648
+EL T + RG +V V+ G I+G G+AL AP+EQD+AYWE + G + +GV+R+ G+ + S+K E +C A +++GDV+G+A DLP L F G + D V +I GTVYP V +GGGA + F + + PP + L+V + ++
Sbjct: 30 VELNEKETRPHIGIPDDFRGPNVKVDTGESLCITGDGVALASAPIEQDAAYWEIHVTKT---GLIKVGVARKMNRGELDKTFDASAK---DENGRSWCLDGTDTRANLEDGDVVGVAFTQADLPNLSFTKNGKAINFAD---VKKIPGTVYPVVMIGGGASIEAVFDPEKMNNQPPPTFKPLMVVRSIL 209
BLAST of mRNA_S-dermatodea_contig12773.1695.1 vs. uniprot
Match: F0Y3A2_AURAN (SPRY domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3A2_AURAN) HSP 1 Score: 88.2 bits (217), Expect = 1.580e-17 Identity = 67/171 (39.18%), Postives = 87/171 (50.88%), Query Frame = 1
Query: 148 GKDVVVE----GGRISGTGIALGCAPVEQDSAYWEATIVSLPPDGTVSLGVSRRPPPGDDSEALLGSSKLGDAEKTWGFCTSDGGAAATIKEGDVIGIALDFTDLPMLFFASGGVPLGQGDELAVMRIRGTVYPAVGVGGGAVVSVAFAAGSLAHPPPRKCQALVVGQDMI 648
G DV VE G + G+G+A +EQD+AYWE + + G +GV R + EA LG +LGD + +W + AAA EGDVIG+A +LP L F G L G V RIRG V+PA V GGA + F + H PPR AL V Q++I
Sbjct: 33 GGDVSVESSATGDALGGSGVAYTSTAIEQDAAYWELHVEAA---GPFRVGVCR-----ELGEAQLGG-ELGDGQTSWALDS----AAAGAVEGDVIGVAFGQAELPNLSFFLNGELLEHG---MVNRIRGEVFPAASVTGGAKLRCVFDEANFEHAPPRTHSALRVTQNII 187
BLAST of mRNA_S-dermatodea_contig12773.1695.1 vs. uniprot
Match: K0T616_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T616_THAOC) HSP 1 Score: 73.2 bits (178), Expect = 1.430e-11 Identity = 66/209 (31.58%), Postives = 92/209 (44.02%), Query Frame = 1
Query: 22 MGCCESIMRVVLGSNSGGGGKGGIELGSSSTGTPFTMHGTLRGKD---VVVEGGRISGTGIALGCAPVEQDSAYWEATI------------------VSLPPDG-----TVSLGVSRRPPPGDDSE---ALLGSSKLGDAEKTWGFCTSDGGAAATIKEGDVIGIALDFTDLPMLFFASGGVPLGQGDELAVMRIRGTVYPAVGVGGGA 561
MG C S + G G + +S+ G P HG R + ++G ++SG+G+AL PVEQD+AYWE + V + DG V GV+ R D E +L + GD + T + ++ GDVIG+AL +DLPM+ G PL E + R RGTVYPAV + GA
Sbjct: 1 MGACCSCFDAITGGKHSGESSQEMTTRNSARGVPPASHGLSRAMSAPTISIQGFKVSGSGLALTRIPVEQDAAYWEIHVSIPGQTAPSGDEDGDLQDVDVNDDGEEDPYAVKFGVATR----KDREFYRSLETVEEEGDQASSRDDGTFLMRPISNLRHGDVIGVALQQSDLPMIQILLNGEPLL---ECIINRFRGTVYPAVYMPAGA 202
BLAST of mRNA_S-dermatodea_contig12773.1695.1 vs. uniprot
Match: A0A1Z5JFB4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFB4_FISSO) HSP 1 Score: 64.7 bits (156), Expect = 7.580e-9 Identity = 47/124 (37.90%), Postives = 65/124 (52.42%), Query Frame = 1
Query: 175 RISGTGIALGCAPVEQDSAYWEATIVSLPP-DGTVSLGVSRRPPPGDDSEALLGSSKLGDAEKTWGFCTSDGGAAATIKEGDVIGIALDFTDLPMLFFASGGVPLGQGDELAVMRIRGTVYPAV 543
++SG G+ L VEQD+AYWEA I P VS GV+ + + S + D+ G + +K+GDV+GIA+ +DLPM+ F G PL +LAV R RG VYPA+
Sbjct: 49 KMSGYGLGLVGVAVEQDAAYWEAHIQHDPGMSQEVSFGVATK-----KDQQFYRSMEEQDSADAKGTSLM---RSIKVKDGDVVGIAVQQSDLPMVQFLLNGEPL---HDLAVNRFRGAVYPAI 161
BLAST of mRNA_S-dermatodea_contig12773.1695.1 vs. uniprot
Match: B8BUW6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUW6_THAPS) HSP 1 Score: 65.9 bits (159), Expect = 1.770e-8 Identity = 60/205 (29.27%), Postives = 90/205 (43.90%), Query Frame = 1
Query: 25 GCC---ESIMRVVLGSNSGGGGKGGIELGS--SSTGTPFTMHGTLRGKD---VVVEGGRISGTGIALGCAPVEQDSAYWEATI----VSLPPDG--------------------TVSLGVSRRPPPGDDSEALLGSSKLGDAEKTWGFCTSDGGAAATIKEGDVIGIALDFTDLPMLFFASGGVPLGQGDELAVMRIRGTVYPAV 543
GCC + I G++SG E+ + S G P HG R + ++G ++SG+G+AL P+EQD+AYWE + + PP + GV+ R + + L GD + T+ A ++ DVIG+A+ +DLPM+ F G PL E + R RGTV+PAV
Sbjct: 3 GCCSCFDGITGGKHGNDSGNSDGKSTEMATRNSIAGVPPPTHGVSRAMSAPTIQIQGYKVSGSGLALAKIPIEQDAAYWEWHVHLPGLPRPPXXXXXXDEFHDVQMNGESDDPYAIKFGVATRKDR-NFYKLLQNVEDEGDETSSQDDGTALMRAIPNLRHNDVIGVAVQQSDLPMIQFLLNGEPL---PECTINRFRGTVFPAV 203
BLAST of mRNA_S-dermatodea_contig12773.1695.1 vs. uniprot
Match: A0A7S2PAN9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PAN9_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 6.660e-8 Identity = 48/127 (37.80%), Postives = 66/127 (51.97%), Query Frame = 1
Query: 169 GGRISGTGIALGCAPVEQDSAYWEATI-VSLPPDGTVSLGVSRRPPPGDDSEALLGSSKLGDAEKTWGFCTSDGGAAATIKEGDVIGIALDFTDLPML-FFASGGVPLGQGDELAVMRIRGTVYPAV 543
G + G G+AL VEQ+S YWE + P TV +GVS R E L SS + T CT A+ +K+GDVIGI + ++LPM+ + +G + D L V R RGTVYP++
Sbjct: 88 GNEVKGYGLALTDVSVEQESCYWEWRVRTGGNPTVTVMVGVSNRRN-SKFYEILASSSVPPEQHGTKFMCT-----ASDLKDGDVIGIVVQQSELPMIQLYVNGEIE----DGLQVTRFRGTVYPSI 204
BLAST of mRNA_S-dermatodea_contig12773.1695.1 vs. uniprot
Match: A0A836CE96_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE96_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.370e-7 Identity = 49/134 (36.57%), Postives = 64/134 (47.76%), Query Frame = 1
Query: 250 VSLPPDGTVSLGVSRRPPPGDDSEALLGSSKLGDAEKTWGFCTSDGGAAATIKEGDVIGIALDFTDLPMLFFASGGVPLGQGDELA-VMRIRGTVYPAVGVGGGAVVSVAFAAGSLAHPPPRKCQALVVGQDMI 648
V++ GT+ LGV D + L S A+ +WGF G V+GI ++++ LPM+ G E+A V R+RGTVYPAV V GGA V F G PRKC AL +DMI
Sbjct: 1 VTIQKPGTIGLGVLWHTNATDLAAVTLSDS----ADGSWGFTRE----YTEADVGTVLGICVNWSALPMMRLLDAA-----GAEVASVRRVRGTVYPAVTVRGGAACDVRF--GGFEGVVPRKCTALTRVKDMI 119 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12773.1695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12773.1695.1 >prot_S-dermatodea_contig12773.1695.1 ID=prot_S-dermatodea_contig12773.1695.1|Name=mRNA_S-dermatodea_contig12773.1695.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=210bp MGCCESIMRVVLGSNSGGGGKGGIELGSSSTGTPFTMHGTLRGKDVVVEGback to top mRNA from alignment at S-dermatodea_contig12773:1066..6130- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12773.1695.1 ID=mRNA_S-dermatodea_contig12773.1695.1|Name=mRNA_S-dermatodea_contig12773.1695.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5065bp|location=Sequence derived from alignment at S-dermatodea_contig12773:1066..6130- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12773:1066..6130- >mRNA_S-dermatodea_contig12773.1695.1 ID=mRNA_S-dermatodea_contig12773.1695.1|Name=mRNA_S-dermatodea_contig12773.1695.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1260bp|location=Sequence derived from alignment at S-dermatodea_contig12773:1066..6130- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |