mRNA_S-dermatodea_contig8795.16931.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8795.16931.1
Unique NamemRNA_S-dermatodea_contig8795.16931.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8795.16931.1 vs. uniprot
Match: A0A6H5KDE6_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDE6_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 1.220e-125
Identity = 176/279 (63.08%), Postives = 223/279 (79.93%), Query Frame = 1
Query:    1 QFPTSTWLSESIEAILSRDTKLKYIVYSHAHWDHVGAAGLVYDHFAQRDGNPATIIASKRTRRELNSKDRR-DPNTVFGNSRGVVIPDKMEGKDYKYLALGGLTFEIEKIHAHQAGDLVVLLDKGDSGNAAQGIATSILMVVDTVFPGWIPFYLLALTQDVGGYYDALEEINGYDFDVFVGGHLTRLGTKADIQVKIDFYADVLAGAEAAIAAVSVADVVAGTGVFEASNPNLGNNWLLFNEIFARQTDVCEAYVLDSSSRGRDWLAELGGVDITLRSQ 834
            +FPT+TWLSESIEAIL+  TKLKYI+Y+H+HWDH+G AGLVY+HFA+   NP TII SKR R +L ++D R DP ++ GN+RGV IP+K++  DY+ L +GGL FE++K+HAH+ GDLVV LDK    NAA+GI TS+  VVD +FPGW+PF+ +A + ++GGYYDA++EI  YD DV VGGHL+R+GTKAD+Q+  DFY DVL GA   +  VSVADV++GTGVF+ SNPN GN WLL NE+  R  DVCEAYVLDS SRGRDWLAE+GG+D+TLRSQ
Sbjct:   28 EFPTATWLSESIEAILAPGTKLKYILYTHSHWDHIGTAGLVYEHFAE--DNP-TIITSKRIRAKLKARDDRGDPTSIHGNNRGVPIPEKLDEADYRELQVGGLRFEVQKLHAHERGDLVVFLDKNLPANAAEGIDTSVFFVVDVIFPGWVPFFSVAASSEIGGYYDAMDEILSYDMDVLVGGHLSRMGTKADVQLNKDFYDDVLEGARTGVTTVSVADVISGTGVFDPSNPNAGNLWLLNNELIDRNVDVCEAYVLDSVSRGRDWLAEMGGLDVTLRSQ 303          
BLAST of mRNA_S-dermatodea_contig8795.16931.1 vs. uniprot
Match: D8LEX6_ECTSI (Beta-lactamase domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX6_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 4.240e-104
Identity = 155/246 (63.01%), Postives = 187/246 (76.02%), Query Frame = 1
Query:   97 DHVGAAGLVYDHFAQRDGNPATIIASKRTRRELNSKDRRDPNTVFGNSRGVVIPDKMEGKDYKYLALGGLTFEIEKIHAHQAGDLVVLLDKGDSGNAAQGIATSILMVVDTVFPGWIPFYLLALTQDVGGYYDALEEINGYDFDVFVGGHLTRLGTKADIQVKIDFYADVLAGAEAAIAAVSVADVVAGTGVFEASNPNLGNNWLLFNEIFARQTDVCEAYVLDSSSRGRDWLAELGGVDITLRSQ 834
            DH+G AG V DHFA    N  TIIASKR R +L SKD RDP +VFGN+RGV IP+K+E  +Y+ L++GGL FE++KIHAHQ GDL + LDK    NAA GI TS+ MVVDTVFPGWIP +   L  DV  YY+A++ I GYDFDV + GHLTR+GTKAD+Q+  D +AD+L GA A  AAVS ADV AGT V + +NPN GN WLLF E+ ARQTD+C AYVLDS+SRGRDWLAE+ GVD+TLR+Q
Sbjct:    5 DHIGGAGFVSDHFAH---NNPTIIASKRIRHDLKSKDDRDPTSVFGNNRGVPIPEKLEAAEYRELSVGGLRFELQKIHAHQPGDLFIFLDKSVPENAAAGIDTSVFMVVDTVFPGWIPLFPTNLNPDVASYYEAMDVILGYDFDVLMAGHLTRMGTKADVQLNRDLFADILEGATAGFAAVSQADVGAGTAVSDPTNPNAGNVWLLFTELIARQTDMCAAYVLDSASRGRDWLAEVAGVDLTLRTQ 247          
BLAST of mRNA_S-dermatodea_contig8795.16931.1 vs. uniprot
Match: D8LKQ6_ECTSI (Beta-lactamase domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ6_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 3.000e-76
Identity = 129/247 (52.23%), Postives = 159/247 (64.37%), Query Frame = 1
Query:   97 DHVGAAGLVYDHFAQRDGNPATIIASKRTRRELNSKDRR-DPNTVFGNSRGVVIPDKMEGKDYKYLALGGLTFEIEKIHAHQAGDLVVLLDKGDSGNAAQGIATSILMVVDTVFPGWIPFYLLALTQDVGGYYDALEEINGYDFDVFVGGHLTRLGTKADIQVKIDFYADVLAGAEAAIAAVSVADVVAGTGVFEASNPNLGNNWLLFNEIFARQTDVCEAYVLDSSSRGRDWLAELGGVDITLRSQ 834
            DH+G AGLVY+HFA    NP TII SKR R ++ ++D R DP ++ GN+RGV IP K++  DY+ L +GGL FE+ K+HAH+ GDLVV LDK    NAA+G                                        YD DV VGGHL+R+GTKAD+Q+  DFY DVL GA   +  VSVADV++GTGVF+ SNPN GN WL+ NE+  R  DVCEAYVLDS SRGRDWLAE+GG+D+TLRSQ
Sbjct:   24 DHIGTAGLVYEHFAA--DNP-TIITSKRIRAKIKARDDRGDPTSIHGNNRGVPIPQKLDEADYRELQVGGLRFEVRKLHAHERGDLVVFLDKNLPENAAEG----------------------------------------YDMDVLVGGHLSRMGTKADVQLNKDFYDDVLKGARTGVTTVSVADVISGTGVFDPSNPNAGNLWLINNELIDRHVDVCEAYVLDSVSRGRDWLAEMGGLDVTLRSQ 227          
BLAST of mRNA_S-dermatodea_contig8795.16931.1 vs. uniprot
Match: D7FY02_ECTSI (Beta-lactamase domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY02_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 8.100e-57
Identity = 97/172 (56.40%), Postives = 124/172 (72.09%), Query Frame = 1
Query:    1 QFPTSTWLSESIEAILSRDTKLKYIVYSHAHWDHVGAAGLVYDHFAQRDGNPATIIASKRTRRELNSKDRRDPNTVFGNSRGVVIPDKMEGKDYKYLALGGLTFEIEKIHAHQAGDLVVLLDKGDSGNAAQGIATSILMVVDTVFPGWIPFYLLALTQDVGGYYDALEEING 516
            +FP  TWL+ SI+A+LS  TKLKYIVY+H HWDH+GAAGLV ++FA    NP T IAS+RTR  +  +D +DPNTVFGN+RGV +P   E    + L +GGL F +EK +AHQ GDL+V LDK D  NA +GI ++I MV DTVF GW PFY + + QDV  + +AL+EING
Sbjct:   58 KFPNGTWLTASIDALLSEGTKLKYIVYTHRHWDHMGAAGLVVEYFAA--DNP-TAIASRRTRLAVKKRDTKDPNTVFGNNRGVPVP---EWYQEEVLEVGGLRFTLEKANAHQGGDLMVTLDKHDPQNAGEGIDSTIFMVTDTVFAGWAPFYSVNIVQDVSDFLEALDEING 223          
BLAST of mRNA_S-dermatodea_contig8795.16931.1 vs. uniprot
Match: UPI00190F37E6 (MBL fold metallo-hydrolase n=1 Tax=Candidatus Halocyntiibacter alkanivorans TaxID=2267619 RepID=UPI00190F37E6)

HSP 1 Score: 120 bits (301), Expect = 1.940e-28
Identity = 87/259 (33.59%), Postives = 125/259 (48.26%), Query Frame = 1
Query:   55 DTKLKYIVYSHAHWDHVGAAGLVYDHFAQRDGNPATIIASKRTRRELNSK---DRRDPNTVFGNSRGVVIPDKMEGKDYKYLALGGLTFEIEKIHAHQAGDLVVLLDKGDSGNAAQGIATSILMVVDTVFPGWIPFYLLALTQDVGGYYDALEEINGYDFDVFVGGHLTRLGTKADIQVKIDFYADVLAGAEAAIAAVSVADVVAGTGVFEASNPNLGNN-WLLFNEIFARQTDVCEAYVLDSSSRGRDWLAELGGVDI 819
            D  + +++YSH+H DH+GAA L         G   TIIA + T R L  K   +R  P  VF +S  + I  ++   DY      G+         H  G++ +   K             +LM+VD VFPGW PF  LAL +DV G++ A +++  Y+FD F+GGHLTRLGT+AD++ +I ++ D++  A  A  A+       G    EA     GNN W +    F R    C   V         W+  LGGVD+
Sbjct:  100 DEPITHVIYSHSHGDHIGAASLY--------GPGVTIIAQQETARHLTEKQDPNRPVPTQVFDDSLTLNIGTQVLQLDYL-----GVN--------HNPGNIFIYAPK-----------QKVLMLVDVVFPGWTPFPDLALAEDVEGFFAAQDQVLTYEFDNFIGGHLTRLGTRADVETQIAYFDDIVVAAGKANGAMDF-----GAAFGEAMERGGGNNIWAVVKIAFDRVARQCADEV------EAKWMDRLGGVDV 315          
BLAST of mRNA_S-dermatodea_contig8795.16931.1 vs. uniprot
Match: A0A654LUP5_9ARCH (Carbapenem-hydrolyzing beta-lactamase BlaB-1 n=1 Tax=Candidatus Nitrosocosmicus oleophilus TaxID=1353260 RepID=A0A654LUP5_9ARCH)

HSP 1 Score: 120 bits (302), Expect = 2.540e-28
Identity = 79/236 (33.47%), Postives = 119/236 (50.42%), Query Frame = 1
Query:   55 DTKLKYIVYSHAHWDHVGAAGLVYDHFAQRDGNPATIIASKRTRREL---NSKDRRDPNTVFGNSRGVVIPDKMEGKDYKYLALGGLTFEIE-KIHAHQAGDLVVLLDKGDSGNAAQGIATSILMVVDTVFPGWIPFYLLALTQDVGGYYDALEEINGYDFDVFVGGHLTRLGTKADIQVKIDFYADVLAGAEAAIAAVSVADVVAGTGVFEASNPNLGNNWLLFNEIFARQTDVC 750
            D  +KY++YSH+H DH+GAAG +Y        +  TI+A + T + L   N  +R  P   F              KD   L LG  T E++ K   H+ G+  +      +           LM VD +FPGW+PF  LA+T++V G+  A + ++ YDFD  VGGHLTRLGT  D++++ +F  D++  ++ A + ++  D V+  G        L N WL F+E     TD C
Sbjct:  137 DKPIKYVIYSHSHIDHIGAAGNIYP-------DNVTIVAQEETAKLLKIANDSNRPIPTVTF--------------KDNYNLTLGNQTLELDYKGVNHEPGNTYIYAPNQKT-----------LMFVDVIFPGWVPFKDLAITKNVSGFVQAHDIVSSYDFDTLVGGHLTRLGTMEDVKIQKEFITDLINASKTANSKINFMDFVSKYG--------LTNPWLTFSEYADAVTDEC 332          
BLAST of mRNA_S-dermatodea_contig8795.16931.1 vs. uniprot
Match: A0A838D836_9ARCH (MBL fold metallo-hydrolase n=2 Tax=Thaumarchaeota TaxID=651137 RepID=A0A838D836_9ARCH)

HSP 1 Score: 119 bits (299), Expect = 6.840e-28
Identity = 83/258 (32.17%), Postives = 126/258 (48.84%), Query Frame = 1
Query:   55 DTKLKYIVYSHAHWDHVGAAGLVYDHFAQRDGNPATIIASKRTRREL---NSKDRRDPNTVFGNSRGVVIPDKMEGKDYKYLALGGLTFEIE-KIHAHQAGDLVVLLDKGDSGNAAQGIATSILMVVDTVFPGWIPFYLLALTQDVGGYYDALEEINGYDFDVFVGGHLTRLGTKADIQVKIDFYADVLAGAEAAIAAVSVADVVAGTGVFEASNPNLGNNWLLFNEIFARQTDVCEAYVLDSSSRGRDWLAELGGVD 816
            D  ++Y+VYSH+H DH+GAAG ++        N  TI++ + T + L   N  +R  P   F              KD   L LG  T E++ K   H+ G++ +      +           LM+VD +FPGW+PF  LA+T +V G+  A + ++ YDFD  VGGHLTRLG   D+ ++ +F  D++  ++AA + ++  D V+  G        L N WL F+E     TD C   +L        W   LGG +
Sbjct:  137 DKPIRYVVYSHSHIDHIGAAGNIFP-------NNITIVSQEETAKLLKIANDSNRPIPTIAF--------------KDNYNLTLGNQTLELDYKGVNHEPGNIYIYAPSQKT-----------LMLVDVIFPGWVPFKDLAITTNVPGFVQAHDIVSSYDFDTLVGGHLTRLGNVEDVNIQKEFITDLVNASKAANSKINFMDYVSKYG--------LTNPWLTFSEYSDAVTDECTNTMLAK------WKDRLGGAE 348          
BLAST of mRNA_S-dermatodea_contig8795.16931.1 vs. uniprot
Match: UPI001BDDF298 (MBL fold metallo-hydrolase n=1 Tax=Bacillus sp. SM2101 TaxID=2805366 RepID=UPI001BDDF298)

HSP 1 Score: 117 bits (294), Expect = 3.020e-27
Identity = 82/256 (32.03%), Postives = 119/256 (46.48%), Query Frame = 1
Query:   55 DTKLKYIVYSHAHWDHVGAAGLVYDHFAQRDGNPATIIASKRTRRELNSKDRRDPNTVFGNSRGVVIPDKMEGKDYKYLALGGLTFEIEKI-HAHQAGDLVVLLDKGDSGNAAQGIATSILMVVDTVFPGWIPFYLLALTQDVGGYYDALEEINGYDFDVFVGGHLTRLGTKADIQVKIDFYADVLAGAEAAIAAVSVADVVAGTGVFEASNPNLGNNWLLFNEIFARQTDVCEAYVLDSSSRGRDWLAELGGVDI 819
            D  +KY++Y+HAH DH+GAA L  D           I A + T + L  + R+DPN          IP K      K L LG     ++ +   HQ G++ + +               +LM VD +FPGW+PF  LAL++D+ GY +A  +I  YDFD  V GH+TRLGT+ D+Q +ID+  DV   AE A+    +  +          N    N W L +  +      C    +        W+ +LGG DI
Sbjct:  127 DEPIKYLIYTHAHKDHIGAASLFPD--------DVEIFAHEETAKIL--EKRQDPNRP--------IPTKPFKGSQKKLKLGNKELLLDYMGDNHQRGNIFIYVPD-----------QKVLMAVDIIFPGWVPFRYLALSEDIPGYIEAHAKIMEYDFDTLVAGHVTRLGTREDVQTQIDYMNDVQKNAENALKTTDLNAI--------GQNVGFENPWHLMDVYYDEMIKSCNDATVPK------WIDKLGGADI 339          
BLAST of mRNA_S-dermatodea_contig8795.16931.1 vs. uniprot
Match: UPI00082BE0C9 (MBL fold metallo-hydrolase n=1 Tax=Erythrobacter sp. CCH5-A1 TaxID=1768792 RepID=UPI00082BE0C9)

HSP 1 Score: 117 bits (293), Expect = 3.670e-27
Identity = 89/269 (33.09%), Postives = 130/269 (48.33%), Query Frame = 1
Query:   22 LSESIEAILSRDTKLKYIVYSHAHWDHVGAAGLVYDHFAQRDGNPATIIASKRTRREL-NSKDRRDPNTVFGNSRGVVIPDKMEGKDYKYLALGGLTFEIEKIHA-HQAGDLVVLLDKGDSGNAAQGIATSILMVVDTVFPGWIPFYLLALTQDVGGYYDALEEINGYDFDVFVGGHLTRLGTKADIQVKIDFYADVLAGAEAAIAAVSVADVVAGTGVFEASNPNLGNNWLLFNEIFARQTDVCEAYVLDSSSRGRDWLAELGGVDIT 822
            LS++I A  + D  +  ++Y+H+H DH+GAA    D F    G     IAS  TR +L    D R P           +P ++ G     +  G    +++   A H+ G+L+VL  +G            +LM+VD V+PGW+PF  L + +DV G+ DA + + GYDF VFVGGHL+R GT+AD++    +  D++A A AA   V    V   TG          N WLL      R  D C A +L        W  +LGG  ++
Sbjct:   95 LSQAIAA--TTDKPVIAVIYTHSHIDHIGAA----DQF----GPDVQRIASVPTRDKLARLADPRRP-----------VPTQVVGAGSTRMRFGTTEVQLDLAGAFHEPGNLIVLFPQG-----------KVLMMVDIVYPGWVPFTNLGMAEDVQGFIDAHDVLLGYDFAVFVGGHLSRPGTRADVETAKTYVTDLVAAARAAQGKVDFLAVAGETG--------FANRWLLVKTWMDRVADACTATMLGK------WEGKLGGASVS 317          
BLAST of mRNA_S-dermatodea_contig8795.16931.1 vs. uniprot
Match: A0A3E0C2F1_9BURK (Glyoxylase-like metal-dependent hydrolase (Beta-lactamase superfamily II) n=2 Tax=Paraburkholderia sp. BL6669N2 TaxID=1938807 RepID=A0A3E0C2F1_9BURK)

HSP 1 Score: 115 bits (289), Expect = 1.120e-26
Identity = 88/255 (34.51%), Postives = 126/255 (49.41%), Query Frame = 1
Query:   64 LKYIVYSHAHWDHVGAAGLVYDHFAQRDGNPATIIASKRTRRELNSKDRRDPNTVFGNSRGVVIPDKMEGKDYKYLALGGLTFEIEKIHA--HQAGDLVVLLDKGDSGNAAQGIATSILMVVDTVFPGWIPFYLLALTQDVGGYYDALEEINGYDFDVFVGGHLTRLGTKADIQVKIDFYADVLAGAEAAIAAVSVADVVAGTGVFEASNPNLGNNWLLFNEIFARQTDVCEAYVLD-SSSRGRDWLAELGGVDI 819
            +KY+VYSH+H+DH+GAA L Y   A R  + +T     R         R  PN VF              KD   L +GG   E+ + H   HQ G++ +         AAQ +    LM+VD +FPGW+PF  LA+  DV  +  A E +  YDFDV V GHLTR GT+AD++ + ++  ++ A ++ A+A V + DV + TG          N W L +       ++    VL  S+S GR W   L G D+
Sbjct:  101 IKYVVYSHSHFDHIGAANL-YPDSAIRIAHSSTADLLAR----YADSHRPVPNIVF--------------KDEYVLEVGGRKLEL-RYHGNIHQPGNIFIY-------EAAQRV----LMLVDVIFPGWVPFRNLAVANDVHEFIKAHETVLAYDFDVMVCGHLTRPGTRADVEAQREYVQNLRAASKNALATVKIEDVGSRTG--------FDNLWALMDGYLNDMIEMATRTVLTVSTSDGRLWSERLAGADV 316          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8795.16931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDE6_9PHAE1.220e-12563.08Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
D8LEX6_ECTSI4.240e-10463.01Beta-lactamase domain protein n=1 Tax=Ectocarpus s... [more]
D8LKQ6_ECTSI3.000e-7652.23Beta-lactamase domain protein n=1 Tax=Ectocarpus s... [more]
D7FY02_ECTSI8.100e-5756.40Beta-lactamase domain protein n=1 Tax=Ectocarpus s... [more]
UPI00190F37E61.940e-2833.59MBL fold metallo-hydrolase n=1 Tax=Candidatus Halo... [more]
A0A654LUP5_9ARCH2.540e-2833.47Carbapenem-hydrolyzing beta-lactamase BlaB-1 n=1 T... [more]
A0A838D836_9ARCH6.840e-2832.17MBL fold metallo-hydrolase n=2 Tax=Thaumarchaeota ... [more]
UPI001BDDF2983.020e-2732.03MBL fold metallo-hydrolase n=1 Tax=Bacillus sp. SM... [more]
UPI00082BE0C93.670e-2733.09MBL fold metallo-hydrolase n=1 Tax=Erythrobacter s... [more]
A0A3E0C2F1_9BURK1.120e-2634.51Glyoxylase-like metal-dependent hydrolase (Beta-la... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8795contigS-dermatodea_contig8795:4743..8199 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score316.6
Seed ortholog evalue1.1e-83
Seed eggNOG ortholog2880.D8LEX6
EggNOG OGs2CJFE@1,2SA2M@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size834
Cds size834
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8795.16931.1prot_S-dermatodea_contig8795.16931.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8795 4743..8199 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925367.0230904-CDS-S-dermatodea_contig8795:4742..48691622925367.0230904-CDS-S-dermatodea_contig8795:4742..4869Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 4743..4869 -
1694079885.1899436-CDS-S-dermatodea_contig8795:4742..48691694079885.1899436-CDS-S-dermatodea_contig8795:4742..4869Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 4743..4869 -
1622925367.0370276-CDS-S-dermatodea_contig8795:5289..54821622925367.0370276-CDS-S-dermatodea_contig8795:5289..5482Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 5290..5482 -
1694079885.200538-CDS-S-dermatodea_contig8795:5289..54821694079885.200538-CDS-S-dermatodea_contig8795:5289..5482Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 5290..5482 -
1622925367.047041-CDS-S-dermatodea_contig8795:6268..63391622925367.047041-CDS-S-dermatodea_contig8795:6268..6339Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 6269..6339 -
1694079885.2106082-CDS-S-dermatodea_contig8795:6268..63391694079885.2106082-CDS-S-dermatodea_contig8795:6268..6339Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 6269..6339 -
1622925367.056555-CDS-S-dermatodea_contig8795:6550..65991622925367.056555-CDS-S-dermatodea_contig8795:6550..6599Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 6551..6599 -
1694079885.2214358-CDS-S-dermatodea_contig8795:6550..65991694079885.2214358-CDS-S-dermatodea_contig8795:6550..6599Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 6551..6599 -
1622925367.0682275-CDS-S-dermatodea_contig8795:7356..76541622925367.0682275-CDS-S-dermatodea_contig8795:7356..7654Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 7357..7654 -
1694079885.231745-CDS-S-dermatodea_contig8795:7356..76541694079885.231745-CDS-S-dermatodea_contig8795:7356..7654Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 7357..7654 -
1622925367.079542-CDS-S-dermatodea_contig8795:8103..81991622925367.079542-CDS-S-dermatodea_contig8795:8103..8199Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 8104..8199 -
1694079885.2479522-CDS-S-dermatodea_contig8795:8103..81991694079885.2479522-CDS-S-dermatodea_contig8795:8103..8199Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8795 8104..8199 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8795.16931.1

>prot_S-dermatodea_contig8795.16931.1 ID=prot_S-dermatodea_contig8795.16931.1|Name=mRNA_S-dermatodea_contig8795.16931.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=278bp
QFPTSTWLSESIEAILSRDTKLKYIVYSHAHWDHVGAAGLVYDHFAQRDG
NPATIIASKRTRRELNSKDRRDPNTVFGNSRGVVIPDKMEGKDYKYLALG
GLTFEIEKIHAHQAGDLVVLLDKGDSGNAAQGIATSILMVVDTVFPGWIP
FYLLALTQDVGGYYDALEEINGYDFDVFVGGHLTRLGTKADIQVKIDFYA
DVLAGAEAAIAAVSVADVVAGTGVFEASNPNLGNNWLLFNEIFARQTDVC
EAYVLDSSSRGRDWLAELGGVDITLRSQ
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mRNA from alignment at S-dermatodea_contig8795:4743..8199-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8795.16931.1 ID=mRNA_S-dermatodea_contig8795.16931.1|Name=mRNA_S-dermatodea_contig8795.16931.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3457bp|location=Sequence derived from alignment at S-dermatodea_contig8795:4743..8199- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGTTCCCCACGAGTACGTGGCTCTCCGAGTCGATTGAGGCCATCCTTTC CCGCGACACCAAACTCAAGTACATCGTCTACTCACACGCGCACTGGGTAC GTTATACTACGATATTAAGATATTACCTAGCAGCTGGAATGTTTCGTAGG CGTACTGTCGGAGCTGGTGCGTCATAGAGAGGAAGCAGAGTCGTAAAGAA AAGCCAAGACCCCCCCAGTTCCCCCATCTCTTCTTGTAGTTAGTTGTTGA TGGACCCTAGAAATTTCTTCCCCGTCGATAGGCCGTTTGCAAGGAGCTGT AAGTCGTGAAGAATGCCTTTCGGACCTTGCAAACTGGTTTGTTTTGCAGT TGAACATGTACCCTTGTACTTCAGAGGTCCAAGGTCTGCACGACATTCTC TAAAGGCGAGCAAGGAAAAAGATTGCGTCTCGCATCGTACTCCGGCTGCT TCCCACAAAGCTTCTTCTTGAGTCAACGTTATTGACCGTTGTCATCGCAA ATATTTTGTTTGCACACCGTGCCCGTAATGAAAAACAAAAAAAAGGATCA CGTGGGTGCCGCTGGTCTAGTGTACGACCACTTCGCGCAGCGGGACGGCA ACCCTGCTACCATCATCGCCTCTAAGCGCACCAGGAGGGAGTTGAACAGC AAAGACAGGCGTGACCCCAACACTGTCTTCGGCAACAGTCGCGGTGTTGT TATCCCAGACAAGATGGAGGGAAAAGACTACAAGTACCTTGCATTGGGTG GGCTCACCTTCGAGATTGAGAAGATCCACGCTCATCAGGCCGGGGACTTG GTGGTATTGCTCGACAAGGGAGACTCGGGCAATGCGGCTCAAGGTGCGCT CAAGGGAACACATTGTTGTTTGTTGGGGCGGGCAGTGACCGTGGCCCCTT TGTAAAGCTCACCGAAGCCATCACATCTCGGTGACGGCGTTTGTGTCAGA TGCTCCTTGGTCGCCATCCACCGCCCAAATTCGATTCCTCAACTTCGACC GTTTCGTATACAACGTTCCCTGCCGTATCGGGTGATGTAGCGAGGGTGGC TTGTAATGTTTGCACCTCGCCCCTCCGCACGATGACCCTCAAGCTTCAGC CCGGCGGATAACTCATGCTACATACTTTTCGCCTGCGTGACATGCAAAAG GTTGGTTTGGTTGAGGGTGAGTATCATGTGTCGGCGGCGATAAGCAGTGC ATTGCATTGCTGTTATTGCGTCGTTTTCGAGTTTTTGTCGGGTGGAGAGA GGAACTGGCTTGGCTGCGCGTAGTGCTTCGTCAGCTCTCGAAGGGTTTCA ACATGTGCAATCCATAGGAAATCCTTTTTGTAACGACCCTTCAACCTCCA CAAAGGCACTAGTCAGTACTCGCCCATTAGCTTGGAACTGTGCAAACATG ACCCTATCATTAATCACAAGCTATTCCTAGAGTATTCTCTTTAAATGTGT TCCGGTGAAGCCGCGAAGGAAGAAGTGGCGACCTCGTTCTCTGTCGTTTA TTTTCTCCTAGCTTCCTGGGCGCTTGTACCACGTACATCCTAAGCAACGC TCCTCTGTTGTTCCAATTCCAAAATTTGTTCTTCGCCCTGCACATTACAG GTATCGCTACAAGTATCCTCATGGTCGTCGACACCGTCTTCCCGGGCTGG TAAGTCCTTACCGACCAATTTTTCAATCCACATTCATACGGAGAGAAAGC TGAAGAAAATGTTGCAGATTCAACCACGTACTCTCATGGTTGTATCCGCG AGCGTTTGATGTATTGCCTGCTGAAGATTTGTCCCCTGGGCTCGTCGATG TTGGACACAAAAATCACGAATCACCCGTCCCACCCTCCTGTCGCTCTGGT GTATTCACAGGATTCCTTTCTACCTTTTGGCTCTTACCCAGGACGTCGGG GGATACTACGACGCCCTCGAAGAAATCAACGGTAAGCAAACAATGGGAAC GCCTCACATCACTGTACATCCCGTAGACAGGTTCTCTTGCTTGTTGTTTT TGTCGGTATCTGAACTCCCGCGGTCTCGAGGTTGATCCCCTTTCCTTCCG TCTCATTCTCCGCGCTTCGCGTCGATTGGGCGCCGTGCTTCCGCCGCTCA ACGCCAGTTTACTCGGGTTGTCGGGGAACGTGTAGTTCCCCCCCAAAATG CGTTCATACCAACAGCAGGTTTCATGCCTATACATGGAATTTGCGCGGGA CTCAGGACTGACATGGCCCCTGTACCATAACGCTTGTTCTACAAATATTA TGTTTTAACTCTAGCACCAATGGAAATCGCGCTTCACTGCGTTTTGTTCC CTTGTGTTGACCCTTGGTGTGGCCGCGGGAAGAAGCGTGTACGTCGGCAG CCTATCCTCCTCGAGACGGCACGTTTGATTAAAGTAATCTGAGGTGCTGT TCCCTGGAAACCTTGGCGCAAAGATGCTTGGTCGATGTGTTCGCGTCTCA ACCTGTTGCCCGTTTCGGTGTCACACCATTGCCGACGGTGACAAGTTCAC AGACAGCTACGTGTATCCCTCAAGCAAGGTCTGAGCCCCTGATCTCACGC GCTGACCCGTAAGAGCGAGCTTGTTGCCCGCAACCACAGAAAACGAGCTA GCTCGGGTAAACGCTGACCTCACGCATCCCTCCCTTGCTCCTGCTTTTCT CCCCCCGCCCCGCGCCCCCCGCCGGCGCGCGCCTCATCTTTCCGACACAA ACGGACGGGAACCACAGGCTACGACTTCGACGTGTTCGTGGGTGGGCACC TCACTCGCCTGGGTACAAAGGCGGACATACAGGTGAAGATAGACTTCTAC GCCGACGTTCTCGCGGGGGCGGAGGCCGCCATCGCGGCGGTTTCCGTGGC CGACGTCGTTGCCGGCACCGGGGTTTTCGAGGCCAGCAACCCCAACCTTG GAAACAACTGGTGCGTATGTTCGTTTCGCGTTGTTGCCTCTTGCGCATAT TTGATTGGTTTGTTGATTCTGTGCGACACTTCCACATCCCCGGTTGAAGT ATATCAATACCAGGTCAAGATTTCTTCAAAACATATAATAATACCTCATG ACGGTTGGCCTTAATGTATAACCGTCATGGCTCAACGTACGTGTCAAACA ACGAGTGACACGCTACCTACTAGCATCACCTCTACGGCGCATTGAAGCAG GGGAACTTCCTGACTTTCAATGTAAAGCAGGACGCATTGCTACAATTTTG TCACTCGCCGCGCGCTTGTGCCATGTTCATAGTGACAAGCCAACGGATGG CATGTAGAGCTTGACAGGAGGTCCAATGCCCGCGCTTTGCCCCGCCATTT TCGCCTTCCTTCGGTGTCGCGAATTACCAGGCTCCTTTTCAACGAGATTT TCGCGCGCCAGACGGACGTATGCGAGGCCTACGTGTTGGACTCGAGTTCT CGCGGGAGAGACTGGCTCGCCGAATTGGGCGGGGTCGACATCACGCTCCG CTCTCAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8795:4743..8199-

>mRNA_S-dermatodea_contig8795.16931.1 ID=mRNA_S-dermatodea_contig8795.16931.1|Name=mRNA_S-dermatodea_contig8795.16931.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1668bp|location=Sequence derived from alignment at S-dermatodea_contig8795:4743..8199- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGTTCCCCACGAGTACGTGGCTCTCCGAGTCGATTGAGGCCATCCTTTC
CCGCGACACCAAACTCAAGTACATCGTCTACTCACACGCGCACTGGCAGT
TCCCCACGAGTACGTGGCTCTCCGAGTCGATTGAGGCCATCCTTTCCCGC
GACACCAAACTCAAGTACATCGTCTACTCACACGCGCACTGGGATCACGT
GGGTGCCGCTGGTCTAGTGTACGACCACTTCGCGCAGCGGGACGGCAACC
CTGCTACCATCATCGCCTCTAAGCGCACCAGGAGGGAGTTGAACAGCAAA
GACAGGCGTGACCCCAACACTGTCTTCGGCAACAGTCGCGGTGTTGTTAT
CCCAGACAAGATGGAGGGAAAAGACTACAAGTACCTTGCATTGGGTGGGC
TCACCTTCGAGATTGAGAAGATCCACGCTCATCAGGCCGGGGACTTGGTG
GTATTGCTCGACAAGGGAGACTCGGGCAATGCGGCTCAAGGATCACGTGG
GTGCCGCTGGTCTAGTGTACGACCACTTCGCGCAGCGGGACGGCAACCCT
GCTACCATCATCGCCTCTAAGCGCACCAGGAGGGAGTTGAACAGCAAAGA
CAGGCGTGACCCCAACACTGTCTTCGGCAACAGTCGCGGTGTTGTTATCC
CAGACAAGATGGAGGGAAAAGACTACAAGTACCTTGCATTGGGTGGGCTC
ACCTTCGAGATTGAGAAGATCCACGCTCATCAGGCCGGGGACTTGGTGGT
ATTGCTCGACAAGGGAGACTCGGGCAATGCGGCTCAAGGTATCGCTACAA
GTATCCTCATGGTCGTCGACACCGTCTTCCCGGGCTGGTATCGCTACAAG
TATCCTCATGGTCGTCGACACCGTCTTCCCGGGCTGGATTCCTTTCTACC
TTTTGGCTCTTACCCAGGACGTCGGGGGATACTACGACGCCCTCGAAGAA
ATCAACGGATTCCTTTCTACCTTTTGGCTCTTACCCAGGACGTCGGGGGA
TACTACGACGCCCTCGAAGAAATCAACGGCTACGACTTCGACGTGTTCGT
GGGTGGGCACCTCACTCGCCTGGGTACAAAGGCGGACATACAGGTGAAGA
TAGACTTCTACGCCGACGTTCTCGCGGGGGCGGAGGCCGCCATCGCGGCG
GTTTCCGTGGCCGACGTCGTTGCCGGCACCGGGGTTTTCGAGGCCAGCAA
CCCCAACCTTGGAAACAACTGGCTACGACTTCGACGTGTTCGTGGGTGGG
CACCTCACTCGCCTGGGTACAAAGGCGGACATACAGGTGAAGATAGACTT
CTACGCCGACGTTCTCGCGGGGGCGGAGGCCGCCATCGCGGCGGTTTCCG
TGGCCGACGTCGTTGCCGGCACCGGGGTTTTCGAGGCCAGCAACCCCAAC
CTTGGAAACAACTGGCTCCTTTTCAACGAGATTTTCGCGCGCCAGACGGA
CGTATGCGAGGCCTACGTGTTGGACTCGAGTTCTCGCGGGAGAGACTGGC
TCGCCGAATTGGGCGGGGTCGACATCACGCTCCGCTCTCAGGCTCCTTTT
CAACGAGATTTTCGCGCGCCAGACGGACGTATGCGAGGCCTACGTGTTGG
ACTCGAGTTCTCGCGGGAGAGACTGGCTCGCCGAATTGGGCGGGGTCGAC
ATCACGCTCCGCTCTCAG
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