prot_S-dermatodea_contig8748.16891.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8748.16891.1
Unique Nameprot_S-dermatodea_contig8748.16891.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length164
Homology
BLAST of mRNA_S-dermatodea_contig8748.16891.1 vs. uniprot
Match: D7FNQ2_ECTSI (Guanylate-binding protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ2_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 2.280e-24
Identity = 74/156 (47.44%), Postives = 93/156 (59.62%), Query Frame = 0
Query:   20 ASMKSRTLLRWEQVKPD--ADG---DGGD--ARVELTVDEDTLNMLSHINTKIAVVSIAGPYQTGKSYFLNQFANHVQGTAAAPDGDKSPDGGEGDSERQLDVPFSVSPSVI-----GDTGEVTVHVILACMNPLPESPDTTLLLLDTPGLLKPDR 163
            A+  S TL +W++V  +  ADG   +GG+   R+ELTVDE  L  LS I+TK+AVVSIAGPY++GKSYFLN  ANHV      P   K P  G  D ER    PF  SP++      G+ G     ++ AC  PLP+   T LLLLDTPGL+ P R
Sbjct:   43 AAPSSGTLFQWKRVPVEVAADGVGPEGGEESTRMELTVDEGALQALSQIDTKLAVVSIAGPYRSGKSYFLNFLANHVLANGFDPP--KEP--GSFDFER----PFPTSPTLNAEGGGGEAGLCRFQLVPACGKPLPDQEGTALLLLDTPGLMTPRR 190          
BLAST of mRNA_S-dermatodea_contig8748.16891.1 vs. uniprot
Match: A0A6H5L2D9_9PHAE (GBP domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2D9_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.810e-20
Identity = 65/159 (40.88%), Postives = 83/159 (52.20%), Query Frame = 0
Query:   20 ASMKSRTLLRWEQVKPDADGDG-------GDARVELTVDEDTLNMLSHINTKIAVVSIAGPYQTGKSYFLNQFANHVQGTAAAPDGDKSPDGGEGDSERQLDVPFSVSPSV--------IGDTGEVTVHVILACMNPLPESPDTTLLLLDTPGLLKPDR 163
            A+  S TL +W +V  +A  +G          R+ LT DE  L  LS I++K+AVVSIAGPY++GKSYFLN  ANHV      P  D     G  D ER     F  SP++          + G     ++ AC  PLP+   T LLLLDTPGL+ P R
Sbjct:   43 AASSSGTLFQWNRVPIEAAAEGVGPEGGKEGTRMALTADEGALEALSQIDSKLAVVSIAGPYRSGKSYFLNFLANHVLANGFDPPKDP----GSFDFERM----FPTSPTLNTEGGXXXXXEAGLCRFQLVPACAKPLPDQEGTALLLLDTPGLMTPRR 193          
BLAST of mRNA_S-dermatodea_contig8748.16891.1 vs. uniprot
Match: L1IUW4_GUITC (GB1/RHD3-type G domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IUW4_GUITC)

HSP 1 Score: 59.3 bits (142), Expect = 2.890e-7
Identity = 45/138 (32.61%), Postives = 64/138 (46.38%), Query Frame = 0
Query:   27 LLRWEQVKPDADGDGGDARV-ELTVDEDTLNMLSHINTKIAVVSIAGPYQTGKSYFLNQFANHVQGTAAAPDGDKSPDGGEGDSERQLDVPFSVSPSVIGDTGEVTVHVILACMNPLPESPDTTLLLLDTPGLLKPDR 163
            LLRW  + PD       +RV  +    +TLN+LS +  ++ VVSI GPY+TGKS+ LNQ   H  G                         F V  ++  +T EVT+ +I  C +   +      + LDTPGL  P+R
Sbjct:   24 LLRW-NLGPDK------SRVLRIQSVNETLNVLSELEGEVVVVSIVGPYRTGKSFLLNQLVPHEPGNLT----------------------FKVGDTIKPETEEVTLVIIPPCAS---QGRYRHHVFLDTPGLFAPNR 129          
BLAST of mRNA_S-dermatodea_contig8748.16891.1 vs. uniprot
Match: UPI000854251D (guanylate-binding protein 3-like n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854251D)

HSP 1 Score: 55.8 bits (133), Expect = 1.750e-6
Identity = 39/117 (33.33%), Postives = 57/117 (48.72%), Query Frame = 0
Query:   47 ELTVDEDTLNMLSHINTKIAVVSIAGPYQTGKSYFLNQFANHVQGTAAAPDGDKSPDGGEGDSERQLDVPFSVSPSVIGDTGEVTVHVILACMNPLPESPDTTLLLLDTPGLLKPDR 163
            +L V+E+   +LS I+  + VVSI GPY++GKSY +N+ +    G                         FSV P++  +T  + +     CM P PE    TL+LLDT GL  PD+
Sbjct:   21 KLAVNEEAKTILSKISQPLVVVSIVGPYRSGKSYLINKLSGQPGGV------------------------FSVDPTIKANTKGIWMW----CM-PHPEKHGHTLVLLDTEGLGDPDK 108          
BLAST of mRNA_S-dermatodea_contig8748.16891.1 vs. uniprot
Match: A0A2G9QGK1_LITCT (GB1/RHD3-type G domain-containing protein (Fragment) n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9QGK1_LITCT)

HSP 1 Score: 50.8 bits (120), Expect = 5.330e-5
Identity = 38/116 (32.76%), Postives = 54/116 (46.55%), Query Frame = 0
Query:   48 LTVDEDTLNMLSHINTKIAVVSIAGPYQTGKSYFLNQFANHVQGTAAAPDGDKSPDGGEGDSERQLDVPFSVSPSVIGDTGEVTVHVILACMNPLPESPDTTLLLLDTPGLLKPDR 163
            L V+E+   +L+ I   + VVSI GPY+TGKSY LN+ +   +G                         FSV  ++   T  + +     CM P P+  D TL+LLDT GL  P +
Sbjct:   22 LGVNENAQTILAQITQPLVVVSIVGPYRTGKSYLLNKLSGRQKGV------------------------FSVDSTIKATTKGIWMW----CM-PHPKKCDHTLVLLDTEGLGDPGK 108          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8748.16891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FNQ2_ECTSI2.280e-2447.44Guanylate-binding protein, putative n=1 Tax=Ectoca... [more]
A0A6H5L2D9_9PHAE1.810e-2040.88GBP domain-containing protein (Fragment) n=1 Tax=E... [more]
L1IUW4_GUITC2.890e-732.61GB1/RHD3-type G domain-containing protein n=1 Tax=... [more]
UPI000854251D1.750e-633.33guanylate-binding protein 3-like n=1 Tax=Nanorana ... [more]
A0A2G9QGK1_LITCT5.330e-532.76GB1/RHD3-type G domain-containing protein (Fragmen... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 40..163
e-value: 1.2E-18
score: 69.2
NoneNo IPR availablePANTHERPTHR10751GUANYLATE BINDING PROTEINcoord: 44..157
IPR015894Guanylate-binding protein, N-terminalPFAMPF02263GBPcoord: 47..159
e-value: 1.4E-13
score: 50.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 49..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8748contigS-dermatodea_contig8748:4455..6981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8748.16891.1mRNA_S-dermatodea_contig8748.16891.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8748 4455..6981 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8748.16891.1 ID=prot_S-dermatodea_contig8748.16891.1|Name=mRNA_S-dermatodea_contig8748.16891.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=164bp
AAEDPAADPKPAESPSCDQASMKSRTLLRWEQVKPDADGDGGDARVELTV
DEDTLNMLSHINTKIAVVSIAGPYQTGKSYFLNQFANHVQGTAAAPDGDK
SPDGGEGDSERQLDVPFSVSPSVIGDTGEVTVHVILACMNPLPESPDTTL
LLLDTPGLLKPDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015894Guanylate-bd_N
IPR027417P-loop_NTPase