prot_S-dermatodea_contig8742.16886.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8742.16886.1
Unique Nameprot_S-dermatodea_contig8742.16886.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length472
Homology
BLAST of mRNA_S-dermatodea_contig8742.16886.1 vs. uniprot
Match: D8LGY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY1_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 4.390e-166
Identity = 260/394 (65.99%), Postives = 302/394 (76.65%), Query Frame = 0
Query:   91 RTAAAEPNTLQSFKRNLGTGVLLRPRQDKAYRETR-QKTRQSAQQARSRAHAPRTQGLPGH---LWKVWRGLMALEGWCEASWGGRACAHVVAGALASSHSLVGSIVVGLAVWVSCAKRLGENACGKDGWKQVARITAEVAVLWYCHAMPHGLGAGRPLRGNFGSGKAGDLLGAIWHFLGQGAFIRLVAASGRLVGINVLEANGLLLGISCFGNEIAGSRMRHVVKGSAA----------EVCTYQLRGFFSRTDGIFGEKLILSLPFDVADTFLALQGILSATEREVVRKNGVLATAFREFASQPANTLDAHSLGALGARNLMGMGFVRARVRMFGRPALSLGWTEKASNMCLVGDPICGSLLQKILDPTCVMLKGRGHIYEAYIAGVSCLTN 470
            R A A+     +  R  G G   R R+D A   +   +TR+  +  R++A   R++    H        R L+A  GWCEA+  G+A  HVVAGALASSHS+V   VVGLAVW SCAKRL      +D WKQVARIT EVA++WYCHA+PHGLGAGRPLRGNFG+GKAGDLLGA+WHFLGQG FIRLVAASGR+V +NVLEANG+LLG+S  GN +AGSRMR VV  +A           E   YQLRGFFSRT+GIFGE+ ILS+PFD ADT LALQGILSATEREVV+KNGVLA+AFR+FA+Q ANTLDAHSLGA+GARNLMGMGF+ ARVRMFGRPALSLGWTEKA+NMC+ GDPICGSLLQK+LDPTCVMLKGRGH Y+AY+A V+CL N
Sbjct:  179 RAATADRIPPTTASRRFGPGACARRRRDVAAGASPPSRTRRPGRIGRAKARLKRSRRSGAHGLVSTGACRSLVAPGGWCEATSVGKATVHVVAGALASSHSVVAGFVVGLAVWASCAKRL---TGAEDDWKQVARITIEVAIMWYCHALPHGLGAGRPLRGNFGTGKAGDLLGAMWHFLGQGTFIRLVAASGRVVSLNVLEANGILLGLSHLGNGLAGSRMRRVVGATAXXXXXXXXXXXEAHAYQLRGFFSRTNGIFGERPILSMPFDTADTLLALQGILSATEREVVQKNGVLASAFRDFAAQSANTLDAHSLGAVGARNLMGMGFIAARVRMFGRPALSLGWTEKATNMCMEGDPICGSLLQKLLDPTCVMLKGRGHFYDAYVACVACLAN 569          
BLAST of mRNA_S-dermatodea_contig8742.16886.1 vs. uniprot
Match: A0A835ZF00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF00_9STRA)

HSP 1 Score: 274 bits (700), Expect = 2.220e-80
Identity = 153/316 (48.42%), Postives = 193/316 (61.08%), Query Frame = 0
Query:  155 WRGLMALEGWCEASWGGRACAHVVAGALASSHSLVGSIVVGLAVWVSCAKRLGENACGKDGWKQVARITAEVAVLWYCHAMPHGLGAGRPLRGNFGSGKAGDLLGAIWHFLGQGAFIRLVAASGRLVGINVLEANGLLLGISCFGNEIAGSRMRHV-VKGSAAEVCTYQLRGFFSRTDGIFGEKLILSLPFDVADTFLALQGILSATEREVVRKNGVLATAFREFASQPANTLDAHSLGALGARNLMGMGFVRARVRMFGRPALSLGWTEKASNMCLVGDPICGSLLQKILDPTCVMLKGRGHIYEAYIAGVSCLT 469
            W      E    ++W  R  + V+   LAS+  L+ S+VVG AV VSCA      A G+  W+Q AR+T EVA+L Y H +P GLG    LR +  + +   L GA  H+ GQ      VAA+ R V +N+ EAN LLLG S  GN  AGSR+  + + G + +   YQLRGFF RT G+F  + +LSLPFD  DT L  QGILSATERE+      +  AFR +A  P + LDAHSLG LGARNL GMG V A VR+F RP +SLGWT   S++C+VGDPICGS L K+LDPTC +L G GHIY  Y+   +  T
Sbjct:  450 WSDYWFAEQLLRSAWPVRIVSDVLLSTLASASPLLASVVVGAAVCVSCA------AAGEH-WQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRLWCLDLGGGSDDAVGYQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKYLTSWAAAT 758          
BLAST of mRNA_S-dermatodea_contig8742.16886.1 vs. uniprot
Match: A0A7S1XTN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTN3_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.220e-16
Identity = 62/151 (41.06%), Postives = 76/151 (50.33%), Query Frame = 0
Query:  292 LLGISCFGNEIAGSRMRHVVKGSAAEVCTYQLRGFFSRTDGIFGEKL--------------ILSLPFDVADTFLALQGILSATEREVVRKNGVLATAFREFASQPANTLDAHSLGALGARNLMGMGFV---RARVRMFGRPALSLGWTEKA 425
            LL  S  GN   G R+R    G       ++LRGFF R  GI  E                +LSLPFDVAD  L LQGILSATE +V+R    LA   R    + A  + AHSLGALGARNL   G +     R+ +  +P +S+GW   A
Sbjct:    2 LLATSFVGNLCVGGRLRRDATGEH-----FELRGFFCRLRGICDEAFWAPVLGPASTCIAAVLSLPFDVADLLLNLQGILSATELDVLRGGSQLARDLRAGGGEEAVHVYAHSLGALGARNLATAGALAGENVRLWLLAQPWISVGWLAAA 147          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8742.16886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LGY1_ECTSI4.390e-16665.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZF00_9STRA2.220e-8048.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XTN3_9STRA1.220e-1641.06Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8742contigS-dermatodea_contig8742:3018..8047 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8742.16886.1mRNA_S-dermatodea_contig8742.16886.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8742 2700..8156 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8742.16886.1 ID=prot_S-dermatodea_contig8742.16886.1|Name=mRNA_S-dermatodea_contig8742.16886.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=472bp
MMLQGLAIIPQRKNTAGLCSGLPSAQRKARRRQTKELRVVRGAAPPPPCD
RTNISATAPSSAFWVWPRSPHAPKSATTTATVVAVARRGGRTAAAEPNTL
QSFKRNLGTGVLLRPRQDKAYRETRQKTRQSAQQARSRAHAPRTQGLPGH
LWKVWRGLMALEGWCEASWGGRACAHVVAGALASSHSLVGSIVVGLAVWV
SCAKRLGENACGKDGWKQVARITAEVAVLWYCHAMPHGLGAGRPLRGNFG
SGKAGDLLGAIWHFLGQGAFIRLVAASGRLVGINVLEANGLLLGISCFGN
EIAGSRMRHVVKGSAAEVCTYQLRGFFSRTDGIFGEKLILSLPFDVADTF
LALQGILSATEREVVRKNGVLATAFREFASQPANTLDAHSLGALGARNLM
GMGFVRARVRMFGRPALSLGWTEKASNMCLVGDPICGSLLQKILDPTCVM
LKGRGHIYEAYIAGVSCLTNR*
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