mRNA_S-dermatodea_contig8787.16927.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8787.16927.1 vs. uniprot
Match: D7G565_ECTSI (Protein-ribulosamine 3-kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G565_ECTSI) HSP 1 Score: 477 bits (1227), Expect = 3.710e-160 Identity = 228/317 (71.92%), Postives = 257/317 (81.07%), Query Frame = 3
Query: 3 VKETTAGPGLHNRHFKYTATGGTFMAKVSK------------DGSMDNFVAERAGLEAILETGCLRAPRPLAHGTLPLGGSFLLMEHMPFIPFGQSIPEVLKHLAEGLAEMHLRDPPPDVTGFGFAGDNFLGMSPQDNAWKGDFATFMVENRLLPQFERAHDKFSTKYGTSNEDASAFRSMGADIFERARDVLGPVADAKPVLLHGDLWVGNCGGVPAEGRTREAAVFDPACWYGVHEFDLALATMFGGFGAPFYDTYHAIIPKAEGFDRRMRIYKLYHYLNHLNLHGAGFGHGGTVEDPRGYFERCVGLMKDIIAD 917
V+ETTAGPGLHNRHFKYTATGGTFMAK++K + S+DNF AE+ GLEAILETGCLRAP+PLA GTLPLGGSFLLMEHMPFIPFGQSIPEVL++LAEGLA MHL+DPPP GFGF GDNFLG + Q N W DF+ F VE RL PQF +A KF +GT NED F +G + A+ VL PVA++KP LLHGDLWVGNCGGVP EGR REAAVFDPA WYG+ EFDLALATMFGGFG PFY+TYHAIIPKA GF+RRMR+YKLYHYLNHLNLHGAGFGHGGTVEDP+GY+ER + LM++I+ D
Sbjct: 104 VQETTAGPGLHNRHFKYTATGGTFMAKIAKASRSSPPTNDWREASLDNFFAEQTGLEAILETGCLRAPKPLALGTLPLGGSFLLMEHMPFIPFGQSIPEVLRNLAEGLAAMHLQDPPPSCGGFGFVGDNFLGGTRQVNTWDSDFSNFFVERRLSPQFAQARTKFQDSWGTKNED---FERIGREAILTAKKVLEPVANSKPALLHGDLWVGNCGGVPGEGRLREAAVFDPAVWYGLPEFDLALATMFGGFGKPFYETYHAIIPKAPGFERRMRVYKLYHYLNHLNLHGAGFGHGGTVEDPKGYYERSLTLMQEIVQD 417
BLAST of mRNA_S-dermatodea_contig8787.16927.1 vs. uniprot
Match: A0A835YJQ4_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJQ4_9STRA) HSP 1 Score: 386 bits (991), Expect = 5.480e-125 Identity = 185/306 (60.46%), Postives = 225/306 (73.53%), Query Frame = 3
Query: 3 VKETTAGPGLHNRHFKYTATGGTFMAKVSKDGSMDNFVAERAGLEAILETGCLRAPRPLAHGTLPLGGSFLLMEHMPFIPFGQSIPEVLKHLAEGLAEMHLRDPPPDVTG-FGFAGDNFLGMSPQDNAWKGDFATFMVENRLLPQFERAHDKFSTKYGTSNEDASAFRSMGADIFERARDVLGPVADAKPVLLHGDLWVGNCGGV--PAEGRTREAAVFDPACWYGVHEFDLALATMFGGFGAPFYDTYHAIIPKAEGFDRRMRIYKLYHYLNHLNLHGAGFGHGGTVEDPRGYFERCVGLMKDII 911
VK+ + GPGLH RHFKY G F+ KVS+ S D+F AE A L+AI CLRAP PL+ G LPLGGS+LLME++P IPFGQSIP VL+ LAEGLA+MHL PPP ++G +GF+ D LG + QDNAW DFATF +E RL+PQ+ RA KFS YGTSN+++SA ++ +FE AR L PV + +P LLHGDLW+GNCG + +G TR VFDPACWYG HEFDLAL ++FGGF PF D YHA++PKA+GFD RMRIY+LYH LNHLNLHGAGF G+ E P GYFER V L+ DI+
Sbjct: 88 VKDVSPGPGLHTRHFKYDTADGPFLCKVSERSSDDHFKAEMASLQAIRSMNCLRAPEPLSCGALPLGGSYLLMEYLPCIPFGQSIPSVLQQLAEGLAQMHLT-PPPALSGLYGFSVDGLLGGANQDNAWDDDFATFFLEQRLIPQYHRAAAKFSANYGTSNQESSALMTLEEQVFEAARQALLPVKNVQPSLLHGDLWIGNCGAILGGTDGTTRVPVVFDPACWYGHHEFDLALGSLFGGFPPPFDDAYHALVPKADGFDERMRIYRLYHMLNHLNLHGAGFSSRGSTESPNGYFERAVKLVYDIV 392
BLAST of mRNA_S-dermatodea_contig8787.16927.1 vs. uniprot
Match: A0A0G4FFG3_VITBC (Protein-ribulosamine 3-kinase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FFG3_VITBC) HSP 1 Score: 294 bits (753), Expect = 2.660e-90 Identity = 148/306 (48.37%), Postives = 186/306 (60.78%), Query Frame = 3
Query: 3 VKETTAGPGLHNRHFKYTATGGTFMAKVSKDGSMDNFVAERAGLEAILETGCLRAPRPLAHGTLPLGGSFLLMEHMPFIPFGQSIPEVLKHLAEGLAEMHLRDPPPD--VTGFGFAGDNFLGMSPQDNAWKGDFATFMVENRLLPQFERAHDKFSTKYGTSNEDASAFRSMGADIFERARDVLGPVADAKPVLLHGDLWVGNCGGVPAEGRTREAAVFDPACWYGVHEFDLALATMFGGFGAPFYDTYHAIIPKAEGFDRRMRIYKLYHYLNHLNLHGAGFGHGGTVEDPRGYFERCVGLMKDIIA 914
VKE T GPGL NRHF YTATGGTF+ K ++ + NF E L A+ T LR P A G LPLGG+FLLMEH+ F+PFG SIP L L E LA++H+ D V +G+ NFLG + QDN W+ F F + NRLLP + A +F+ G +FERA +L V P LLHGDLW+GNCG R V+DPACW G EFDLA++T+FGGFG FY YH +P+ GF +R ++Y+LYH LNHLNL+G GFG GT DP+GY+ER LM++I+A
Sbjct: 46 VKEVTPGPGLFNRHFLYTATGGTFLCKQNERNTTANFRCEMESLNALRNTRTLRVPESFAVGHLPLGGAFLLMEHIQFVPFGASIPSTLAKLGEQLAQLHMMPCGNDRGVGKYGWTSHNFLGGTIQDNTWRTSFRDFCIMNRLLPLYNEASRRFACPAADDG-----IERFGPRLFERADAILSEVDQTTPSLLHGDLWLGNCGA----DSDRNPVVYDPACWSGAAEFDLAISTLFGGFGPAFYHAYHHHLPQQPGFHQRQQLYRLYHLLNHLNLYGKGFGSSGTARDPQGYYERAKQLMREIVA 342
BLAST of mRNA_S-dermatodea_contig8787.16927.1 vs. uniprot
Match: A0A7S2SUW6_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUW6_9STRA) HSP 1 Score: 226 bits (575), Expect = 4.580e-63 Identity = 134/324 (41.36%), Postives = 178/324 (54.94%), Query Frame = 3
Query: 3 VKETTAGPGLHNRHFKY-TATGGTFMAKVSKD-GSMDNFVAERAGLEAILETGCLRA-----PRPLAHGTLPLGGSFLLMEHMPFIPFGQSIPEVLKHLAEGLAEMHLRDPPPDVTG-------FGFAGDNFLGMSPQDNAWKGDFATFMVENRLLPQFERAHDKFSTKY---GTSNEDASAFR--SMGADIFERARDVLGPVADAK-PVLLHGDLWVGNCGGVPAEGR-TREAAVFDPACWYGVHEFDLALATMFGGFGAPFYDTYHAIIPKAEGFDRRMRIYKLYHYLNHLNLHGAGFGHGGTVEDPRGYFERCVGLMKDII 911
+ + T GPGL N H + T +G F+AKV+ + G++ N AER GLEA+ E L A P+PL+ G L G FL++EHM +PFG SIP V L GLA +H + +G+ DNFLG Q N W A F VE RL P + +FS GT + A+A S ++ ++A VL V D + P L+HGDLW GN G + R R + DPA W G EFDLAL++++G F F++ YHAI+PK GF R +Y+LYH LNHL LHG GFG+ G + PRGY E+ V M I+
Sbjct: 71 IADVTPGPGLRNTHLLHVTESGKRFLAKVNTEPGALANLEAERDGLEALSEAASLCASGLVVPKPLSVGCLSGDGGFLILEHMDLVPFGPSIPSVAGGLGRGLAMLHKASQDSGFSAAAPLGECYGYHMDNFLGGGDQGNGWSSSLADFFVERRLKPLLDATSHEFSRSAESNGTPLQGATAIDLDSYLDNVLQQAWKVLKKVEDREAPALMHGDLWAGNAGALRTAARGPRTPVLLDPAVWMGPPEFDLALSSLYGRFRDEFHEEYHAILPKTPGFQERQEVYRLYHILNHLRLHGPGFGYQG--DKPRGYLEQAVESMSRIL 392
BLAST of mRNA_S-dermatodea_contig8787.16927.1 vs. uniprot
Match: A0A1Y1ICK8_KLENI (Protein-ribulosamine 3-kinase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ICK8_KLENI) HSP 1 Score: 187 bits (474), Expect = 3.460e-49 Identity = 108/279 (38.71%), Postives = 148/279 (53.05%), Query Frame = 3
Query: 3 VKETTAGPGLHNRHFKYTATGGTFMAKVSKDGSMDNFVAERAGLEAILETGCLRAPRPLAHGTLPLGGSFLLMEHMPFIPFGQSIPEVLKHLAEGLAEMHLRDPPPDVTGFGFAGDNFLGMSPQDNAWKGDFATFMVENRLLPQFERAHDKFSTKYGTSNEDASAFRSMGADIFERARDVLGPVADAKPVLLHGDLWVGNCGGVPAEGRTREAAVFDPACWYGVHEFDLALATMFGGFGAPFYDTYHAIIPKAEGFDRRMRIYKLYHYLNHLNLHGAGF 839
++ ++ G G N +KY G F K ++ F AE AGLE + ET +R P+PL GTLP GGSF++ME FI FG + L L EMH GFGF DN +G + Q N W D+ F E+RL Q + A +++ + G + + ++LG V + PVLLHGDLW GN A + + DPAC+YG E + ++ GF + FY+ YH +IPK GF+RR+ IYKLYHYLNHLNL G+G+
Sbjct: 125 LRTSSVGGGCINVAYKYDTDAGPFFVKSNRSTGPAMFEAEAAGLEKMWETKTIRVPKPLKVGTLPGGGSFIIME---FIEFGSRSSQA--DLGRALGEMHKASTGQSPHGFGFFMDNTIGSTHQPNTWTSDWVDFFREHRLGFQLDLARRQYAE---------NTLYEKGQKLLAKLPELLGGV-EVAPVLLHGDLWSGNV----ASDKDGRPVILDPACYYGHSEAEFGMSWC-AGFNSSFYEAYHKVIPKQPGFERRVEIYKLYHYLNHLNLFGSGY 383
BLAST of mRNA_S-dermatodea_contig8787.16927.1 vs. uniprot
Match: A0A072TNA5_MEDTR (Protein-ribulosamine 3-kinase, chloroplastic n=4 Tax=IRL clade TaxID=2233839 RepID=A0A072TNA5_MEDTR) HSP 1 Score: 174 bits (440), Expect = 3.000e-45 Identity = 104/279 (37.28%), Postives = 147/279 (52.69%), Query Frame = 3
Query: 3 VKETTAGPGLHNRHFKYTATGGTFMAKVSKDGSMDNFVAERAGLEAILETGCLRAPRPLAHGTLPLGGSFLLMEHMPFIPFGQSIPEVLKHLAEGLAEMHLRDPPPDVTGFGFAGDNFLGMSPQDNAWKGDFATFMVENRLLPQFERAHDKFSTKYGTSNEDASAFRSMGADIFERARDVLGPVADAKPVLLHGDLWVGNCGGVPAEGRTREAAVFDPACWYGVHEFDLALATMFGGFGAPFYDTYHAIIPKAEGFDRRMRIYKLYHYLNHLNLHGAGF 839
K + G G N +Y G+F K ++ F AE GL A+ ETG +R P+P G+LP GGSF++ME FI FG S + + L LAEMH GFGF +N +G +PQ N W D+ F E+RL Q + A D++S + G + E + + V + +P LLHGDLW GN + + E + DPAC+YG +E + ++ GFG FY++Y +IPK GF++R +Y LYHYLNH NL G+G+
Sbjct: 46 TKISPVGGGCINFANRYDTDAGSFFVKTNRSIGPSMFEAEALGLGAMYETGTIRVPKPYKVGSLPSGGSFIIME---FIEFGGSRDQSV--LGRKLAEMHKSGK--SSKGFGFDVENTIGSTPQINTWSSDWIQFYGEHRLGYQLQLAFDQYSDR---------TILEKGQRLVENIKPLFDNV-EIEPCLLHGDLWSGNI----SSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYFEVIPKQPGFEKRRDLYLLYHYLNHYNLFGSGY 302
BLAST of mRNA_S-dermatodea_contig8787.16927.1 vs. uniprot
Match: A0A7S2ZNV6_9RHOD (Protein-ribulosamine 3-kinase n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZNV6_9RHOD) HSP 1 Score: 176 bits (445), Expect = 4.140e-45 Identity = 98/263 (37.26%), Postives = 146/263 (55.51%), Query Frame = 3
Query: 66 GTFMAKVSKDGSMDNFVAERAGLEAILETGCLRAPRPLAHGTLP-LG----GSFLLMEHMPFIPFGQSIPEVLKHLAEGLAEMHLRDPPPDVTG--FGFAGDNFLGMSPQDNAWKGDFATFMVENRLLPQFERAHDKFSTKYGTSNEDASAFRSMGADIFERARDVLGPVADAKPVLLHGDLWVGNCGGVPAEGRTRE-AAVFDPACWYGVHEFDLALATMFGGFGAPFYDTYHAIIPKAEGFDRRMRIYKLYHYLNHLNLHG 830
G + K+++ F++E GL I +T + P PL G+LP +G G+F+++E +P +PFG S PE + L LA MH+ ++ FGF +N+L ++P DN W D++ F+ L K + +++S ++ + +D V KP LLHGDLW+GN G T++ A V+DPAC++G E DLA+ +FGGF FY+ YH+ IPKAEGF+ R +IYK+YHYLN LNL G
Sbjct: 124 GNYFVKINRVEDASVFMSEAVGLTTIRKTETVYCPMPLHVGSLPKVGEFGPGAFMILEWLPLVPFGASRPEAQEDLGHALAMMHMSSAMDEIHEGKFGFVINNYLSLTPMDNRWTNDWSEFLARRMSLLLRSLFEPKVYARAPFKKDESSELINLTEKLIGSLKDRFADVP-VKPSLLHGDLWIGNA------GFTKDKAVVYDPACFFGHSEMDLAIMELFGGFTDKFYNAYHSRIPKAEGFEERSKIYKVYHYLNQLNLFG 379
BLAST of mRNA_S-dermatodea_contig8787.16927.1 vs. uniprot
Match: W7TUZ5_9STRA (Protein-ribulosamine 3-kinase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUZ5_9STRA) HSP 1 Score: 174 bits (442), Expect = 2.020e-44 Identity = 104/299 (34.78%), Postives = 156/299 (52.17%), Query Frame = 3
Query: 36 NRHFKYTATGGTFMAKVSKDGSMDNFVAERAGLEAILETGCLRAPRPLAHGTLP----LG-GSFLLMEHMPFIPFGQSIPEVLKHLAEGLAEMHLRDPPPDVTG--FGFAGDNFLGMSPQDNAWKGDFATFMVENRLLPQFERAHDKFSTKYGTSNEDASAFRSMGADIFERARDVLGPVADAKPVLLHGDLWVGNCGGVPAEGRTREAAVFDPACWYGVHEFDLALATMFGGFGAPFYDTYHAIIPKAEGFDRRMRIYKLYHYLNHLNLHGAGFGHGGTVEDPRGYFERCVGLMKDII 911
N FKYT G F K+++ F+ E GL A+ T L P+PL G LP +G G+F+++EH+ +PFG ++ + L E LA +HL + FGF+ NFL ++P +N W D+ +F+ RL Q + + NE R +G+ + +L V P L+HGDLW+GN G A +FDPAC++G HE +LA+ T+FGGF F++ YHA +PK +GF+ R ++Y+ Y+YLN LNL FG G CV L ++++
Sbjct: 143 NEVFKYTTDKGLFFIKLNRVEDPSVFLTEAVGLSALAATNTLPCPKPLHLGKLPKVGDVGPGAFMVLEHLKLLPFGIMRTDMQQRLGEQLAALHLDQTHAALHRGRFGFSVSNFLALTPLNNTWTDDWPSFLAR-RLESQVAALYQEKQYGRAALNETDMELRILGSRVIRAVPALLAGVK-VSPSLIHGDLWIGNAGATEAG-----PVIFDPACFFGHHEMELAMMTLFGGFRDEFWNAYHARLPKEKGFETRQKLYQFYYYLNQLNL----FGDAGVKRT-------CVRLAEELL 423
BLAST of mRNA_S-dermatodea_contig8787.16927.1 vs. uniprot
Match: A0A2P5EI47_TREOI (Protein-ribulosamine 3-kinase, chloroplastic n=2 Tax=Rosales TaxID=3744 RepID=A0A2P5EI47_TREOI) HSP 1 Score: 170 bits (431), Expect = 2.810e-44 Identity = 103/285 (36.14%), Postives = 148/285 (51.93%), Query Frame = 3
Query: 3 VKETTAGPGLHNRHFKYTATGGTFMAKVSKDGSMDNFVAERAGLEAILETGCLRAPRPLAHGTLPLGGSFLLMEHMPFIPFGQSIPEVLKHLAEGLAEMHLRDPPPDVTGFGFAGDNFLGMSPQDNAWKGDFATFMVENRLLPQFERAHDKFSTKYGTSNEDASAFRSMGADIFERARDV---LGPVAD---AKPVLLHGDLWVGNCGGVPAEGRTREAAVFDPACWYGVHEFDLALATMFGGFGAPFYDTYHAIIPKAEGFDRRMRIYKLYHYLNHLNLHGAGF 839
++ + G G NR +Y G+F K ++ F E GL A+ ET +R P+P G+LP GGS+++ME FI FG S + L LAEMH GFGF DN +G +PQ N W D+ F E+RL Q + A D++ + I+E+ + + +GP+ D +P LLHGDLW GN + + E + DPAC+YG +E + ++ GFG FYD Y ++PK GF++R +Y LYHYLNH NL G+G+
Sbjct: 20 IRISPVGGGCINRANRYDTDAGSFFVKTNRSIGPSMFEGEALGLNAMYETKSIRVPKPFKVGSLPTGGSYIIME---FIEFGASRGDQ-SVLGRKLAEMHKAGK--TEKGFGFDVDNTIGSTPQINTWSSDWIQFYGEHRLGFQLKLAQDQYGDR----------------TIYEKGQRLVKSMGPLFDDVVTEPCLLHGDLWSGNI----SADKNGEPIILDPACYYGHNEAEFGMSWC-AGFGGSFYDAYFKVMPKQPGFEKRTDLYLLYHYLNHYNLFGSGY 277
BLAST of mRNA_S-dermatodea_contig8787.16927.1 vs. uniprot
Match: D8SZT1_SELML (Protein-ribulosamine 3-kinase, chloroplastic n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SZT1_SELML) HSP 1 Score: 170 bits (431), Expect = 3.300e-44 Identity = 100/279 (35.84%), Postives = 144/279 (51.61%), Query Frame = 3
Query: 12 TTAGPGLHNRHFKYTATGGTFMAKVSKDGSMDNFVAERAGLEAILETGCLRAPRPLAHGTLPLGGSFLLMEHMPFIPFGQSIPEVLKHLAEGLAEMH---LRDPPPDVTGFGFAGDNFLGMSPQDNAWKGDFATFMVENRLLPQFERAHDKFSTKYGTSNEDASAFRSMGADIFERARDVLGPVADAKPVLLHGDLWVGNCGGVPAEGRTREAAVFDPACWYGVHEFDLALATMFGGFGAPFYDTYHAIIPKAEGFDRRMRIYKLYHYLNHLNLHGAGF 839
T G G N +Y G+F K ++ F AE AGL+A+ T +R P+PL G+LP GGSF++ME +I FG S + L L +MH + D GFGF DN +G +PQ N W D+ TF ++R+ Q E +S + G + E+ +L + D +P LLHGDLW GN A + + + DPAC+YG +E + ++ F + FYD Y +PK +GF+ R+ +YKLYHYLNH NL G+ +
Sbjct: 29 TPVGGGCINAANRYDTDAGSFFVKTNRGIDSSMFEAEAAGLDAMYRTNTVRVPKPLKAGSLPRGGSFIIME---YIEFGGSTLHGQRELGRMLGKMHKAGISD-----RGFGFEMDNTIGSTPQPNPWTPDWITFFRDHRIGHQLELLLTNYSDQQ---------IYEKGKKLLEKIPYLLRDLKDVQPCLLHGDLWSGNM----AYDKDGKPVILDPACYYGHNEAEFGMSWC-ASFNSSFYDAYFKEMPKQKGFEDRLHLYKLYHYLNHYNLFGSSY 285 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8787.16927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8787.16927.1 >prot_S-dermatodea_contig8787.16927.1 ID=prot_S-dermatodea_contig8787.16927.1|Name=mRNA_S-dermatodea_contig8787.16927.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=283bp MAKVSKDGSMDNFVAERAGLEAILETGCLRAPRPLAHGTLPLGGSFLLMEback to top mRNA from alignment at S-dermatodea_contig8787:2007..7446+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8787.16927.1 ID=mRNA_S-dermatodea_contig8787.16927.1|Name=mRNA_S-dermatodea_contig8787.16927.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5440bp|location=Sequence derived from alignment at S-dermatodea_contig8787:2007..7446+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8787:2007..7446+ >mRNA_S-dermatodea_contig8787.16927.1 ID=mRNA_S-dermatodea_contig8787.16927.1|Name=mRNA_S-dermatodea_contig8787.16927.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1698bp|location=Sequence derived from alignment at S-dermatodea_contig8787:2007..7446+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |