|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 5 |
| Model size | 1474 |
| Cds size | 831 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig876.16910.1 >prot_S-dermatodea_contig876.16910.1 ID=prot_S-dermatodea_contig876.16910.1|Name=mRNA_S-dermatodea_contig876.16910.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=277bp
MVHSFEKEIAPRRYLSLAAIPLAVEAFGLARAVVWMQDPEVEEGLKVVDW
PMMGGLASYHGRNKDGNTANLFFYNYSDPATSTLMCGGQGQEAISSYFVD
KTTVESSPDELIPGFLDDMLVSELQDLLADALKDGTSWEIGKAGGKLSAK
ALTKLPKAMEKITTKWGNAMLKRVRDELENNRIPEPDPEPDLGCAGGDAC
QCYTVEEVEEILKRDGSVTPVSGTLGLLPVKDHCMPILWKHTCVLLLPAY
YNFQFEGRVLYIHPQLQGRHCRRSCE* back to topmRNA from alignment at S-dermatodea_contig876:21920..24436- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig876.16910.1 ID=mRNA_S-dermatodea_contig876.16910.1|Name=mRNA_S-dermatodea_contig876.16910.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2517bp|location=Sequence derived from alignment at S-dermatodea_contig876:21920..24436- (Saccorhiza dermatodea SderLu1190fm monoicous)
AGGTGAGGACCAAGCAGGCCACCTTGTGACGTGATCATTCATCCAGGGCG
GAGTCTTGGGCGTTTGTTCGAGGTTGCTCGTTTGTTGAGGTTTTTACGGT
CCAGCTTTCTGAAGGTAAAATATGTAGGATGCGTACATCCCCATGTACCC
CATAACCCACCCCTGCTAGCGCGCCTCTCGCACACATAGCCCCGAACATG
GGGGACTGCTGTAGAGACTATACTGCTGTAATGCTAGGTTGCATTGCGCT
AGGTGGGCTCTACAGCGGTCAAGCTTGCTGGAAATCGTCTGGCATGATTA
TGCCTCACGAACGGGTCCACGCTCTGACTTTATGATGGGCCTCGCGGCAC
ATTGCTATATACAACAGACGTAGCTGTGTGCAGAGAATTAGCCGAGCAAA
AATGTCCGCGGCTCTGTCTTGCATCCAGGCTCAATGGCACAACCGGAGCG
GTGGAAGCACTTGCTGGATAACAAGGCGTACAAGGCACACAGCGACTTTC
ATGACTCATCAACGATACTACAAGCACTCCTCCCTGAAGCCTGCATAGCC
GGCCAAAACATCCCGCTAGAGGAGCAGCGTATGCTGATGAGCACGAAGCG
CCGTGTGGATACACGGGGTATAGGAGATTGCGCCGTCATTTCTCTGTTAA
ACGCCCAGCCGGGTGTGTACGTACAATGTACAGTAAATATACGTTCTGGA
ATCTGGACCTTATTGGTGTTGCGGTCTCACTGTTCGTAAATTTAGCGTCG
TTAGGTAGATATGCGTGAGATACCGCGCGACCCGTCGAAACATAAGTAAC
CATACTAGTGGAGCGTTTCGCGCCGCGTATCTTCAGGGAGCTCTCTAGAT
GCCGTACAATGTTCTTGTAGACTATTCGTTTCCATGGCCTTGGCCTGAAC
AGTGTAAATAGTTACTACTATGTGACGTTCATTAAATGTGCTGTCTCATT
TCGCCACGGGGTTGCAGGCGCATGACGTTCCGTTAGCAGAACTGAGCGTG
GCCTACAGACGTATTCGAGACGAAGGCGCCAAACACATGATAGTAGGCTG
TTCGGACCCTGGAGGCGCTCCGGGCTGCCCCATACCGTCGAGTTCTCGAT
TTTGAAGCCGCGCGTTCCCGTTCTGTGGGAATCGGCCTTGGCCAGACAGT
GGAGGGGATGGTGCATTCGTTTGAGAAGGAGATTGCGCCCCGCCGGTACT
TGTCGCTTGCCGCGATACCTCTCGCAGTGGAGGCGTTCGGGCTCGCACGA
GCCGTGGTTTGGATGCAGGATCCCGAGGTGGAAGAAGGCTTGAAGGTCGT
CGATTGGCCTATGGCAAGTCCCTTTTTTGTGGTTTGGCGAGGTTGACGAG
ATGTTAGTATCGGATAACTGACAGACGTTTAATGCTGTCAGTTGGATGAT
ATTGTCGATGGTGTCGCTATCTGTCGGTTGGAGGCTATGGATTATTATTA
TTTAGTTGTACTTGTTTCGTTTTCCCCGCTCGTACCCACAGATGGGTGGT
CTGGCTTCATACCACGGGAGGAACAAAGACGGCAACACTGCCAACCTGTT
CTTCTACAACTACAGTGATCCCGCGACGTCGACGTTGATGTGTGGGGGGC
AGGGGCAGGAGGCCATTTCGAGCTACTTTGTTGACAAGACAACTGTAGAG
AGCTCGCCCGATGAATTGATCCCCGGGTTTTTGGACGACATGTTGGTTAG
TGAGTTGCAGGACTTGCTGGCAGACGCACTCAAGGATGGCACGAGCTGGG
AGATTGGTAAGGCGGGAGGAAAACTATCAGCCAAGGCTCTGACAAAGCTA
CCAAAGGTGAGCTTAGGCAAACGAGGTGGTCTCGCTTAAGTCTATCCCAC
TGCTGTCCTCGGCAGGATTGAGCTAATATCTCTAGCGGTCGGCGTCGTCG
AAATCGCGAGGGGGTGCTCCTGTGTCTAGATTGTGCCATTCAAAGTTCTC
TTTGTGTCAGCTCCCCCTCCCGTTTATGTTTGCGCCTATATATGTTATGT
TTTTCCTGCCGCAATTCATCCTGGTCGACCCGTATTTTGCCTTCTTATGT
TCGGTTGCAGGCCATGGAAAAAATCACAACGAAGTGGGGCAACGCCATGC
TGAAAAGAGTGCGTGACGAGCTGGAGAACAACAGGATACCCGAACCGGAC
CCGGAACCGGACCTTGGCTGCGCTGGTGGCGATGCTTGCCAGTGCTATAC
AGTGGAAGAAGTGGAGGAAATACTGAAGAGGGATGGGTCAGTTACGCCTG
TATCCGGAACATTGGGCTTGTTACCGGTCAAGGATCATTGCATGCCGATA
CTGTGGAAGCACACATGCGTGCTTTTACTGCCTGCGTATTACAACTTCCA
GTTTGAAGGCAGAGTACTCTACATACACCCGCAGTTGCAAGGAAGACATT
GTAGGCGGTCGTGCGAATGACGAACGTGTGCGTCACTGTGTGGAACTCAA
TTGCTGCACTTTGCGTCCCTCCCACCACGCGCTCTGTGCAGGGAGGATAT
ATTGGCTGTGTTAGAGA back to topCoding sequence (CDS) from alignment at S-dermatodea_contig876:21920..24436- >mRNA_S-dermatodea_contig876.16910.1 ID=mRNA_S-dermatodea_contig876.16910.1|Name=mRNA_S-dermatodea_contig876.16910.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at S-dermatodea_contig876:21920..24436- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGCATTCGTTTGAGAAGGAGATTGCGCCCCGCCGGTACTTGTCGCT
TGCCGCGATACCTCTCGCAGTGGAGGCGTTCGGGCTCGCACGAGCCGTGG
TTTGGATGCAGGATCCCGAGGTGGAAGAAGGCTTGAAGGTCGTCGATTGG
CCTATGATGGTGCATTCGTTTGAGAAGGAGATTGCGCCCCGCCGGTACTT
GTCGCTTGCCGCGATACCTCTCGCAGTGGAGGCGTTCGGGCTCGCACGAG
CCGTGGTTTGGATGCAGGATCCCGAGGTGGAAGAAGGCTTGAAGGTCGTC
GATTGGCCTATGATGGGTGGTCTGGCTTCATACCACGGGAGGAACAAAGA
CGGCAACACTGCCAACCTGTTCTTCTACAACTACAGTGATCCCGCGACGT
CGACGTTGATGTGTGGGGGGCAGGGGCAGGAGGCCATTTCGAGCTACTTT
GTTGACAAGACAACTGTAGAGAGCTCGCCCGATGAATTGATCCCCGGGTT
TTTGGACGACATGTTGGTTAGTGAGTTGCAGGACTTGCTGGCAGACGCAC
TCAAGGATGGCACGAGCTGGGAGATTGGTAAGGCGGGAGGAAAACTATCA
GCCAAGGCTCTGACAAAGCTACCAAAGATGGGTGGTCTGGCTTCATACCA
CGGGAGGAACAAAGACGGCAACACTGCCAACCTGTTCTTCTACAACTACA
GTGATCCCGCGACGTCGACGTTGATGTGTGGGGGGCAGGGGCAGGAGGCC
ATTTCGAGCTACTTTGTTGACAAGACAACTGTAGAGAGCTCGCCCGATGA
ATTGATCCCCGGGTTTTTGGACGACATGTTGGTTAGTGAGTTGCAGGACT
TGCTGGCAGACGCACTCAAGGATGGCACGAGCTGGGAGATTGGTAAGGCG
GGAGGAAAACTATCAGCCAAGGCTCTGACAAAGCTACCAAAGGCCATGGA
AAAAATCACAACGAAGTGGGGCAACGCCATGCTGAAAAGAGTGCGTGACG
AGCTGGAGAACAACAGGATACCCGAACCGGACCCGGAACCGGACCTTGGC
TGCGCTGGTGGCGATGCTTGCCAGTGCTATACAGTGGAAGAAGTGGAGGA
AATACTGAAGAGGGATGGGTCAGTTACGCCTGTATCCGGAACATTGGGCT
TGTTACCGGTCAAGGATCATTGCATGCCGATACTGTGGAAGCACACATGC
GTGCTTTTACTGCCTGCGTATTACAACTTCCAGTTTGAAGGCAGAGTACT
CTACATACACCCGCAGTTGCAAGGAAGACATTGTAGGCGGTCGTGCGAAT
GAGCCATGGAAAAAATCACAACGAAGTGGGGCAACGCCATGCTGAAAAGA
GTGCGTGACGAGCTGGAGAACAACAGGATACCCGAACCGGACCCGGAACC
GGACCTTGGCTGCGCTGGTGGCGATGCTTGCCAGTGCTATACAGTGGAAG
AAGTGGAGGAAATACTGAAGAGGGATGGGTCAGTTACGCCTGTATCCGGA
ACATTGGGCTTGTTACCGGTCAAGGATCATTGCATGCCGATACTGTGGAA
GCACACATGCGTGCTTTTACTGCCTGCGTATTACAACTTCCAGTTTGAAG
GCAGAGTACTCTACATACACCCGCAGTTGCAAGGAAGACATTGTAGGCGG
TCGTGCGAATGA back to top
|