mRNA_S-dermatodea_contig8760.16911.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8760.16911.1
Unique NamemRNA_S-dermatodea_contig8760.16911.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8760.16911.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 2.850e-74
Identity = 166/369 (44.99%), Postives = 219/369 (59.35%), Query Frame = 1
Query:   70 SGGRGKNESLSAWRSRL----QAELFEQKRAEXXXXXXXXXEEHARLEPGGTKAAPAGRISSS--------MFRVQVASFAELDELTRENHETLQEIKELLEKPAAGIVPSGTELTDADKLQELDKLVAMAKTLGDVASRHIEDEDIQRKEMTLGPFPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWLASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLARSLALRLTDGLTDDTIATSCESTSIQGS-------------------GALADGVGEEDFMEWFVEEFASCDFSNCGAAAEIREVQAGRRLGRLHLHKLLTAVGQDCLQGTNNTWEKVKHL 1083
            +GG  + ESL +WR+RL    QA + E  +AE          +  +  PG T  A    IS S        M + Q++SF+ L  L   +H+ L+++++L+E         GT L++   L EL++LVAMA+ LGD+ SRH+ +EDIQR+E+ L P PKAYY AIR+GLCNAY AASVV S LV TSK G MG AG   + +S AVP+V  LA  A AALKAGD  +QTRRV KI D+APD+ +C  LAR+LAL+L+DG  D T+ T+ ++   +GS                   GA  D   EE  M+WFVEE A  + +N  A      VQAGR+LG+ HL  LL AVG+DCL+GTN   EKVK L
Sbjct:  340 TGGPTRGESLDSWRARLRQQEQAAVREDTKAENPAARTSSSTQGDK--PGKTDRATTEPISGSSREADMDHMTQAQISSFSALSTLCGGSHKRLEQVRQLVEALDINRFSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTT-DTAEERGSHATAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVL 705          
BLAST of mRNA_S-dermatodea_contig8760.16911.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 2.080e-71
Identity = 161/364 (44.23%), Postives = 213/364 (58.52%), Query Frame = 1
Query:   76 GRGKNESLSAWRSRL--QAELFEQKRAEXXXXXXXXXEEHARLEPGGTKAAPAGRISSS--------MFRVQVASFAELDELTRENHETLQEIKELLEKPAAGIVPSGTELTDADKLQELDKLVAMAKTLGDVASRHIEDEDIQRKEMTLGPFPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWLASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLARSLALRLTDGLTDDTIATS-------CESTSIQGS-----------GALADGVGEEDFMEWFVEEFASCDFSNCGAAAEIREVQAGRRLGRLHLHKLLTAVGQDCLQGTNNTWEKVKHL 1083
            G  K+ESL +WR+RL  Q +  E++  +               +PG    A  G IS S        M + Q++SF+ L  L    H++L+++++L+E         GT L++   L E+++LVAMA+ LG + SRH+ +EDIQR+E+ L P PKAYY AIR+GLCNAY AASVV S LV TSK G MG AG   + +S AVP+V  LA  A AALKAGD  +QTRRV KI D+APD+ +C  LAR+LAL+L+DG  D T+ T+         +T+  G            GA  D   EE  M+WFVEE A  + +N  A      VQAGR+LG  HL  LL AVG+DCL+GTN   EKVK L
Sbjct:  554 GPAKDESLDSWRARLRQQEQAAEREDTKAENPAARTSSSTQGDKPGKPDRATTGPISGSSREADMDDMTQAQISSFSALSTLCGGRHKSLEQVRQLVEALGINRSSPGTGLSETGTLGEVNRLVAMAEDLGGMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGAAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVL 917          
BLAST of mRNA_S-dermatodea_contig8760.16911.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.230e-70
Identity = 163/367 (44.41%), Postives = 210/367 (57.22%), Query Frame = 1
Query:   73 GGRGKNESLSAWRSRL----QAELFEQKRAEXXXXXXXXXEEHARLEPGGTKAAPAGRISSS--------MFRVQVASFAELDELTRENHETLQEIKELLEKPAAGIVPSGTELTDADKLQELDKLVAMAKTLGDVASRHIEDEDIQRKEMTLGPFPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWLASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLARSLALRLTDGLTDDTIAT-------SCESTSIQGS-----------GALADGVGEEDFMEWFVEEFASCDFSNCGAAAEIREVQAGRRLGRLHLHKLLTAVGQDCLQGTNNTWEKVKHL 1083
            GG  K+ESL +WR+RL    QA + E  +AE          +  +  PG    A    IS S        + + Q++SF+ L  L   +  +L+++ +L+E         GT L     L EL++LVAMA+ LGD+ SRH+ +EDIQR+E+ L P PKAYY AIR+GLCNAY AASVV S LV TSK G MG AG   + +S AVP+V  LA  A AALKAGD  +QTRRV KI D+APD+ +C  LAR+LAL+L+DG  D T+ T          +T+  G            GA  D   EE  M+WFVEE A  + +   A      VQAGR+LG  HL  LL AVG+DCL+GTN   EKVK L
Sbjct:  368 GGPAKDESLDSWRARLRQQEQAAVREDTKAENPAVRTSSSTQGDK--PGKPDGATTEPISGSSREADMDHITQAQISSFSSLSTLCGGSQASLEQVGQLVEALGINRSSPGTGLNGTGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVEGECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVL 732          
BLAST of mRNA_S-dermatodea_contig8760.16911.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 1.780e-65
Identity = 147/315 (46.67%), Postives = 196/315 (62.22%), Query Frame = 1
Query:  184 EHARLEPGGTKAAPAGRISSSMFRVQVASFAELDELTRENHETLQEIKELLEKPAAGIVPSGTELTDADKLQELDKLVAMAKTLGDVASRHIEDEDIQRKEMTLGPFPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWLASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLARSLALRLTDGLTDDT---------IATSCESTSIQGSGA------LADGVGEEDFMEWFVEEFASCDFSNCGAAAEIREVQAGRRLGRLHLHKLLTAVGQDCLQGTNNTWEKVKHL 1083
            E+A L PG  KAA   R+    FRVQ++S A LD L +EN E L++I+ +++ PAAG      EL+D ++ ++L  L+ MAK LG+VA  H ED+D+QRKE+ L PF KAYY A+RSGLCNAY AASV+ S  VSTSK G MGK GTA  L+S AVP++  LA  AG AL+ GD  +QTRR+ KIT +A D +EC  LAR LAL+LTDGL DDT         + T   +    GSG+      L D + E+D  E  +EE A  + S+ G          G+RLG+ HL KLL A+ + CL G++   +K++ L
Sbjct:  461 ENASLSPG--KAAEVDRL----FRVQLSSSAGLDSLIKENPEALEDIQRVIKAPAAGGFYFDDELSDMERRRKLGALMNMAKALGEVALSHTEDKDVQRKELALAPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTSKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHYLQTRRLAKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDETDQVCTHTTAGMNGGSGSGRDADILPDIIIEDDVFEHLLEEVARYERSDHG----------GKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMELL 759          
BLAST of mRNA_S-dermatodea_contig8760.16911.1 vs. uniprot
Match: D7G1L2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 1.420e-64
Identity = 135/312 (43.27%), Postives = 184/312 (58.97%), Query Frame = 1
Query:  184 EHARLEPGGTKAAPAGRISSSMFRVQVASFAELDELTRENHETLQEIKELLEKPAAGIVPSGTELTDADKLQELDKLVAMAKTLGDVASRHIEDEDIQRKEMTLGPFPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWLASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLARSLALRLTDGLTDDTIATSCESTSI------------QGSGALADGVGEEDFMEWFVEEFASCDFSNCGAAAEIREVQAGRRLGRLHLHKLLTAVGQDCLQGTNNTWEKVKHL 1083
            EHA L PG  +          M R Q +S A L  L REN E L++I+ ++E      +    EL+D    + L  LV M+  LG+VA +H ED  ++RKE+ L PF K YY+A+RSGLC AY AASV+ S  VSTSK G MGK G A KL+SGAVP++G L   AG AL+AGD  +QTRR+VKIT +APD VEC  LAR LAL+LTDGL ++  AT  ++  +            +G+  +   + EED  ++ +EE  + + ++ G          G+RLG+ HL KLL A+   CL G+N T +K+K L
Sbjct:  149 EHASLSPGKAEEV------DPMVRAQFSSSAGLGPLIRENPEALEDIQRVIEATTVRSIHPDDELSDIQSRRNLGTLVTMSTALGEVALKHTEDMSVRRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSNWVSTSKTGGMGKVGAALKLMSGAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSGCGRGADMMPGDMSEEDVFKYLLEEVTAYERNDHG----------GKRLGKKHLRKLLKAIQGGCLDGSNGTVQKIKIL 444          
BLAST of mRNA_S-dermatodea_contig8760.16911.1 vs. uniprot
Match: D7FHA2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA2_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 1.810e-64
Identity = 155/384 (40.36%), Postives = 210/384 (54.69%), Query Frame = 1
Query:   31 TALKELNLWNNQLSGGRGKNESLSAWRSRL------QAELFEQKRAEXXXXXXXXXE--------------EHARLEPGGTKAAPAGRISSSMFRVQVASFAELDELTRENHETLQEIKELLEKPAAGIVPSGTELTDADKLQELDKLVAMAKTLGDVASRHIEDEDIQRKEMTLGPFPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWLASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLARSLALRLTDGLTDDTIATSCE---------------STSIQGSGALADGVGEEDFMEWFVEEFASCDFSNCGAAAEIREVQAGRRLGRLHLHKLLTAVGQDCLQGTNNTWEKVK 1077
            T LK      N+L+GG    E L +WR RL      + ++F   R E                        EHA L P   KA  A R+    F+ Q++S A LD L REN   L++I+ ++E   AG V    EL+D    ++L  LV M+  LG+V  +H ED D++R+E+TL PF KAYY A+R+G+CNAY AASV+ S  VSTSK G MGKAG A K++S A+P+VG     AG A+K+GD  +QTRR+VKIT +A DA+EC  LAR LAL+L  GL +D  A + E               S S QG  +L   + E D  E+ ++E ASC  ++ G          G+RLG+ HL KLL AV + CL G + T +K +
Sbjct:  235 TGLKAFLRRGNRLTGGPAYGEGLDSWRERLAPKHKTKLQIFRGDRMEKDAPVPPGSRNGRHEAVGERVRSPEHASLSP--EKAEEADRV----FKAQLSSSAGLDSLIRENPGALEDIQRVIEASVAGSVSVDNELSDMQSRRKLGTLVTMSTALGEVVLKHTEDMDVKREELTLPPFSKAYYTAVRTGICNAYLAASVIDSDWVSTSKTGGMGKAGAALKVMSRAIPVVGGPTGLAGKAMKSGDHYLQTRRLVKITAMAHDAIECCSLARRLALQLAGGLRNDANAGANEVDHIRADITAGMNGGSGSGQGPNSLPAIMSEGDVFEYVLKEVASCGHNDHG----------GKRLGKKHLRKLLKAVQRGCLDGLSCTEQKAR 602          
BLAST of mRNA_S-dermatodea_contig8760.16911.1 vs. uniprot
Match: A0A6H5KZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 1.900e-64
Identity = 146/315 (46.35%), Postives = 192/315 (60.95%), Query Frame = 1
Query:  184 EHARLEPGGTKAAPAGRISSSMFRVQVASFAELDELTRENHETLQEIKELLEKPAAGIVPSGTELTDADKLQELDKLVAMAKTLGDVASRHIEDEDIQRKEMTLGPFPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWLASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLARSLALRLTDGLTDDTIATSCESTSI-----------QGSGALAD----GVGEEDFMEWFVEEFASCDFSNCGAAAEIREVQAGRRLGRLHLHKLLTAVGQDCLQGTNNTWEKVKHL 1083
            EHA L P   KA    R+    FRVQ++S A  D L REN E L++I  +++ PAAG +    E++D ++ ++L  LV MAK LG+VA  H ED D+QRKE+ L PF KAYY A+RSGLCNAY AASV+ S  VST K G MGK GTA  L+S AVP++  LA  AG AL+ GD  +QTRR+VKIT +A D +EC  LAR LAL+LTDGL DDT     E+  +            GSG  AD     + E+D  E+ +EE A  + S+ G          G+RLG+ HL KLL A+ + CL G++   +K++ L
Sbjct:  421 EHASLSP--EKAEEVDRL----FRVQLSSSAGFDSLIRENPEALEDIHRVIKAPAAGSLDFVDEISDMERRRKLGTLVNMAKALGEVALSHTEDMDVQRKELALTPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTCKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHCLQTRRLVKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDEADQVYTHITAGMNGGSGSGRDADISPDDMIEDDVFEYLLEEVARYERSDHG----------GKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMEAL 719          
BLAST of mRNA_S-dermatodea_contig8760.16911.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.710e-62
Identity = 139/318 (43.71%), Postives = 181/318 (56.92%), Query Frame = 1
Query:  193 RLEPGGTKAAPAGRISSS---------MFRVQVASFAELDELTRENHETLQEIKELLEKPAAGIVPSGTELTDADKLQELDKLVAMAKTLGDVASRHIEDEDIQRKEMTLGPFPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWLASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLARSLALRLTDGLTDDTIATSCESTSI------------QGSGALADGVGEEDFMEWFVEEFASCDFSNCGAAAEIREVQAGRRLGRLHLHKLLTAVGQDCLQGTNNTWEKVKHL 1083
            R E     A   GR S+S         +FR Q+ S A LD L REN   L+ I+  +E+  AG      EL D    + L  LV M+  LG+VA RH ED ++QRKE+ L PF KAYY AIR+GLC AY AAS + S  V TSK G MGK G A KL+S AVP++G L   AG AL+AGD  +QTRR+VKIT +APD VEC  LAR LAL+LTDGL ++  AT  ++  +            +G+  +   + EED  ++ +EE            A+ R    G+RLG+ HL KLL A+   CL G+N T +K+K L
Sbjct:  332 RQEVVAGSANSTGRASTSPEKAEEVDRLFRAQLVSSAGLDSLIRENPAALENIQLAIERQVAGSFYPDNELGDMQSRRNLGTLVTMSTALGEVALRHTEDMNVQRKELALPPFSKAYYTAIRTGLCKAYLAASAIDSDWVITSKTGGMGKVGAALKLMSSAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSGCGRGADMMPGDMSEEDVFKYLLEE----------VTADERNDHGGKRLGKRHLRKLLKAIQGGCLDGSNGTVQKIKIL 639          
BLAST of mRNA_S-dermatodea_contig8760.16911.1 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.160e-61
Identity = 142/309 (45.95%), Postives = 188/309 (60.84%), Query Frame = 1
Query:  184 EHARLEPGGTKAAPAGRISSSMFRVQVASFAELDELTRENHETLQEIKELLEKPAAGIVPSGTELTDADKLQELDKLVAMAKTLGDVASRHIEDEDIQRKEMTLGPFPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWLASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLARSLALRLTDGLTDDTIATSCESTSIQ---------GSGALADGVGEEDFMEWFVEEFASCDFSNCGAAAEIREVQAGRRLGRLHLHKLLTAVGQDCLQGTNNTWEKVKHL 1083
            E A L PG  KA    R+    F  Q++S A LD L RE  + L++I+ ++E   AG V    +L+D D  ++L  LV M+  LG+VA RH ED +IQRKE+ L  F  AYY+A+RSGLC AY AASV+ S  VSTSK G MGKAG A KL+S AVP+VG L   AG AL+AGD  +QTRR+VKIT +A DAV+C  LAR LAL+LTDGL +D  AT+  +  ++         G+      + EED  E+ +EE AS   ++ G          G RLG+ HL KLL A+ +  L G+N T +K++ L
Sbjct:  394 ERASLSPG--KAEEMDRL----FSAQLSSSAGLDSLIREKPKALEDIQRVIESTVAGSVSPDDKLSDIDGRRKLGTLVTMSTALGEVALRHTEDMNIQRKELALPAFSNAYYSAVRSGLCQAYLAASVIDSDWVSTSKTGGMGKAGAAMKLMSSAVPVVGGLPELAGKALEAGDHYLQTRRLVKITAMASDAVDCCFLARRLALQLTDGLRNDAGATADNADEVRVDTTAGMNGGADMTPGDMSEEDVFEYLLEEVASYKRNDHG----------GVRLGKKHLRKLLKAIQRGSLDGSNGTEQKIEVL 686          
BLAST of mRNA_S-dermatodea_contig8760.16911.1 vs. uniprot
Match: A0A6H5JBQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ0_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 8.770e-59
Identity = 137/299 (45.82%), Postives = 174/299 (58.19%), Query Frame = 1
Query:  232 RISSSMFRVQVASFAELDELTRENHETLQEIKELLEKP------AAGIVPSGTELTDADKLQELDKLVAMAKTLGDVASRHIEDEDIQRKEMTLGPFPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWLASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLARSLALRLTDGLTDDTIATSCESTSI---------QGSGALADGVGEEDFMEWFVEEFASCDFSNCGAAAEIREVQAGRRLGRLHLHKLLTAVGQDCLQGTNNTWEKVKHL 1083
            R     FR QVASFA L  LT+ + E L EIK+L+  P      A G+ P+   + +A+ L++L++L  MA TLG++AS H+ED+ +Q +E  L    KAY+ A+R G+CNA+ A+SVVGS LV+TSK G +G AG A  L+S AVPMVG L   A  ALK GD  IQTRRV KI D+A DAVEC  LAR LA                              QG  AL DG GE+D MEWF +E ++ +  +  A     E QAG RLG+ HL  LL AVG  CL+G NN  EKV+ L
Sbjct:  739 RDPGDSFREQVASFAGLAALTKGDREALDEIKQLIRVPPIRAPYADGVSPAPEPIDEAN-LRDLNRLAEMATTLGEIASSHMEDQWMQGREQGLSQARKAYFNAVRDGVCNAFLASSVVGSNLVATSKTGGIGTAGKALALLSAAVPMVGGLGGIAAGALKTGDRYIQTRRVAKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXGWRQGEYALPDGAGEKDVMEWFADEVSNFEPQHRHATRMTPEEQAGSRLGKKHLQTLLLAVGTGCLEGANNIEEKVELL 1036          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8760.16911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7FUA2_ECTSI2.850e-7444.99Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
D7FUA0_ECTSI2.080e-7144.23Leucine Rich Repeat Protein n=1 Tax=Ectocarpus sil... [more]
D7FUA1_ECTSI1.230e-7044.41Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
D7FH89_ECTSI1.780e-6546.67Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
D7G1L2_ECTSI1.420e-6443.27Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FHA2_ECTSI1.810e-6440.36Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KZF6_9PHAE1.900e-6446.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHA3_ECTSI1.710e-6243.71Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FH90_ECTSI1.160e-6145.95Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
A0A6H5JBQ0_9PHAE8.770e-5945.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8760contigS-dermatodea_contig8760:199..3035 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.8
Seed ortholog evalue1.1e-67
Seed eggNOG ortholog2880.D7FUA2
KEGG koko:K04730,ko:K04733
KEGG Pathwayko04010,ko04064,ko04620,ko04621,ko04624,ko04722,ko05133,ko05140,ko05142,ko05145,ko05152,ko05162,ko05164,ko05169,map04010,map04064,map04620,map04621,map04624,map04722,map05133,map05140,map05142,map05145,map05152,map05162,map05164,map05169
KEGG ModuleM00686
GOsGO:0005575,GO:0005623,GO:0005886,GO:0005911,GO:0009506,GO:0016020,GO:0030054,GO:0042995,GO:0044464,GO:0055044,GO:0071944,GO:0090406,GO:0120025
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGs2QQYD@2759,COG4886@1
EC2.7.11.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons7
Model size1083
Cds size1083
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925365.3119013-CDS-S-dermatodea_contig8760:198..2711622925365.3119013-CDS-S-dermatodea_contig8760:198..271Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 199..271 +
1694079883.9820106-CDS-S-dermatodea_contig8760:198..2711694079883.9820106-CDS-S-dermatodea_contig8760:198..271Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 199..271 +
1622925365.328244-CDS-S-dermatodea_contig8760:1022..13961622925365.328244-CDS-S-dermatodea_contig8760:1022..1396Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 1023..1396 +
1694079884.002081-CDS-S-dermatodea_contig8760:1022..13961694079884.002081-CDS-S-dermatodea_contig8760:1022..1396Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 1023..1396 +
1622925365.3405488-CDS-S-dermatodea_contig8760:1597..17651622925365.3405488-CDS-S-dermatodea_contig8760:1597..1765Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 1598..1765 +
1694079884.013583-CDS-S-dermatodea_contig8760:1597..17651694079884.013583-CDS-S-dermatodea_contig8760:1597..1765Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 1598..1765 +
1622925365.3554296-CDS-S-dermatodea_contig8760:2045..21651622925365.3554296-CDS-S-dermatodea_contig8760:2045..2165Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 2046..2165 +
1694079884.0223992-CDS-S-dermatodea_contig8760:2045..21651694079884.0223992-CDS-S-dermatodea_contig8760:2045..2165Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 2046..2165 +
1622925365.3663702-CDS-S-dermatodea_contig8760:2283..23861622925365.3663702-CDS-S-dermatodea_contig8760:2283..2386Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 2284..2386 +
1694079884.032781-CDS-S-dermatodea_contig8760:2283..23861694079884.032781-CDS-S-dermatodea_contig8760:2283..2386Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 2284..2386 +
1622925365.3790052-CDS-S-dermatodea_contig8760:2671..28111622925365.3790052-CDS-S-dermatodea_contig8760:2671..2811Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 2672..2811 +
1694079884.0430236-CDS-S-dermatodea_contig8760:2671..28111694079884.0430236-CDS-S-dermatodea_contig8760:2671..2811Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 2672..2811 +
1622925365.3887746-CDS-S-dermatodea_contig8760:2930..30351622925365.3887746-CDS-S-dermatodea_contig8760:2930..3035Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 2931..3035 +
1694079884.0564868-CDS-S-dermatodea_contig8760:2930..30351694079884.0564868-CDS-S-dermatodea_contig8760:2930..3035Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8760 2931..3035 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8760.16911.1prot_S-dermatodea_contig8760.16911.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8760 199..3035 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8760.16911.1

>prot_S-dermatodea_contig8760.16911.1 ID=prot_S-dermatodea_contig8760.16911.1|Name=mRNA_S-dermatodea_contig8760.16911.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=361bp
GSIPPELGKLTALKELNLWNNQLSGGRGKNESLSAWRSRLQAELFEQKRA
EQERTQQSRAEEHARLEPGGTKAAPAGRISSSMFRVQVASFAELDELTRE
NHETLQEIKELLEKPAAGIVPSGTELTDADKLQELDKLVAMAKTLGDVAS
RHIEDEDIQRKEMTLGPFPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKV
GVMGKAGTAFKLISGAVPMVGWLASFAGAALKAGDCLIQTRRVVKITDLA
PDAVECSKLARSLALRLTDGLTDDTIATSCESTSIQGSGALADGVGEEDF
MEWFVEEFASCDFSNCGAAAEIREVQAGRRLGRLHLHKLLTAVGQDCLQG
TNNTWEKVKHL
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mRNA from alignment at S-dermatodea_contig8760:199..3035+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8760.16911.1 ID=mRNA_S-dermatodea_contig8760.16911.1|Name=mRNA_S-dermatodea_contig8760.16911.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2837bp|location=Sequence derived from alignment at S-dermatodea_contig8760:199..3035+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGCTCCATCCCCCCGGAGCTGGGAAAACTCACAGCACTCAAGGAGCTAAA CCTTTGGAACAACCAGCTGAGCGGTGAGCCATCAAGTTTAATGCGGTACT GTCATTAAAGTCTCTGGCTGCGGATGAATCCCGCCAACTGCGTGGGTGGG ATTTAAGCATGATGTTTCCACAGAATTCGTCAAAAAAGGCACGCATCACA TAATTGACGCATTTCTCACCAGTAAGCTGGTTGTCGTTGATCCAAAGCGT CTCCAGCATGCTCAGGGCTCCTAGCTCCTTGGGGATGTGTCCTGATGAAA TAGAATGGTATTGGGATTTGGGAAGGGAATTACTCGCATCTTGTCTTTTT TCTAGATCATCGATCTCCGTAGAACTTGTCCCACCCACGCGTTGGCAGGA CACATTGTTCGAAAATGAGCAAGACGTACGAAGTTCCTTTTGATACATCC CTCACCGCGGGGGCGGGGCACATGTTCTATGGAAACTCATATGCTAGAGT CTATATCTCAAAGTCGTGGTTCATTCCCCCCGCCTTTACGTTGGTTCACT TCCCGCCCAAGCCAAGATATATGAGTTTGGTAGGGGCTCCCAGATATTGT TTTCCGTTAACGCTTCTAGAGCTTGTGTGTCTCTCCAGCTTCTGCGCGCT TTTCATGAAGTGTTGTCAAATGTATGTTCAGCAATCTCGCTGTTCATACA TATATATATTTCATATTTGTTAATTTGCGCCGGAGCAGTACCTTAGGAAG GACAATGTGACGGCACATCCCGCAGTCTTGTTCTTTCTTCGAATCGATGA CGTATTCCCCTCTCGCCATTACAGGGGGACGTGGGAAGAACGAGTCATTG TCGGCATGGAGAAGCCGGCTGCAGGCGGAGTTATTCGAGCAAAAACGGGC CGAGCAGGAACGCACCCAGCAGAGTCGGGCTGAGGAACACGCAAGATTGG AGCCGGGGGGGACAAAAGCCGCTCCCGCTGGACGCATTTCCTCGTCCATG TTTCGGGTGCAGGTTGCTTCCTTTGCAGAGTTGGATGAGCTCACCCGAGA GAATCACGAAACTCTGCAGGAGATTAAAGAACTCCTCGAAAAACCGGCCG CTGGTATCGTTCCTTCCGGCACTGAGCTCACTGATGCGGACAAGCTGCAG GAGCTCGACAAGCTGGTAGCGATGGCCAAGACTCTAGGCGATGTGGCGGT GAGTGCTACATGAAAGATATCTCTTGGTCGCAGCAACTATGGGAGACTCT GTTGGGCCAAATGGCGTTTTCCCCTTGGTGTTGATATTTTACTCCTGGTT CCTTTCCCCAACGGCGCATGCATCGAGCACGTACTATTTCGGCCTCTTTG ATTGCTTTCAACGTGAGGTGGAATTTCGCCATGTTGCCCAACTTTACAGT CGAGACACATAGAGGACGAGGACATACAGCGGAAGGAGATGACCTTGGGC CCGTTCCCCAAGGCATACTACGCCGCCATCAGAAGCGGCCTATGCAACGC GTACTTCGCTGCCAGCGTGGTCGGCAGTGGCTTGGTGTCCACGAGCAAAG TTGGTGTCATGGGCAAGGTGAGTGCCGTGGTTAGCCGAGCTCATACATGT GTTGACCATGATGGGTCGCCCTCACGGCCTGAAGGTATCATTGTTACCGT TAAGGGAAAGTATCGCTGTGAAGGCAAGAACACTGATTTTGACTCCGACC CCAAAGCATACCGGAGGTGTAGTCCGACGTGCGCAGAATAGATGAGATTG GAACCAAGAAAGGAAAGAATCGACCCTTGTTTTTTGTGCAAAGCTTGTCG TGCTTATGTGCCAACCGAAAAGCGACTCGGCTGTTTCCGTCGTGCAGGCA GGGACGGCCTTCAAGCTGATTTCTGGCGCAGTTCCCATGGTCGGCTGGCT AGCTAGCTTCGCGGGCGCCGCATTGAAGGCCGGAGACTGCCTTATTCAAA CTCGACGAGTGGTAAAGGTGATCTTGGTTTCGTACTTGCGGTGTCTCGGA TCACGACACACGTGCTCGCATGCCCAGCCTGCGATGGTTTTGAAGAGCGC CAACCAAGCCCACTTGATTTGTTTTTTCTTGGCAGATCACCGATTTAGCG CCGGATGCGGTTGAGTGTTCTAAGCTTGCGAGGAGTTTGGCCCTACGACT CACCGACGGTCTTACGGATGACACCATCGCCACGTCGTGTGCCAAAATAA AAAATACGCACAATGCAGCGGGTGTAGGCTGGGGTGCAGGTGAGGGTGAT GTTTGACAATGGCCAAAGGTCCAAGCACATTGTTTGTGCAAAAACATGGG ACCTAGCCAAGACCAAGATGTGGTCGTGTAGACGTGTATTCTCACACATT GCGTGTACTCCGAACGCCTGGCAGTTCGATCACCTTCAGCAGAGACACGG CTGCACAGGATTCGGATTCACAATGTTCCGTTTTGATGACAAATCGTGTG TGGTGGTGTTTCCCGTGTTTCAGGCGAGTCCACATCAATTCAGGGCTCTG GCGCCTTGGCAGACGGTGTGGGCGAGGAAGACTTTATGGAGTGGTTTGTC GAAGAGTTTGCGAGCTGCGATTTTAGCAACTGCGGAGCAGCGGCAGAGAT CCGGGAGGTGCAGGTGAACCATTCGTAGAATGGTCTCGGCGCTTCGACCT TTTTTGATCCGCTGAACAATGCTCTTCCGCTACGATAAACATGCTTGTTT GACATATTTCATGCGCGCCTTCATGTCTCCAGGCTGGGAGGCGGCTTGGC AGGCTACACCTGCACAAGCTGTTGACGGCGGTGGGTCAGGATTGCCTTCA GGGTACGAACAACACCTGGGAAAAGGTAAAACACTTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8760:199..3035+

>mRNA_S-dermatodea_contig8760.16911.1 ID=mRNA_S-dermatodea_contig8760.16911.1|Name=mRNA_S-dermatodea_contig8760.16911.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2166bp|location=Sequence derived from alignment at S-dermatodea_contig8760:199..3035+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGCTCCATCCCCCCGGAGCTGGGAAAACTCACAGCACTCAAGGAGCTAAA
CCTTTGGAACAACCAGCTGAGCGGGCTCCATCCCCCCGGAGCTGGGAAAA
CTCACAGCACTCAAGGAGCTAAACCTTTGGAACAACCAGCTGAGCGGGGG
ACGTGGGAAGAACGAGTCATTGTCGGCATGGAGAAGCCGGCTGCAGGCGG
AGTTATTCGAGCAAAAACGGGCCGAGCAGGAACGCACCCAGCAGAGTCGG
GCTGAGGAACACGCAAGATTGGAGCCGGGGGGGACAAAAGCCGCTCCCGC
TGGACGCATTTCCTCGTCCATGTTTCGGGTGCAGGTTGCTTCCTTTGCAG
AGTTGGATGAGCTCACCCGAGAGAATCACGAAACTCTGCAGGAGATTAAA
GAACTCCTCGAAAAACCGGCCGCTGGTATCGTTCCTTCCGGCACTGAGCT
CACTGATGCGGACAAGCTGCAGGAGCTCGACAAGCTGGTAGCGATGGCCA
AGACTCTAGGCGATGTGGCGGGGGACGTGGGAAGAACGAGTCATTGTCGG
CATGGAGAAGCCGGCTGCAGGCGGAGTTATTCGAGCAAAAACGGGCCGAG
CAGGAACGCACCCAGCAGAGTCGGGCTGAGGAACACGCAAGATTGGAGCC
GGGGGGGACAAAAGCCGCTCCCGCTGGACGCATTTCCTCGTCCATGTTTC
GGGTGCAGGTTGCTTCCTTTGCAGAGTTGGATGAGCTCACCCGAGAGAAT
CACGAAACTCTGCAGGAGATTAAAGAACTCCTCGAAAAACCGGCCGCTGG
TATCGTTCCTTCCGGCACTGAGCTCACTGATGCGGACAAGCTGCAGGAGC
TCGACAAGCTGGTAGCGATGGCCAAGACTCTAGGCGATGTGGCGTCGAGA
CACATAGAGGACGAGGACATACAGCGGAAGGAGATGACCTTGGGCCCGTT
CCCCAAGGCATACTACGCCGCCATCAGAAGCGGCCTATGCAACGCGTACT
TCGCTGCCAGCGTGGTCGGCAGTGGCTTGGTGTCCACGAGCAAAGTTGGT
GTCATGGGCAAGTCGAGACACATAGAGGACGAGGACATACAGCGGAAGGA
GATGACCTTGGGCCCGTTCCCCAAGGCATACTACGCCGCCATCAGAAGCG
GCCTATGCAACGCGTACTTCGCTGCCAGCGTGGTCGGCAGTGGCTTGGTG
TCCACGAGCAAAGTTGGTGTCATGGGCAAGGCAGGGACGGCCTTCAAGCT
GATTTCTGGCGCAGTTCCCATGGTCGGCTGGCTAGCTAGCTTCGCGGGCG
CCGCATTGAAGGCCGGAGACTGCCTTATTCAAACTCGACGAGTGGTAAAG
GCAGGGACGGCCTTCAAGCTGATTTCTGGCGCAGTTCCCATGGTCGGCTG
GCTAGCTAGCTTCGCGGGCGCCGCATTGAAGGCCGGAGACTGCCTTATTC
AAACTCGACGAGTGGTAAAGATCACCGATTTAGCGCCGGATGCGGTTGAG
TGTTCTAAGCTTGCGAGGAGTTTGGCCCTACGACTCACCGACGGTCTTAC
GGATGACACCATCGCCACGTCGTATCACCGATTTAGCGCCGGATGCGGTT
GAGTGTTCTAAGCTTGCGAGGAGTTTGGCCCTACGACTCACCGACGGTCT
TACGGATGACACCATCGCCACGTCGTGCGAGTCCACATCAATTCAGGGCT
CTGGCGCCTTGGCAGACGGTGTGGGCGAGGAAGACTTTATGGAGTGGTTT
GTCGAAGAGTTTGCGAGCTGCGATTTTAGCAACTGCGGAGCAGCGGCAGA
GATCCGGGAGGTGCAGGCGAGTCCACATCAATTCAGGGCTCTGGCGCCTT
GGCAGACGGTGTGGGCGAGGAAGACTTTATGGAGTGGTTTGTCGAAGAGT
TTGCGAGCTGCGATTTTAGCAACTGCGGAGCAGCGGCAGAGATCCGGGAG
GTGCAGGCTGGGAGGCGGCTTGGCAGGCTACACCTGCACAAGCTGTTGAC
GGCGGTGGGTCAGGATTGCCTTCAGGGTACGAACAACACCTGGGAAAAGG
TAAAACACTTGGCTGGGAGGCGGCTTGGCAGGCTACACCTGCACAAGCTG
TTGACGGCGGTGGGTCAGGATTGCCTTCAGGGTACGAACAACACCTGGGA
AAAGGTAAAACACTTG
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