prot_S-dermatodea_contig12762.1688.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12762.1688.1
Unique Nameprot_S-dermatodea_contig12762.1688.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length123
Homology
BLAST of mRNA_S-dermatodea_contig12762.1688.1 vs. uniprot
Match: A0A6H5KA14_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 2.060e-34
Identity = 62/92 (67.39%), Postives = 75/92 (81.52%), Query Frame = 0
Query:   32 MFISFTIHFVDAGLLREIDLACEPFNLSHAGVNVAKKLKTILIAKGLDPKKCTGITIDNASNMVKAREILAADDDNLILTVPCFCHSLQLTV 123
            MFISFTIHFVD   LR IDLAC PFN++H+G N+AK+LK+IL   GLDPKKCTGIT+DNASNM++A   L A DDN IL + CFCHS+QL++
Sbjct:    1 MFISFTIHFVDGETLRTIDLACRPFNVTHSGENIAKELKSILTDAGLDPKKCTGITMDNASNMIRAGNQLDASDDNNILRLSCFCHSIQLSI 92          
BLAST of mRNA_S-dermatodea_contig12762.1688.1 vs. uniprot
Match: A0A6P4JJ81_DROKI (zinc finger BED domain-containing protein 1-like n=1 Tax=Drosophila kikkawai TaxID=30033 RepID=A0A6P4JJ81_DROKI)

HSP 1 Score: 61.6 bits (148), Expect = 1.390e-8
Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 0
Query:   12 LVDDKYFGGSTDIWTGTNRGMFISFTIHFVDAGL-LREIDLACEPF--NLSHAGVNVAKKLKTILIAKGLDPKKCTGITIDNASNMVKAREILAADDDNLILTVPCFCHSLQLTV 123
            L D K+   ++D WT      +++ T HF+ A   LR   L+ E      SH+  ++A  ++T+L    L   K T +  DNA NM+KA EIL       I  +PCF HS+ LTV
Sbjct:  170 LQDVKHCAITSDCWTSRANECYVTVTCHFITADFELRNAVLSTEKLLDERSHSSESIANSIRTVLEEWSL-LGKVTAMVTDNAKNMIKACEILQ------IRHIPCFAHSINLTV 277          
BLAST of mRNA_S-dermatodea_contig12762.1688.1 vs. uniprot
Match: UPI001955A70F (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955A70F)

HSP 1 Score: 53.5 bits (127), Expect = 8.940e-6
Identity = 32/113 (28.32%), Postives = 53/113 (46.90%), Query Frame = 0
Query:    9 TLKLVDDKYFGGSTDIWTGTNRGMFISFTIHFVDAGLLREIDLACEPFNLSHAGVNVAKKLKTILIAKGLDPKKCTGITIDNASNMVKAREILAADDDNLILTVPCFCHSLQL 121
            TL L        + D WT  ++  +++ T H++D  +L    L       SH G N+   L   L   GL  K    +T +NA+NM++A E++       +L + CF H++ L
Sbjct:   34 TLSLTTADRVALTCDGWTSRHQDTYVTITCHYLDDWVLISNVLQTRAMQDSHTGANICALLSDALEEWGLTKKDPIIVTNNNATNMIRAVEMME------LLHIGCFAHTINL 140          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12762.1688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KA14_9PHAE2.060e-3467.39Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6P4JJ81_DROKI1.390e-835.65zinc finger BED domain-containing protein 1-like n... [more]
UPI001955A70F8.940e-628.32E3 SUMO-protein ligase ZBED1-like n=1 Tax=Pimephal... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169:SF1coord: 12..122
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 12..122
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 11..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12762contigS-dermatodea_contig12762:6455..6823 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12762.1688.1mRNA_S-dermatodea_contig12762.1688.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12762 6455..6823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12762.1688.1 ID=prot_S-dermatodea_contig12762.1688.1|Name=mRNA_S-dermatodea_contig12762.1688.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=123bp
QQIAARAATLKLVDDKYFGGSTDIWTGTNRGMFISFTIHFVDAGLLREID
LACEPFNLSHAGVNVAKKLKTILIAKGLDPKKCTGITIDNASNMVKAREI
LAADDDNLILTVPCFCHSLQLTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf