prot_S-dermatodea_contig1277.1691.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1277.1691.1
Unique Nameprot_S-dermatodea_contig1277.1691.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length412
Homology
BLAST of mRNA_S-dermatodea_contig1277.1691.1 vs. uniprot
Match: D7FP33_ECTSI (E3 ubiquitin-protein ligase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP33_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 2.060e-57
Identity = 136/398 (34.17%), Postives = 199/398 (50.00%), Query Frame = 0
Query:    4 DESLAFEEAFPRCKVLRSSMLTVNQTGVDNGDVQALSATFLATWLDNPEGEANEDDTF------LFTQFVEAYFIDVERGPNALDGKPIDAFLPYERLTPVGNTTNPTLLNHMVLTFTEFTRLTKSGTKRETDKIYTQRTTSGRAHLYLEDDFPSTDEVAFLLFQMVINKFEFSSVDEVDPLNPWATIGAIGGAWQYVVLAFGLFCVFSEKQLPEFKMRDFKQMTWKPANPFARAASTTSNAPT--------------------------------------KPTIGPRAAESQGSASTATWGMSNR-----------------GDVGGDILPPGWVMRSDGEGRTYYKNTLLKTTQWEPPYQ--RDQSCRGGTVQMVDAPMLQMRQRFN--SGDRTR 336
            D + A EE FP C+V+  S LT+++ G+++GDV +  A+F   W ++        DTF      +  QF+ AY IDVE G   L+GK +D  LPY R+ P   T   T +NHMV+  TEF  +  +G + E  + Y+Q TT+G  + Y  ++     E A ++  + I KFE++S+ EVDP++ W+ IGAIGG WQ+VV  FGLF V+S KQ P+ KMR+F++   KPA+   +  ST  +  +                                      K +  P A  S      A+    NR                 G + GD LPPGW+ R+D  G+TY+++T+ KTTQWE P Q  R  S   G  +++D PM   R+  N  S D +R
Sbjct:  143 DATSAIEEEFPHCRVIPLSRLTMDEDGINSGDVDSFDASFYFLWYESA-------DTFDPEIYPINAQFLSAYLIDVEAGVEPLEGKSVDVKLPYARIEPTTATELTTTVNHMVMGLTEFAGIDDNGNREERQRTYSQSTTTGTQNWYWTEETIEL-EFALIMVDVSIPKFEYTSIVEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVYSVKQSPDRKMRNFRKSVTKPASIVNKRLSTLGSRSSISNQDIELDASEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSARGGPQASGTALNRIFRPAHASSGAGVSREHGQLSGDPLPPGWISRTDDSGKTYFQDTVSKTTQWERPTQHPRSSSVSSGRPEVIDMPMAHTRRGSNASSADNSR 532          
BLAST of mRNA_S-dermatodea_contig1277.1691.1 vs. uniprot
Match: A0A6H5JSI3_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI3_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 4.940e-57
Identity = 128/313 (40.89%), Postives = 176/313 (56.23%), Query Frame = 0
Query:    2 ADDESLAFEEAFPRCKVLRSSMLTVNQTGVDNGDVQALSATF------------LATWLDNPEG------EANEDDTFLFTQFVEAYFIDVERGPNALDGKPIDAFLPYERLTPVGNTTNPTLLNHMVLTFTEFTRL-TKSGTKRETDKIYTQRTTSGRAHLYLEDDFPSTDEVAFLLFQMVINKFEFSSVDEVDPLNPWATIGAIGGAWQYVVLAFGLFCVFSEKQLPEFKMRDFKQMTWKPANPFAR-AASTTSNAPTKPTIGPRAAESQGSASTATWGMSNRGDVGGDILPPGWVMRSDGEGRTYYKNTL 294
            AD+ SLA +EA+P C+VL +S LTVNQTG+DNGD+    ATF               W ++P        E       + TQFV  +F+DV+ G  A+  +  DA LPY RL+P  N +    ++HMV+  T+F  + T SG K++  + +TQ +TS   + Y   DF   +E+A LLF M I KFE++S+++VDP++ WA IGAIGG WQ+VV+AFGLF VFSEKQLP+ K+R+FK+   KPA+   R  +S +S  PT P +                      D   + LP GWV R    G TYY N L
Sbjct:  161 ADEASLAIQEAYPHCRVLPTSKLTVNQTGIDNGDINHFYATFGVGGDGRDNASCALLWDEDPHDDFDPAVELASRGVSINTQFVNLFFVDVDLGVEAIGEELTDAKLPYNRLSPTTNGSMVGTMSHMVIEMTQFQPISTSSGEKQDPQRTFTQSSTSATVNWY-NPDF--NEELAALLFNMFIPKFEYTSIEQVDPVDGWAIIGAIGGVWQFVVIAFGLFFVFSEKQLPDKKIRNFKKSVAKPASMVKRHLSSASSRDPTIPDV--------------------EIDTSNEDLPIGWVKRQRKNGTTYYYNPL 450          
BLAST of mRNA_S-dermatodea_contig1277.1691.1 vs. uniprot
Match: D8LQB8_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB8_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 7.920e-56
Identity = 125/310 (40.32%), Postives = 175/310 (56.45%), Query Frame = 0
Query:    2 ADDESLAFEEAFPRCKVLRSSMLTVNQTGVDNGDVQALSATFLATWLDNPEG------EANEDDTFLFTQFVEAYFIDVERGPNALDGKPIDAFLPYERLTPVGNTTNPTLLNHM---------VLTFTEFTRL-TKSGTKRETDKIYTQRTTSGRAHLYLEDDFPSTDEVAFLLFQMVINKFEFSSVDEVDPLNPWATIGAIGGAWQYVVLAFGLFCVFSEKQLPEFKMRDFKQMTWKPANPFAR-AASTTSNAPTKPTIGPRAAESQGSASTATWGMSNRGDVGGDILPPGWVMRSDGEGRTYYKNTL 294
            AD+ SLA +EA+P C+VL +S LTVNQTG++NGD+    A F   W ++P        E       + TQFV  +F+DV+ G  A+  +  DA LPY+RL+P  + +    ++HM         V+  T+F  + T SG K++  + +TQ +TS   + Y   DF   +E+A LLF M I KFE++S+++VDP++ WA IGAIGG WQ+VV+AFGLF VFSEKQLP+ K+R+FK+   KPA+   R  +S  S  PT P +                      D   + LP GWV R    G TYY N L
Sbjct:  133 ADEASLAIQEAYPHCRVLPTSKLTVNQTGIENGDINHFYAIFGLLWDEDPHDDFDPAVELASTGVSINTQFVNLFFVDVDLGVEAIGEELTDAKLPYDRLSPTTSGSMVGTMSHMKSCWATTGQVIEMTQFQPISTSSGQKQDPQRTFTQSSTSATVNWY-NPDFD--EELAALLFNMFIPKFEYTSIEQVDPVDGWAIIGAIGGVWQFVVIAFGLFFVFSEKQLPDKKIRNFKKSVAKPASMVNRHLSSANSRDPTTPDV--------------------EIDASNEDLPIGWVKRQRKNGTTYYYNLL 419          
BLAST of mRNA_S-dermatodea_contig1277.1691.1 vs. uniprot
Match: D7FP34_ECTSI (Similar to neural cell expressed, developmentally down-regulated 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP34_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 1.830e-53
Identity = 132/374 (35.29%), Postives = 188/374 (50.27%), Query Frame = 0
Query:    9 FEEAFPRCKVLRSSMLTVNQTGVDNGDVQALSATFLATWLDNPEGEANEDDTF-------LFTQFVEAYFIDVERGPNALDGKPIDAFLPYERLTPVGNTTNPTLLNHMVLTFTEFTRLTKSGTKRETDKIYTQRTTSGRAHLYLEDDFPSTDEVAFLLFQMVINKFEFSSVDEVDPLNPWATIGAIGGAWQYVVLAFGLFCVFSEKQLPEFKMRDFKQMTWKPANPFAR-------AASTTSNAPT--------------------------------KPTIGPRAAESQGSA----STATWGMSNRGD----VGGDILPPGWVMRSDGEGRTYYKNTLLKTTQWEPPYQRDQSCRGGT--VQMVDAPMLQMR 326
            FEE +P CK +  SM+TV++TGV NG V + S  F   W        +E DTF       +  QF++ Y I  +    +     +DA +PY RL    +T     +NHMVL  TEFT + ++G K+E  + ++Q T +G  H +   +   + E  F + ++ I KFEF+S++EVDP++ W+ IGAIGG WQ+VV  FGLF VFSEKQ P+ KMR+F++   KPA  FA         +S +SN                                   K T  P   ++ G +    S +  G   +G+         LP GW+  +DG+G+ YY +T+ KTTQWE P QR+ S  G     Q VDAPM Q R
Sbjct:  141 FEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYVLW--------DEKDTFYDHSYYLINRQFLDMYLIPPDSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLGVTEFTGINENGNKKEKQRSFSQATITGVEHWWWGAEDYDSVEFGFFMVELSIGKFEFTSIEEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVFSEKQSPDRKMRNFRKSIGKPAE-FANKRLSILNTSSRSSNQDVEIDASEEDLPVEWVKKQRPNGSIYYFNVMTGAKQTASPNHLDNAGGSAPPPSNSALGRIFQGNRSARPNSGPLPAGWIEGTDGDGKKYYLDTINKTTQWERPLQREHSSGGPDRRPQAVDAPMSQSR 505          
BLAST of mRNA_S-dermatodea_contig1277.1691.1 vs. uniprot
Match: A0A6H5JZ12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ12_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.090e-33
Identity = 103/324 (31.79%), Postives = 155/324 (47.84%), Query Frame = 0
Query:    4 DESLAFEEAFPRCKVLRSSMLTVNQTGVDNGDVQALSATFLATWLDNP-EGEANED----------DTF------LFTQFVEAYFIDVERGPNALDGKPIDAFLPYERLTPVGNTTNPTLLNHMVLTFTEFTRLTKSGTKRETDKIYTQRTTSGRAHLYLEDDFPSTDEVAFLLFQMVINKFEFSSVD------EVDPLNPWATIGAI-GGAWQYVVLAFGLFCVFSEKQLPEFKMRDFKQMTWKPANPFARAASTTSNAPTKPTIGPRAAESQGSASTATWGMSNRGDVGGDILPPGWVMRSDGEGRTYYKNTLLKTTQWEPP 303
            D + A EE FP C+V   S LT+++ G+++GDV +L A+F         + EA  D          DTF      +  QF+  Y IDVE G   L+GK +D  LPY R+ P+ +T    + NHMV+  TEF  +  +G + E  + Y+Q TT+G  + Y  D+     E A ++  + I KFE++ +         + ++PW  +      A ++VV  FGLF VFS KQ P+ KMR+F++   KPA+   +  ST         +G R         ++T       D   + LP  WV +    G  YY + L    Q  PP
Sbjct:  148 DATSAIEEEFPHCRVFPLSRLTIDEDGINSGDVDSLYASFYVREKKRAGQSEAASDGEQFLWYESADTFDRATYNINAQFLSTYLIDVEAGVEPLEGKSVDVKLPYARIEPITDTEFTAIANHMVVGLTEFAGIDDNGNREERQRTYSQSTTTGTQNWYWTDETYDF-EFALMIVDVSIPKFEYTFIAVSMNQRSKEEVSPWFALPPFKDSAAEFVVTGFGLFFVFSVKQSPDRKMRNFRKSVTKPASIVNKRLST---------LGSR---------SSTSNQDIELDSSEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPP 452          
BLAST of mRNA_S-dermatodea_contig1277.1691.1 vs. uniprot
Match: A0A6H5JBE8_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE8_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 4.760e-26
Identity = 94/334 (28.14%), Postives = 146/334 (43.71%), Query Frame = 0
Query:    9 FEEAFPRCKVLRSSMLTVNQTGVDNGDVQALSATF-----------LATWLDNPEGEA------------NEDDTF-------LFTQFVEAYFIDVERGPNALDGKPIDAFLPYERLTPVGNTTNPTLLNHMVLTFTEFTRLTKSGTKRETDKIYTQRTTSGRAHLYLEDDFPSTDEVAFLLFQMVINKFEFSSVDEVDPLNPWATIGAIGGAWQYVVLAFGLFCVFSEKQLPEFKMRDFKQMTWKPANPFARAASTTSNAPTKPTIGPRAAESQGSASTATWGMSNRG-----DVGGDILPPGWVMRSDGEGRTYYKNTLLKTTQWEPPYQRD 307
            FEE +P CK +  SM+TV++TGV NG V + S  F           +  W+D     A            +E  T+       +  QF++ Y I       +     +DA +PY RL    +T     +NHMVL+ TEFT + K+G K E ++ ++Q   +G  H +   +  ++ E  F + ++ I KFEF+S++                  ++VV  FGLF VFSE+Q P+ + R+F++   KPA  FA    ++ N                     ++  SNR      D  G+ LP  WV +    G  YY N +    Q   P + D
Sbjct:  178 FEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYVRIPVQSAGLVVAWVDRRYNRAWVWCIRSNQVLWDEKGTYYDHSYYLINRQFLDLYLIPPGSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLSLTEFTGINKNGNKEEKERSFSQTAITGVEHWWWGYEDYNSVEFGFFMVELSIGKFEFTSIEV-----------------EFVVTGFGLFFVFSERQSPDRRFRNFRKSIRKPAE-FAGNRLSSLN--------------------ISFRSSNRNQDVEIDASGEDLPVEWVKKQRPNGSIYYFNVMTGAKQTASPNRLD 473          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1277.1691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FP33_ECTSI2.060e-5734.17E3 ubiquitin-protein ligase, putative n=1 Tax=Ecto... [more]
A0A6H5JSI3_9PHAE4.940e-5740.89WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LQB8_ECTSI7.920e-5640.32WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
D7FP34_ECTSI1.830e-5335.29Similar to neural cell expressed, developmentally ... [more]
A0A6H5JZ12_9PHAE1.090e-3331.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE8_9PHAE4.760e-2628.14WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 273..305
e-value: 2.2E-9
score: 47.2
IPR001202WW domainPFAMPF00397WWcoord: 274..303
e-value: 1.8E-10
score: 40.7
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 278..303
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 272..305
score: 14.639
NoneNo IPR availableGENE3D2.20.70.10coord: 272..323
e-value: 2.8E-11
score: 44.8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 206..411
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..205
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 274..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1277contigS-dermatodea_contig1277:3957..9429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1277.1691.1mRNA_S-dermatodea_contig1277.1691.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1277 597..10687 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1277.1691.1 ID=prot_S-dermatodea_contig1277.1691.1|Name=mRNA_S-dermatodea_contig1277.1691.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=412bp
MADDESLAFEEAFPRCKVLRSSMLTVNQTGVDNGDVQALSATFLATWLDN
PEGEANEDDTFLFTQFVEAYFIDVERGPNALDGKPIDAFLPYERLTPVGN
TTNPTLLNHMVLTFTEFTRLTKSGTKRETDKIYTQRTTSGRAHLYLEDDF
PSTDEVAFLLFQMVINKFEFSSVDEVDPLNPWATIGAIGGAWQYVVLAFG
LFCVFSEKQLPEFKMRDFKQMTWKPANPFARAASTTSNAPTKPTIGPRAA
ESQGSASTATWGMSNRGDVGGDILPPGWVMRSDGEGRTYYKNTLLKTTQW
EPPYQRDQSCRGGTVQMVDAPMLQMRQRFNSGDRTRNNGEKKVDTDSESS
STAIVSQGGTCLESVLTAGAGAATVEDAALPSNKSKRHTEDGNSYRANYT
NMKTQWRAPGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf