prot_S-dermatodea_contig8743.16890.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8743.16890.1
Unique Nameprot_S-dermatodea_contig8743.16890.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length93
Homology
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BLAST of mRNA_S-dermatodea_contig8743.16890.1 vs. uniprot
Match: A0A6H5KWW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWW8_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 4.400e-43
Identity = 77/92 (83.70%), Postives = 81/92 (88.04%), Query Frame = 0 
Query:    1 MDGFTVGHLGDGCVAAFALTSALGQSEVPLTIAASEFVGVLSRGGGVFEALVAVLLPVVPFLPRAAADLVFYSVARAALDRALDEGVIKPFP 92
            MDGFTVGHLGDGCVAAFALTSALGQSE PLT+AA EFVGVL RGGG+ EAL AVLLP  PFLPRAAADL  Y+ AR A+DRALDEGVIKPFP
Sbjct:  259 MDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVGVLGRGGGILEALAAVLLPAAPFLPRAAADLFLYTAARLAIDRALDEGVIKPFP 350
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BLAST of mRNA_S-dermatodea_contig8743.16890.1 vs. uniprot
Match: D8LP08_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP08_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 3.110e-30
Identity = 61/73 (83.56%), Postives = 63/73 (86.30%), Query Frame = 0 
Query:    1 MDGFTVGHLGDGCVAAFALTSALGQSEVPLTIAASEFVGVLSRGGGVFEALVAVLLPVVPFLPRAAADLVFYS 73
            MDGFTVGHLGDGCVAAFALTSALGQSE PLT+AA EFV VL RGGG+ EAL AVLLP  PFLPRAAADL  YS
Sbjct:  167 MDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVRVLWRGGGILEALAAVLLPAAPFLPRAAADLFLYS 239
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8743.16890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWW8_9PHAE4.400e-4383.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP08_ECTSI3.110e-3083.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8743contigS-dermatodea_contig8743:7124..7402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8743.16890.1mRNA_S-dermatodea_contig8743.16890.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8743 4713..8385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8743.16890.1 ID=prot_S-dermatodea_contig8743.16890.1|Name=mRNA_S-dermatodea_contig8743.16890.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=93bp
MDGFTVGHLGDGCVAAFALTSALGQSEVPLTIAASEFVGVLSRGGGVFEA
LVAVLLPVVPFLPRAAADLVFYSVARAALDRALDEGVIKPFP*
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