prot_S-dermatodea_contig8740.16885.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8740.16885.1
Unique Nameprot_S-dermatodea_contig8740.16885.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length242
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8740.16885.1 vs. uniprot
Match: D7G3I4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I4_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 2.540e-60
Identity = 132/225 (58.67%), Postives = 153/225 (68.00%), Query Frame = 0 
Query:   12 FGGLVSA-STNGGVSRLSSGQLETMPQAQDLA-------AGQEANDAS---SFFPTAAQVPPEPATPVRYTSFSSPTPTSLRALDLKKIHLDEALNVTSHRRGNVKDIASGFRGESRPENVEVFQKRHAQQEAAYRHTVHEGKETLKKTSQGTDAMYNFVLKLNLATTEGKERFMRRWAVGRIANGESTTPREGWKFLQSLGIDVESKKPRQAPLSSATTNPVSP 225
             GGLVSA +++GG   L S  LE   +  +         AG+E    S        +   P   AT   Y+ FSS +   +RA DLKK HLDEA N+TS+R   VKDIASGF+GESRPENVEVF KRH +QEA YRH VH+GKETLKKTSQGTDAMYNFVLKLNLATTEGKERFM++WA+GRIANGES  PREGWKFL+SLGIDV   KPR    ++    P SP
Sbjct:  118 LGGLVSAFASDGGGRSLESVALEAQGELSEEEIPAIREEAGEEPQSLSPPPKLSERSLSQPNPEAT--NYSVFSSTS--DVRARDLKKTHLDEARNLTSNRARKVKDIASGFKGESRPENVEVFHKRHKEQEADYRHKVHQGKETLKKTSQGTDAMYNFVLKLNLATTEGKERFMKKWAIGRIANGESINPREGWKFLKSLGIDVP--KPRSPNAATDFARPGSP 336
[Close]
BLAST of mRNA_S-dermatodea_contig8740.16885.1 vs. uniprot
Match: A0A6H5KR12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR12_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 2.750e-54
Identity = 113/189 (59.79%), Postives = 128/189 (67.72%), Query Frame = 0 
Query:   70 YTSFSSPTPTSLRALDLKKIHLDEALNVTSHRRGNVKDIASGFRGESR---------------------------------PENVEVFQKRHAQQEAAYRHTVHEGKETLKKTSQGTDAMYNFVLKLNLATTEGKERFMRRWAVGRIANGESTTPREGWKFLQSLGIDVESKKPRQAPLSSATTNPVSP 225
            Y+ FSS +   +RA DLKK HLDEA N+TS+R   VKDIASGF+GESR                                 PENVEVF KRH +QEA YRH VH+GKETLKKTSQGTDAMYNFVLKLNLATTEGKERFM++WA+GRIANGES  PREGWKFL+SLGIDV   KPR    ++   +P SP
Sbjct:  226 YSVFSSNS--DVRARDLKKTHLDEARNLTSNRARKVKDIASGFKGESRQATAVNTSTAGCHTSEPRTPVPDPGRNQLLFSEPENVEVFHKRHKEQEADYRHKVHQGKETLKKTSQGTDAMYNFVLKLNLATTEGKERFMKKWAIGRIANGESINPREGWKFLKSLGIDVP--KPRSPNAAADFASPGSP 410
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8740.16885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3I4_ECTSI2.540e-6058.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR12_9PHAE2.750e-5459.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8740contigS-dermatodea_contig8740:280..7810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8740.16885.1mRNA_S-dermatodea_contig8740.16885.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8740 280..7830 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8740.16885.1 ID=prot_S-dermatodea_contig8740.16885.1|Name=mRNA_S-dermatodea_contig8740.16885.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=242bp
MHKRSSSRGGAFGGLVSASTNGGVSRLSSGQLETMPQAQDLAAGQEANDA
SSFFPTAAQVPPEPATPVRYTSFSSPTPTSLRALDLKKIHLDEALNVTSH
RRGNVKDIASGFRGESRPENVEVFQKRHAQQEAAYRHTVHEGKETLKKTS
QGTDAMYNFVLKLNLATTEGKERFMRRWAVGRIANGESTTPREGWKFLQS
LGIDVESKKPRQAPLSSATTNPVSPESAAETAPARGRGRTKE
back to top