prot_S-dermatodea_contig87361.16879.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig87361.16879.1
Unique Nameprot_S-dermatodea_contig87361.16879.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length105
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig87361.16879.1 vs. uniprot
Match: A0A7S6UA35_9STRA (50S ribosomal protein L21, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA35_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.920e-68
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 
Query:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTIES 104
            MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTIES
Sbjct:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTIES 104
[Close]
BLAST of mRNA_S-dermatodea_contig87361.16879.1 vs. uniprot
Match: A0A0R6M4T4_UNDPI (50S ribosomal protein L21, chloroplastic n=25 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M4T4_UNDPI)

HSP 1 Score: 149 bits (376), Expect = 8.660e-45
Identity = 68/103 (66.02%), Postives = 87/103 (84.47%), Query Frame = 0 
Query:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTIE 103
            M+YAIIEASGRQ+W+EPK FI  NR+ +K GST+ IRR+LFVK++++  IGQPYLN   +K  V KHFLGPK++VFKMKPKKKY++K GHRQ+L+RL+IN IE
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTILIRRVLFVKQKKNTLIGQPYLNNVVVKGVVSKHFLGPKILVFKMKPKKKYRKKIGHRQKLTRLLINKIE 103
[Close]
BLAST of mRNA_S-dermatodea_contig87361.16879.1 vs. uniprot
Match: A0A2R4QQ35_9PHAE (50S ribosomal protein L21 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ35_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 9.490e-45
Identity = 67/103 (65.05%), Postives = 85/103 (82.52%), Query Frame = 0 
Query:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTIE 103
            M+YAIIEASGRQ+W+EPK FI  NR+P+K GST+ I+R+LFVKK+   FIGQPYL    +   + KHFLGPK++VFKMKPKKKY++K GHRQ+L+RL+IN IE
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKKADTFIGQPYLKNILLTGIISKHFLGPKVLVFKMKPKKKYRKKIGHRQKLTRLLINQIE 103
[Close]
BLAST of mRNA_S-dermatodea_contig87361.16879.1 vs. uniprot
Match: A0A141BSP2_9PHAE (50S ribosomal protein L21, chloroplastic n=14 Tax=Sargassum TaxID=3015 RepID=A0A141BSP2_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.520e-43
Identity = 65/103 (63.11%), Postives = 87/103 (84.47%), Query Frame = 0 
Query:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTIE 103
            M+YAIIEASGRQ+W+EP  FI +NR+P++ GST+ I+RILFVKK+ + FIGQPYL    +K  + KHFLG K++VFKMKPKKKY++K GHRQ+L+RL+I++IE
Sbjct:    1 MEYAIIEASGRQFWVEPNKFIELNRLPLRIGSTILIKRILFVKKKTNTFIGQPYLTNIVLKGIISKHFLGSKILVFKMKPKKKYRKKMGHRQKLTRLLISSIE 103
[Close]
BLAST of mRNA_S-dermatodea_contig87361.16879.1 vs. uniprot
Match: A0A8F0F7S8_9PHAE (Ribosomal protein L21 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7S8_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.890e-43
Identity = 67/102 (65.69%), Postives = 83/102 (81.37%), Query Frame = 0 
Query:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTI 102
            M+YAIIEASGRQ+W+EPK FI  N + IK GST+ IRR+LF K E + FIGQPYLN   +K  + KHFLGPK++VFKMKPKKKY++K GHRQ+L+RL+IN I
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNXLIIKIGSTILIRRVLFFKNETNTFIGQPYLNDVVVKGIISKHFLGPKVLVFKMKPKKKYRKKIGHRQKLTRLLINQI 102
[Close]
BLAST of mRNA_S-dermatodea_contig87361.16879.1 vs. uniprot
Match: A0A8F0JZ48_9PHAE (Ribosomal protein L21 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZ48_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 5.840e-43
Identity = 66/102 (64.71%), Postives = 84/102 (82.35%), Query Frame = 0 
Query:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTI 102
            M+YAIIEASGRQ+W+EPK FI  NR+ +K GST+ IRR+LFVKKE +  IG+PYL    +K  + KHFLGPK++VFKMKPKKKY++K GHRQ+L+RL+IN I
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTVLIRRVLFVKKEANTLIGRPYLEGIVLKGIISKHFLGPKIIVFKMKPKKKYRKKIGHRQKLTRLLINKI 102
[Close]
BLAST of mRNA_S-dermatodea_contig87361.16879.1 vs. uniprot
Match: B7T239_VAULI (50S ribosomal protein L21, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T239_VAULI)

HSP 1 Score: 144 bits (362), Expect = 1.210e-42
Identity = 65/102 (63.73%), Postives = 84/102 (82.35%), Query Frame = 0 
Query:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTI 102
            M Y IIEAS RQYWIEP   I+IN +PIK+GST+ + +ILF + ++ IFIG+PYLN+  +KAT+ KHFLGPK++V+KMKPKKKYKRK+GHRQ L+RL+I  I
Sbjct:    1 MIYGIIEASSRQYWIEPGKIIDINNLPIKSGSTILLNQILFARNQDQIFIGRPYLNKITVKATIEKHFLGPKIIVYKMKPKKKYKRKNGHRQHLTRLMIQKI 102
[Close]
BLAST of mRNA_S-dermatodea_contig87361.16879.1 vs. uniprot
Match: A0A1I9LVJ3_9PHAE (50S ribosomal protein L21, chloroplastic n=10 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVJ3_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.370e-41
Identity = 64/103 (62.14%), Postives = 83/103 (80.58%), Query Frame = 0 
Query:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTIE 103
            M+YAIIEASGRQ+W+EPK FI  NR+ +K GST+ IRRILF K + +  IGQPYL    +K  + KHFLGPK++VFKMKPKKKY++K GHRQ+++RL+I+ IE
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTILIRRILFAKNKTTTHIGQPYLKNILVKGKISKHFLGPKILVFKMKPKKKYRKKIGHRQKMTRLLIHKIE 103
[Close]
BLAST of mRNA_S-dermatodea_contig87361.16879.1 vs. uniprot
Match: A0A8F0JYD6_9PHAE (Ribosomal protein L21 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYD6_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 3.930e-41
Identity = 67/103 (65.05%), Postives = 82/103 (79.61%), Query Frame = 0 
Query:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTIE 103
            M+YA+IEASGRQ+W+EPK FI  NR+ I  GSTL ++RILF+ K  +I IGQPYL    IK  + KHFLGPK++VFKMKPKKKY+RK GHRQ+L+RL IN IE
Sbjct:    1 MEYAVIEASGRQFWVEPKKFIEFNRLLINIGSTLIMQRILFMNKTGAINIGQPYLPNTLIKGIISKHFLGPKILVFKMKPKKKYRRKIGHRQKLTRLFINQIE 103
[Close]
BLAST of mRNA_S-dermatodea_contig87361.16879.1 vs. uniprot
Match: A0A8E5XRL0_9PHAE (50S ribosomal protein L21, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRL0_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.700e-40
Identity = 61/103 (59.22%), Postives = 83/103 (80.58%), Query Frame = 0 
Query:    1 MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFIGQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVINTIE 103
            M YAIIEASGRQ+W+EP+ F+ +NR+P+  G+ + I+R+LF K  E   IGQPY+N  +IK  V KHFLGPKL+VFKMKPKKKY+++ GHRQ+L+RL+I+ I+
Sbjct:    1 MKYAIIEASGRQFWVEPEKFVELNRLPVNIGTKILIKRVLFAKTGEKTRIGQPYINHIEIKGVVSKHFLGPKLLVFKMKPKKKYRKRIGHRQKLTRLLISQIK 103
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig87361.16879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6UA35_9STRA2.920e-68100.0050S ribosomal protein L21, chloroplastic n=1 Tax=S... [more]
A0A0R6M4T4_UNDPI8.660e-4566.0250S ribosomal protein L21, chloroplastic n=25 Tax=... [more]
A0A2R4QQ35_9PHAE9.490e-4565.0550S ribosomal protein L21 n=3 Tax=Fucaceae TaxID=3... [more]
A0A141BSP2_9PHAE1.520e-4363.1150S ribosomal protein L21, chloroplastic n=14 Tax=... [more]
A0A8F0F7S8_9PHAE2.890e-4365.69Ribosomal protein L21 n=2 Tax=Laminariales TaxID=2... [more]
A0A8F0JZ48_9PHAE5.840e-4364.71Ribosomal protein L21 n=1 Tax=Chorda asiatica TaxI... [more]
B7T239_VAULI1.210e-4263.7350S ribosomal protein L21, chloroplastic n=1 Tax=V... [more]
A0A1I9LVJ3_9PHAE1.370e-4162.1450S ribosomal protein L21, chloroplastic n=10 Tax=... [more]
A0A8F0JYD6_9PHAE3.930e-4165.05Ribosomal protein L21 n=1 Tax=Protohalopteris sp. ... [more]
A0A8E5XRL0_9PHAE1.700e-4059.2250S ribosomal protein L21, chloroplastic n=1 Tax=I... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028909Ribosomal protein L21-likePFAMPF00829Ribosomal_L21pcoord: 3..102
e-value: 1.0E-31
score: 109.2
IPR028909Ribosomal protein L21-likePANTHERPTHR2134950S RIBOSOMAL PROTEIN L21coord: 2..103
IPR001787Ribosomal protein L21TIGRFAMTIGR00061TIGR00061coord: 3..102
e-value: 8.4E-28
score: 94.7
IPR001787Ribosomal protein L21HAMAPMF_01363Ribosomal_L21coord: 2..104
score: 22.022
NoneNo IPR availablePANTHERPTHR21349:SF350S RIBOSOMAL PROTEIN L21coord: 2..103
IPR018258Ribosomal protein L21, conserved sitePROSITEPS01169RIBOSOMAL_L21coord: 73..95
IPR036164L21-like superfamilySUPERFAMILY141091L21p-likecoord: 3..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig87361contigS-dermatodea_contig87361:215..529 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig87361.16879.1mRNA_S-dermatodea_contig87361.16879.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig87361 215..529 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig87361.16879.1 ID=prot_S-dermatodea_contig87361.16879.1|Name=mRNA_S-dermatodea_contig87361.16879.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=105bp
MDYAIIEASGRQYWIEPKNFININRIPIKTGSTLEIRRILFVKKEESIFI
GQPYLNQFKIKATVGKHFLGPKLVVFKMKPKKKYKRKSGHRQQLSRLVIN
TIES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028909L21p-like
IPR001787Ribosomal_L21
IPR018258Ribosomal_L21_CS
IPR036164L21-like_sf