mRNA_S-dermatodea_contig8784.16926.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8784.16926.1
Unique NamemRNA_S-dermatodea_contig8784.16926.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig8784.16926.1 vs. uniprot
Match: D7FNX4_ECTSI (Putative anion:sodium symporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNX4_ECTSI)

HSP 1 Score: 417 bits (1072), Expect = 2.940e-143
Identity = 226/254 (88.98%), Postives = 239/254 (94.09%), Query Frame = 2 
Query:    2 GLSPPLLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAVSTIQVVLAPILVGMMTNKFFPKAVRAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGIGLQIPIVLLHLVGGLIGYALPKYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSYEARVPAAISVVWMAITGSMMAIIWRYIPVKAPKFDRTVKQRFEKINFLSIIKRKFIKGGDKT-KGA 760
            GLSP LLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIA ST+QVVLAPI+VGMMTNKFFP  V+AVLPVTPVVGVLSTCFLVASAVAQVAPTIISAG+ LQIPI+LLHL+GGLIGY LPK MGFSEVS+RTMAIETSMKSSAFGFLLAKLHFGS+EARVPAAISVVWMAITGSMMAIIWRYIPV+ PKFDR VK RFEKINFLS+++RKF K  + T KGA
Sbjct:  153 GLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIVVGMMTNKFFPSVVKAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLALQIPIILLHLLGGLIGYFLPKAMGFSEVSSRTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMMAIIWRYIPVETPKFDRGVKGRFEKINFLSVMRRKFGKDAEGTAKGA 406
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BLAST of mRNA_S-dermatodea_contig8784.16926.1 vs. uniprot
Match: A0A836CI93_9STRA (Putative anion:sodium symporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI93_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 1.860e-135
Identity = 207/242 (85.54%), Postives = 228/242 (94.21%), Query Frame = 2 
Query:    2 GLSPPLLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAVSTIQVVLAPILVGMMTNKFFPKAVRAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGIGLQIPIVLLHLVGGLIGYALPKYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSYEARVPAAISVVWMAITGSMMAIIWRYIPVKAPKFDRTVKQRFEKINFLSIIKRK 727
            GLSP LLAGLVLVGCINGGQASNLCT+IANGNVALSVMMTTITTLGAIVMTPLLCKLLLG VVPVDA+GIA ST++VVLAPI VGM TNK+FPK V+AVLP+TPVVGVLSTCFLVASAVAQVAPTIISAGI LQIPI+LLHLVGGL+GY +P+ +GFSEVS+RTMAIETSMKSSAFGFLLAKLHFGS+EARVPAA+SVVWMAITGS++AI+WRYIPVKAPKFDR VK RFEK+N L+  K+K
Sbjct:   94 GLSPALLAGLVLVGCINGGQASNLCTYIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGAVVPVDALGIARSTVEVVLAPIAVGMATNKYFPKLVKAVLPITPVVGVLSTCFLVASAVAQVAPTIISAGIALQIPIILLHLVGGLLGYLVPRKLGFSEVSSRTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAVSVVWMAITGSLLAIVWRYIPVKAPKFDRGVKARFEKVNLLNAFKKK 335
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BLAST of mRNA_S-dermatodea_contig8784.16926.1 vs. uniprot
Match: A0A7S1D1B0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1B0_CYCTE)

HSP 1 Score: 325 bits (834), Expect = 7.940e-109
Identity = 171/218 (78.44%), Postives = 195/218 (89.45%), Query Frame = 2 
Query:    2 GLSPPLLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAVSTIQVVLAPILVGMMTNKFFPKAVRAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGIGLQIPIVLLHLVGGLIGYALPKYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSYEARVPAAISVVWMAITGSMMAIIWRYIPVK 655
            GL+P LLAG+VLVG INGGQASNLCT+IA GNVALSV+MTT TT+GAI MTPLLCK LLGTVVPVDAVGIA+ST+QVVLAPI +GM TNKFFP  V+ VLP  PVVGV+STC LVASAVAQVA  I+ AG+ LQIP++LLHLVGGL+GY LP+  GF+EVS+RTMAIETSMKSSAFGFLLAKLHFG Y ARVP+A+SVVWMA+TGS++A+IWRYIPVK
Sbjct:   69 GLNPALLAGMVLVGSINGGQASNLCTYIAKGNVALSVLMTTATTIGAIFMTPLLCKALLGTVVPVDAVGIAMSTLQVVLAPIAIGMTTNKFFPGFVKTVLPFAPVVGVVSTCLLVASAVAQVAAPILDAGVSLQIPVLLLHLVGGLVGYFLPRLTGFNEVSSRTMAIETSMKSSAFGFLLAKLHFGEYAARVPSAVSVVWMALTGSILAVIWRYIPVK 286
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BLAST of mRNA_S-dermatodea_contig8784.16926.1 vs. uniprot
Match: A0A6U2HAE6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2HAE6_9STRA)

HSP 1 Score: 328 bits (841), Expect = 1.240e-108
Identity = 175/241 (72.61%), Postives = 203/241 (84.23%), Query Frame = 2 
Query:    5 LSPPLLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAVSTIQVVLAPILVGMMTNKFFPKAVRAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGIGLQIPIVLLHLVGGLIGYALPKYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSYEARVPAAISVVWMAITGSMMAIIWRYIPVKAP-KFDRTVKQRFEKINFLSIIKR 724
            L P LLAG+VLVG INGGQASNLCT+IA GNVALSV+MTT TTLGAI MTPLLCK LLG VVPVDA GIA+STIQVVLAPI +GM+TN +FP  V  +LP  PVVGV+STC LVASAVAQVA  I++AG+GLQIP++LLHLVGGLIGYALP+  GF E ++RTMAIETSMKSSAFGFLLAKLHFG Y ARVP+A+SVVWMA+TGS +A+IWRYIPVK   KFDR++ +++   N    IK+
Sbjct:  130 LDPALLAGMVLVGSINGGQASNLCTYIARGNVALSVLMTTATTLGAIFMTPLLCKGLLGAVVPVDARGIAISTIQVVLAPIAIGMLTNSYFPAFVEKILPFAPVVGVVSTCLLVASAVAQVAEPILAAGLGLQIPVLLLHLVGGLIGYALPRNTGFGETASRTMAIETSMKSSAFGFLLAKLHFGEYAARVPSAVSVVWMALTGSTLAVIWRYIPVKVSGKFDRSLVEKYPPFNLGRFIKK 370
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BLAST of mRNA_S-dermatodea_contig8784.16926.1 vs. uniprot
Match: A0A7S1FU32_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FU32_9STRA)

HSP 1 Score: 330 bits (845), Expect = 1.460e-108
Identity = 176/249 (70.68%), Postives = 207/249 (83.13%), Query Frame = 2 
Query:    2 GLSPPLLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAVSTIQVVLAPILVGMMTNKFFPKAVRAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGIGLQIPIVLLHLVGGLIGYALPKYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSYEARVPAAISVVWMAITGSMMAIIWRYIPVKAPK-FDRTVKQRFEKINFLSIIKRKFIKGGD 745
            GL   LLAG+VLVG INGGQASNLCT+IA GNVALSV+MTT TTLGAI MTPLLCK LLG +VPVDAVGIA+STIQVVLAPI VGM  NK FPK V+A+LP  PVVGV+STC LVASAVAQVA  I +AG+ LQIP++LLHL+GGL+G+ LPK +GF EV+ RTMAIETSMKSSAFGFLLAKLHFG Y ARVP+A+SVVWMA+TGSM+A+IWRYIPV  PK FDR++ +++       ++K  F++  D
Sbjct:  178 GLDSALLAGVVLVGSINGGQASNLCTYIAKGNVALSVLMTTATTLGAIFMTPLLCKTLLGAIVPVDAVGIAMSTIQVVLAPIAVGMFLNKNFPKVVKAILPFAPVVGVVSTCLLVASAVAQVAEPIRNAGMSLQIPVLLLHLLGGLVGFILPKLLGFGEVACRTMAIETSMKSSAFGFLLAKLHFGQYAARVPSAVSVVWMALTGSMLAVIWRYIPVPQPKVFDRSLLEKYPPFQPKKMLKNMFVEKED 426
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BLAST of mRNA_S-dermatodea_contig8784.16926.1 vs. uniprot
Match: A0A8J2WYC5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYC5_9STRA)

HSP 1 Score: 327 bits (838), Expect = 1.180e-107
Identity = 170/244 (69.67%), Postives = 205/244 (84.02%), Query Frame = 2 
Query:    5 LSPPLLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAVSTIQVVLAPILVGMMTNKFFPKAVRAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGIGLQIPIVLLHLVGGLIGYALPKYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSYEARVPAAISVVWMAITGSMMAIIWRYIPVKAPKFDRTVKQRFEKINFLSIIKRKFIK 736
            L P L+AG+VLVG INGGQASNLCTFIANGNVALSV+MTT TT+GAI MTPLLCK  LGTVVPVDA GI VST+QVVLAPILVGM  N  FPK V+ + PVTPV+G++STC LVA+AV QVA  I++AG+ LQ+P++LLHLVGG++GY   + +GF E S+RTMAIETSMKSSAFGFLLAKLHFG++ ARVP+A+SVVWMA+TGS MA+ WR++PVK  KFDR VK+RFE ++ L+  K+ F K
Sbjct:  170 LDPALVAGMVLVGSINGGQASNLCTFIANGNVALSVLMTTATTIGAIFMTPLLCKTFLGTVVPVDAAGIVVSTLQVVLAPILVGMTMNAKFPKVVKKITPVTPVIGMVSTCLLVAAAVGQVAEPILAAGLNLQLPVMLLHLVGGIVGYWGARALGFGETSSRTMAIETSMKSSAFGFLLAKLHFGAFAARVPSAVSVVWMALTGSSMAVAWRFMPVKPVKFDRKVKERFESVDLLTRAKKLFGK 413
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BLAST of mRNA_S-dermatodea_contig8784.16926.1 vs. uniprot
Match: A0A7S1E294_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E294_9STRA)

HSP 1 Score: 322 bits (826), Expect = 1.950e-107
Identity = 168/221 (76.02%), Postives = 197/221 (89.14%), Query Frame = 2 
Query:    2 GLSPPLLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAVSTIQVVLAPILVGMMTNKFFPKAVRAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGIGLQIPIVLLHLVGGLIGYALPKYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSYEARVPAAISVVWMAITGSMMAIIWRYIPVKAPK 664
            GLSP LLAG+VLVG INGGQASNLCT+IA GNVALSV+MTT TT+GAI MTPLLCK +LGTVVPVDAVGIA ST+QVVLAPI +GM  N+FFPK V+A+LP+TPVVGVLSTC LVASAVAQV+  I++AG+ LQ+P++LLH+VGGL+GY LPK  GF EV++RTMAIETSMKSSAFGFLLAKLHFG Y ARVP+A+SVVWMA+TGSM+A++WRYIP+   K
Sbjct:   81 GLSPALLAGMVLVGSINGGQASNLCTYIARGNVALSVLMTTATTVGAIFMTPLLCKAVLGTVVPVDAVGIAKSTLQVVLAPIALGMTANQFFPKFVKAILPITPVVGVLSTCMLVASAVAQVSEPIMNAGLTLQLPLLLLHVVGGLVGYFLPKATGFDEVTSRTMAIETSMKSSAFGFLLAKLHFGEYAARVPSAVSVVWMALTGSMLAVVWRYIPIDEKK 301
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BLAST of mRNA_S-dermatodea_contig8784.16926.1 vs. uniprot
Match: A0A1E7FNI1_9STRA (BASS family transporter: sodium ion/bile acid n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNI1_9STRA)

HSP 1 Score: 320 bits (820), Expect = 4.850e-107
Identity = 168/218 (77.06%), Postives = 189/218 (86.70%), Query Frame = 2 
Query:    2 GLSPPLLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAVSTIQVVLAPILVGMMTNKFFPKAVRAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGIGLQIPIVLLHLVGGLIGYALPKYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSYEARVPAAISVVWMAITGSMMAIIWRYIPVK 655
            GL P +LAG+VLVG INGGQASNLCT+IA GNVALSV+MTT TT+GAI MTPL+CK LLGTVVPVDA GIA STIQVVL PI VGM TNKFFP  V+ +LP+TPV+GVLSTC LVASAVAQV   I++AG+ LQ PI LLHL+GGL+GY LPK  GF EV +RTMAIETSMKSSAFGFLLAKLHFG Y ARVP+A+SVVWMA+TGSM+A+IWRYIPVK
Sbjct:   46 GLDPAMLAGMVLVGSINGGQASNLCTYIARGNVALSVLMTTATTVGAIFMTPLICKGLLGTVVPVDAAGIAFSTIQVVLGPIAVGMATNKFFPNFVKKILPITPVIGVLSTCMLVASAVAQVTEPILNAGLQLQAPIFLLHLIGGLVGYGLPKLTGFGEVKSRTMAIETSMKSSAFGFLLAKLHFGQYAARVPSAVSVVWMALTGSMLAVIWRYIPVK 263
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BLAST of mRNA_S-dermatodea_contig8784.16926.1 vs. uniprot
Match: A0A7S1XKP9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKP9_9STRA)

HSP 1 Score: 323 bits (829), Expect = 2.720e-106
Identity = 167/234 (71.37%), Postives = 201/234 (85.90%), Query Frame = 2 
Query:    5 LSPPLLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAVSTIQVVLAPILVGMMTNKFFPKAVRAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGIGLQIPIVLLHLVGGLIGYALPKYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSYEARVPAAISVVWMAITGSMMAIIWRYIPVKAPKFDRTVKQRFEKINF 706
            LSP L+AG+VLVG INGGQASNLCT+IANGNVALSV+MTT+TT GAIV TPLLCK+LLG VVPV+AVGIAVSTIQVVLAPI +GM  NKFFPKAV++VLP+TPV+G  STC LVA++VAQ AP I++AG+ LQ P++LLHLVGGLIGY+LP+ +GFSE S+RTMAIET+MKSSAFGFLLAKLHF  +  RVP+A+SVVWMAITGS +A+ WRY+PV    FDR + +++    F
Sbjct:  177 LSPELVAGMVLVGSINGGQASNLCTYIANGNVALSVLMTTVTTFGAIVFTPLLCKVLLGAVVPVNAVGIAVSTIQVVLAPIFLGMTLNKFFPKAVKSVLPLTPVIGTFSTCLLVAASVAQCAPDIMNAGLKLQFPVLLLHLVGGLIGYSLPRKLGFSETSSRTMAIETAMKSSAFGFLLAKLHFVDFAVRVPSAVSVVWMAITGSALAVFWRYMPVPRATFDRKLPEKYPSFKF 410
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BLAST of mRNA_S-dermatodea_contig8784.16926.1 vs. uniprot
Match: F0Y5R8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5R8_AURAN)

HSP 1 Score: 320 bits (820), Expect = 1.450e-105
Identity = 165/245 (67.35%), Postives = 201/245 (82.04%), Query Frame = 2 
Query:    2 GLSPPLLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAVSTIQVVLAPILVGMMTNKFFPKAVRAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGIGLQIPIVLLHLVGGLIGYALPKYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSYEARVPAAISVVWMAITGSMMAIIWRYIPVKAPKFDRTVKQRFEKINFLSIIKRKFIK 736
            GL P ++AG+VLVG INGGQASNLCTFIA GNVALSV+MTT TT+GAI MTP LCK  LGTVVPVDA GI VST+QVVLAPI++GM  N   PK V A+ P TPVVGV+STC LVA+AV QVA  I+ AG+ LQ+P++L+HLVGG++GY L + +GF E ++RTMAIETSMKSSAFGFLLAKLHFG +  RVP+A+SVVWMA+TGS MA+ WR++ V  PKFDR V++RFEK++ +SI+KR   K
Sbjct:  124 GLDPAMVAGMVLVGSINGGQASNLCTFIAKGNVALSVLMTTATTIGAIFMTPFLCKAFLGTVVPVDARGIVVSTLQVVLAPIVLGMTLNAKAPKLVSAIKPATPVVGVVSTCLLVAAAVGQVAEPILDAGLSLQVPVMLIHLVGGVVGYWLSRLLGFGETTSRTMAIETSMKSSAFGFLLAKLHFGDFACRVPSAVSVVWMALTGSSMAVAWRFMKVNPPKFDRNVRERFEKVDVISIVKRTLGK 368
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8784.16926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNX4_ECTSI2.940e-14388.98Putative anion:sodium symporter n=2 Tax=Ectocarpus... [more]
A0A836CI93_9STRA1.860e-13585.54Putative anion:sodium symporter n=1 Tax=Tribonema ... [more]
A0A7S1D1B0_CYCTE7.940e-10978.44Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A6U2HAE6_9STRA1.240e-10872.61Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1FU32_9STRA1.460e-10870.68Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A8J2WYC5_9STRA1.180e-10769.67Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S1E294_9STRA1.950e-10776.02Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A1E7FNI1_9STRA4.850e-10777.06BASS family transporter: sodium ion/bile acid n=1 ... [more]
A0A7S1XKP9_9STRA2.720e-10671.37Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0Y5R8_AURAN1.450e-10567.35Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8784contigS-dermatodea_contig8784:3385..8000 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size844
Cds size843
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8784.16926.1prot_S-dermatodea_contig8784.16926.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8784 3385..8000 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925366.5807543-CDS-S-dermatodea_contig8784:3384..35301622925366.5807543-CDS-S-dermatodea_contig8784:3384..3530Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 3385..3530 -
1694079884.8566904-CDS-S-dermatodea_contig8784:3384..35301694079884.8566904-CDS-S-dermatodea_contig8784:3384..3530Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 3385..3530 -
1622925366.5926945-CDS-S-dermatodea_contig8784:4582..48281622925366.5926945-CDS-S-dermatodea_contig8784:4582..4828Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 4583..4828 -
1694079884.8668506-CDS-S-dermatodea_contig8784:4582..48281694079884.8668506-CDS-S-dermatodea_contig8784:4582..4828Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 4583..4828 -
1622925366.60412-CDS-S-dermatodea_contig8784:5586..56731622925366.60412-CDS-S-dermatodea_contig8784:5586..5673Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 5587..5673 -
1694079884.8768718-CDS-S-dermatodea_contig8784:5586..56731694079884.8768718-CDS-S-dermatodea_contig8784:5586..5673Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 5587..5673 -
1622925366.616412-CDS-S-dermatodea_contig8784:6408..65431622925366.616412-CDS-S-dermatodea_contig8784:6408..6543Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 6409..6543 -
1694079884.8882468-CDS-S-dermatodea_contig8784:6408..65431694079884.8882468-CDS-S-dermatodea_contig8784:6408..6543Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 6409..6543 -
1622925366.6266046-CDS-S-dermatodea_contig8784:6951..70831622925366.6266046-CDS-S-dermatodea_contig8784:6951..7083Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 6952..7083 -
1694079884.898579-CDS-S-dermatodea_contig8784:6951..70831694079884.898579-CDS-S-dermatodea_contig8784:6951..7083Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 6952..7083 -
1622925366.6362002-CDS-S-dermatodea_contig8784:7903..80001622925366.6362002-CDS-S-dermatodea_contig8784:7903..8000Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 7904..8000 -
1694079884.9080474-CDS-S-dermatodea_contig8784:7903..80001694079884.9080474-CDS-S-dermatodea_contig8784:7903..8000Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8784 7904..8000 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8784.16926.1

>prot_S-dermatodea_contig8784.16926.1 ID=prot_S-dermatodea_contig8784.16926.1|Name=mRNA_S-dermatodea_contig8784.16926.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=281bp
RSQPPAAGGPRARGLHQRGAGIQPVHLHRQRERGPVGDDDHHHHARSYRD
DPAALQAAAGNRRAGGRRGYRGLDDPGCARPDLGGHDDEQVLPEGGAGRA
PRHPGGGRALDVLPRGVRCRAGGADDHLGRDRAANSYRAAPPRRRADWIR
VAEVHGLLGGVRPHDGHRDVHEVLRVRFPVGKAPLRVLRGEGTCGDLGGV
DGDHGVDDGDHLEVHSGQGSQVRPDREAALREDQLLEHHQEEVHQGGRQD
QGRVRMAALCARLGRSGHGAGGVGVGICRV*
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mRNA from alignment at S-dermatodea_contig8784:3385..8000-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8784.16926.1 ID=mRNA_S-dermatodea_contig8784.16926.1|Name=mRNA_S-dermatodea_contig8784.16926.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4616bp|location=Sequence derived from alignment at S-dermatodea_contig8784:3385..8000- (Saccorhiza dermatodea SderLu1190fm monoicous)
CGGTCTCAGCCCCCCGCTGCTGGCGGGCCTCGTGCTCGTGGGCTGCATCA
ACGGGGGGCAGGCATCCAACCTGTGCACCTTCATCGCCAACGGGAACGTG
CGTATCATATCGAGCGCTTCCTCAAATCCTAGGCGGGCCTCGAATCCTAG
GCGGGTGTAGATTCAACCGGTTCTTGTCGGAGCGTGATGTTTGTCGTAGC
GGCGGGTGCTCTCAGGATGTGCGCTTCTTTGTCAGCATTTTTTTTCTTCT
TCTTTTTTCTCTTGTTGGAAACCCGACCCCCGGCTTTTGTACAGAAGTAC
AGCAGTAGGTAGAACTACCGATTATTATTTTTTTCTAAAAGAGAAAAGTG
CTGATCGTGGTTTCAATTTCAAGGGGTCGGGCGTGCGGCGAAGGAGAGAG
CTGGGTGGTGTGTGTGCTATCGTGTGCCTGGGTATGCTTGCTCGATGGAC
GCCTTTCGCGGGTTTTTATCTTATCGCCCTCCTCTGTGTGCTTTGTCGCA
GCCTTGGGGCTTTGCCCGTCCTTGCTCTGCTGCTCAGCCGTTCGGCATTG
GCGGTGTTCCTTCGTTCGCTCTTCAACAGCTGGCTCTTGACGGTGTCGAC
TTTTTTCTAGGATTTACGGTAGCGCTGTCACGACACCAAAACCCCACAAT
GGTGCAGTAATTGTTGTGGCCCGTGTGTGAGAGGGGAATGCCACTGGTGT
AGCATGCAATGCACAGGGACACCACAGCACCAAGTGTTTTCAGTTTCGGT
GGAATTTGTGCTGCCGCTGCTGCAACTGTTGCCACAACAGCGCGACACTC
TCATGCGTTGCTGCTTTTCAATCTCGTGGCAAACGCTATGTACGCTTGCG
CTAAGAAAACTGTGATCCCTTCGTTTTGCTGCGTCTGTTACTTGTTGCCT
CCCGTGATCACGCACAGGTGGCCCTGTCGGTGATGATGACCACCATCACC
ACGCTAGGAGCTATCGTGATGACCCCGCTGCTCTGCAAGCTGCTGCTGGG
AACCGTCGTGCCGGTGGACGCCGTGGGTATCGCGGTCTCGACGATCCAGG
TCAGGGGGTATACTTCTTTTGCGTTGCATTAGCAGTATCAGGTCCCTAAC
CGCCCCCTCCCCCCACCTATAACCGCCAGGATGCAACCTATCGTGCTTTG
TATGTGGTTGGCAAGCCGGTGAACGCTACGCCACGTCTCCCAGGGGTCGT
GGACGGGGGGAGTCCGGTGTGGCCTTACGCCTTAAGTCAAGACGGGGATA
TCCGAAGATGCTCCCGTATCTCCGAAGATCATATCGGCGAGAAGCCCTCA
ATGCATGACGCTTTCTTTCACGGTCTGTCGGTGGTTGGTGAAGCCCGCCA
CTTTGCGTTGGCGGGGGATTAATTCGATTTGAGCCAACCAGGGTATCGAA
AAACCAGTGCTGCCCTTTGTTCGGTCGGATACTACCCGCGTTTGTTGCCT
GTGGCAGGTTGTGCTCGCCCCGATCTTGGTGGGCATGATGACGAACAAGT
TCTTCCCGAAGGCGGTGCGGGCCGTGCTCCCCGTCACCCCGGTGGTGGGC
GTGCTCTCGACGTGCTTCCTCGTGGCGTCCGCTGTCGCGCAGGCGAGGAG
GAGTTCCCACATACCGACTGGCGTTTTTCAGTGCCGTTTTCCGTTGCGTT
TTCGGTTGCGTTTTGCTGTTGTTCGTAGGAACTTTCAGGGAATGTCGCGC
TTTGTTGTATGTACTGTTTTTTACCTTGACTTCCGACGGGCGGTGATGGC
TGCGCGGGAACTTTTTCCGATGCGCTTGTTTTTCACTGCATCCCTCGTGA
GAATCCAGGCGTATTATGCGTAGAACCGTATCATTATACTGTATTAGGAT
CATACTTAGCATATTGTCAATAATAATAATATTAGGACCACCACGAGCAC
GCCCAGGCAGCAGCTCTGCTGTGGCGTACGAAGGACGAGAGCGCTCTTTC
ACTTCCTGCACCCCTGTTTCTTGCTACGGCGGGGGGGGCGATGCTGCTGA
GAGGTGTTGAAGGCAACGTGAAGCTCGCGCCGCCTTAACCCTTTTGGGAC
TAAAGCTGTTTTCGGGTAACTGTTTGCTATTACTACATTTCCTTCTGTTT
TGGGACTAAGGCTGTTTTCGGGTAACTGTTTGTCAAAATGGTAGCGAACA
GTTACCCGAAAACATGCTTAGTCCCCAGGCTTAGTCCCAAAAGGGTAAAT
AATAAATAGCAGACAGTTACCCGAAAACAGCTTTAGTCCCAAAAGGGTTA
AGCCATCTGCTACGGTACGGTATTATATGTATCACTTAACCTGTGGGTTC
GTGTGTGTTCTTCGTGTGTGTGTTCAGGTGGCGCCGACGATCATCTCGGC
AGGGATCGGGCTGCAAATTCCTATCGTGCTGCTCCACCTCGTCGGCGGGC
TGATTGGATACGCGGTGAGAATCCTACCGGGGCGCCAAATCGTGGTGTAG
CGGCGTGTAGCGTGCGAGCACTTTATTAGTAGATGGTTGATTTGCTTTGC
TGAGTGTTCGCCCGTGAAGCGATGCATATTTTGCGTGAATCCCCCCCCCC
CCTCTTGCATGATCCCACCCCAAATCAAGTCACAGCACGTTTTAATGACC
TGAGGGCGTTTTTTGTTTGCTATTTGCCAGCACCTATATTTCACATGGAA
CAGTGACTTAAGCCCGAGCATAGGCTACAAAATCCTCGCCGAAGCGGTGG
TGGAAAAGGAATGTGATGTGTGTATCTCTACCCTCCCACGCTTAGCTTGC
GTGCACGGCGAAGTTGTGCGTGCTCACCCGCACCCCGTCACTTGCCACGT
CCCCGTAAATATTGTGGTGATATTGGAGGCAAGACGGACTCAATTCATTC
CCCAAAGGGTTAACGTGGCTCATTTCACCTTCTGAGTGGTTTCGCCTTCG
TAAGGAGAGCCTGAAATCGCCCAGATTTTGATGTTTTGCGTTGGCGGAGA
ATCGTGATCAATCAAACACCCACTTAACACGAAAACGCACTATTTTATTA
TTTGTGTCTTACATTTTCTGCTGCTCTGAATAGAAGCCTTGACGCCGGGC
ACCAAGGCGTGCAGCCGGGACAAAAGTAGTGTCGATCCATCGCATAATGG
CGGCGTGCTTACAGCCGTCTCTCCACCCTCGCCCCGACGTTTCCCCGGCT
GGCTGCCGGTCCCTCGCTTCAGTTGCCGAAGTACATGGGCTTCTCGGAGG
TGTCCGCCCGCACGATGGCCATCGAGACGTCCATGAAGTCCTCCGCGTTC
GGTTTCCTGTTGGCAAAGCTCCACTTCGGGTCTTACGAGGCGAGGGTACC
TGCGGCGATCTCGGTGGTGTGGATGGCGATCACGGGGTCGATGATGGCGA
TCATCTGGAGGTACATTCCGGTCAAGGCTCCCAAGTTCGACCGGACCGTG
AAGCAGCGCTTCGAGAAGGTGATCGTTTTACACAAAGTAGCATCGTCATT
TTTTGTACATTTTTTTGTGCTGCGGTTTTTTTTCTTCTTCCTCTGTTTCC
TCTTTTTCCTCTTTTTTTTTTGCTTTTGTGTGGAGTTGTGTGTGTTTTTT
TAGTGATTGCGTTCCGACTTCGTTTTTTTACGTGCGATCTCGAACAGGGT
TGTTTGGTGCAACTAATCCGATCTATCAATGTAAAAGCGAACCGTTGTGG
CGGCGGAATAGGGTCCAATGTATGGAAACGTGGAAACACGTTGTAGAATG
CTGCCAGGGTGATGTCCAACTCCCTTGTTGGTCCTCCCGTGGATCAGGCA
TCCTGCCCCTGTATGTTTAGTTCAAAACCAAACCCAAAGTGACAAAGGAA
ACCGTGGATACCATGAGGGAAAATAAACTGAGACTTGGAATGGAGTGGCC
TTGAGTGGAACTGAAGCCTTCCGTGACAGCGTGCGTTGCCGTTGGAGACT
GGACCTGGATTCGCTAGCATAGCTGTTGTAGCGCCCGAGCTTTTAGACAT
ATACAAGTGCTGTGCTAGGAGAAGGAGACTGGATGCATGGGGACGACTTG
CGACTGAGCCTGCATGAGACTAGACACGAGTGGGAATGAACTTGACGAGA
CGGAAAGCGTAAATTGGGCTATATCCTCCGTTACACCGCCTCTCATCTGT
TAACATTCAAATCTCACTCGATCAAACGCTTGGAAAAGCGGGGAAACAGT
ATTTGCTAATGTGGTCGCTTGGATTGAGATGTTTTTTGTCCCATGCGCTT
GACCAGCGGGGACGGGAGTTGCGCCGAGCAGTACGGGACCCACGCTACCG
GCATGAAATATCATCCAACCTCGCTTTCCAAAGCCAAGTCTTCTGTCCCG
CACGCCTCCACCTCGTGCATGCGGCGCCCCGTCGTTTTCTCTTTCCACCG
ACAATCTTGAAGCAATTCGCGACAGACACCCTTCTCCCTTTCCCTCTCCC
CGGCACTATTTAACAACACGTGTTGCCTTTCGACCGTTTCGACTTGACCC
CCCCCATTCCCCTCGTGTAGATCAACTTCTTGAGCATCATCAAGAGGAAG
TTCATCAAGGGGGGCGACAAGACCAAGGGCGCGTGAGAATGGCCGCACTT
TGTGCACGCTTGGGAAGGAGCGGGCACGGCGCGGGAGGGGTGGGGGTGGG
CATTTGCCGTGTGTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig8784:3385..8000-

>mRNA_S-dermatodea_contig8784.16926.1 ID=mRNA_S-dermatodea_contig8784.16926.1|Name=mRNA_S-dermatodea_contig8784.16926.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1686bp|location=Sequence derived from alignment at S-dermatodea_contig8784:3385..8000- (Saccorhiza dermatodea SderLu1190fm monoicous)
CGGTCTCAGCCCCCCGCTGCTGGCGGGCCTCGTGCTCGTGGGCTGCATCA
ACGGGGGGCAGGCATCCAACCTGTGCACCTTCATCGCCAACGGGAACCGG
TCTCAGCCCCCCGCTGCTGGCGGGCCTCGTGCTCGTGGGCTGCATCAACG
GGGGGCAGGCATCCAACCTGTGCACCTTCATCGCCAACGGGAACGTGGCC
CTGTCGGTGATGATGACCACCATCACCACGCTAGGAGCTATCGTGATGAC
CCCGCTGCTCTGCAAGCTGCTGCTGGGAACCGTCGTGCCGGTGGACGCCG
TGGGTATCGCGGTCTCGACGATCCAGGTGGCCCTGTCGGTGATGATGACC
ACCATCACCACGCTAGGAGCTATCGTGATGACCCCGCTGCTCTGCAAGCT
GCTGCTGGGAACCGTCGTGCCGGTGGACGCCGTGGGTATCGCGGTCTCGA
CGATCCAGGTTGTGCTCGCCCCGATCTTGGTGGGCATGATGACGAACAAG
TTCTTCCCGAAGGCGGTGCGGGCCGTGCTCCCCGTCACCCCGGTGGTGGG
CGTGCTCTCGACGTGCTTCCTCGTGGCGTCCGCTGTCGCGCAGGTTGTGC
TCGCCCCGATCTTGGTGGGCATGATGACGAACAAGTTCTTCCCGAAGGCG
GTGCGGGCCGTGCTCCCCGTCACCCCGGTGGTGGGCGTGCTCTCGACGTG
CTTCCTCGTGGCGTCCGCTGTCGCGCAGGTGGCGCCGACGATCATCTCGG
CAGGGATCGGGCTGCAAATTCCTATCGTGCTGCTCCACCTCGTCGGCGGG
CTGATTGGATACGCGGTGGCGCCGACGATCATCTCGGCAGGGATCGGGCT
GCAAATTCCTATCGTGCTGCTCCACCTCGTCGGCGGGCTGATTGGATACG
CGTTGCCGAAGTACATGGGCTTCTCGGAGGTGTCCGCCCGCACGATGGCC
ATCGAGACGTCCATGAAGTCCTCCGCGTTCGGTTTCCTGTTGGCAAAGCT
CCACTTCGGGTCTTACGAGGCGAGGGTACCTGCGGCGATCTCGGTGGTGT
GGATGGCGATCACGGGGTCGATGATGGCGATCATCTGGAGGTACATTCCG
GTCAAGGCTCCCAAGTTCGACCGGACCGTGAAGCAGCGCTTCGAGAAGTT
GCCGAAGTACATGGGCTTCTCGGAGGTGTCCGCCCGCACGATGGCCATCG
AGACGTCCATGAAGTCCTCCGCGTTCGGTTTCCTGTTGGCAAAGCTCCAC
TTCGGGTCTTACGAGGCGAGGGTACCTGCGGCGATCTCGGTGGTGTGGAT
GGCGATCACGGGGTCGATGATGGCGATCATCTGGAGGTACATTCCGGTCA
AGGCTCCCAAGTTCGACCGGACCGTGAAGCAGCGCTTCGAGAAGATCAAC
TTCTTGAGCATCATCAAGAGGAAGTTCATCAAGGGGGGCGACAAGACCAA
GGGCGCGTGAGAATGGCCGCACTTTGTGCACGCTTGGGAAGGAGCGGGCA
CGGCGCGGGAGGGGTGGGGGTGGGCATTTGCCGTGTGTGAATCAACTTCT
TGAGCATCATCAAGAGGAAGTTCATCAAGGGGGGCGACAAGACCAAGGGC
GCGTGAGAATGGCCGCACTTTGTGCACGCTTGGGAAGGAGCGGGCACGGC
GCGGGAGGGGTGGGGGTGGGCATTTGCCGTGTGTGA
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