mRNA_S-dermatodea_contig8735.16877.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8735.16877.1 vs. uniprot
Match: D8LKX0_ECTSI (GpcrRhopsn4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX0_ECTSI) HSP 1 Score: 324 bits (831), Expect = 2.550e-102 Identity = 161/183 (87.98%), Postives = 175/183 (95.63%), Query Frame = 3
Query: 3 EVLHWGGQLVVSYVLVGLAYGWTLSSRAVQKYVPDDKNIVYLMAGSLGFVHLMFVILGRLSDDHHAKSHALDSAPAYFLVLVRLVLLAIFLLGAVKTFEAEASAQRRGFIARLVVLGTLWFAAMPVLVLVAMICAEYIQEPVVSVGGLLTQSLGLAVLSWLFLTRNEYYKMSSLAHTGMLPTN 551
EVLHWGGQL+VSYVLVGLAYGWTLSSRAVQKYVPDDK+IVYL+AG LGF+HLMFVILGR+SDDHHAKSH+LDSAPAYFLVLVRL LL +FLLGA+KTFEAE ++ RRGFI RLVVLG+LWFAAMPVLVLVAMICAEY+QEPVV+VG LL QSLGL+VLSWLFLTRNEYYKMSSLAHTGMLPTN
Sbjct: 244 EVLHWGGQLLVSYVLVGLAYGWTLSSRAVQKYVPDDKSIVYLLAGCLGFLHLMFVILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQNSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHTGMLPTN 426
BLAST of mRNA_S-dermatodea_contig8735.16877.1 vs. uniprot
Match: A0A7S4CD68_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CD68_9EUGL) HSP 1 Score: 109 bits (272), Expect = 7.100e-22 Identity = 68/196 (34.69%), Postives = 105/196 (53.57%), Query Frame = 3
Query: 3 EVLHWGGQLVVSYVLVGLAYGWTLSSR------AVQKYV----------PDDKNIVYLMAGSLGFVHLMFVILGRLSDDHHAKSHALDSAPAYFLVLVRLVLLAIFLLGAVKTFEAEASAQRRGFIARLVVLGTLWFAAMPVLVLVAMICAEYIQEPVVSVGGLLTQSLGLAVLSWLFLTRNEYYKMSSLAHTGML 542
++L +L++S+VL+ +A+GWTL++ A Q + P D +L+ S+ FV ++ ILGR +D + H + AP Y L+ +R+ L F LG + T A GF+ RL +LGT WF A PVLV+ Y + VV+ G + QS L + ++FL+R+EYYK+SSL+ G L
Sbjct: 248 DLLQGISELIISFVLICMAFGWTLTAPVSLIAGARQSGIMGGLAEIFGRPADLG-AFLVFASILFVQVILQILGRQYEDDFTQFHDYEHAPGYTLMAMRVFLCLAFWLGTMTTIRGSRDANVAGFLGRLTLLGTTWFLAFPVLVVCTAFLPPYNRHSVVTSGAITMQSFALCLFLYMFLSRSEYYKISSLSKMGTL 442
BLAST of mRNA_S-dermatodea_contig8735.16877.1 vs. uniprot
Match: S5CS41_EUGGR (G-protein-coupled-receptor n=1 Tax=Euglena gracilis TaxID=3039 RepID=S5CS41_EUGGR) HSP 1 Score: 96.3 bits (238), Expect = 1.620e-17 Identity = 61/192 (31.77%), Postives = 97/192 (50.52%), Query Frame = 3
Query: 3 EVLHWGGQLVVSYVLVGLAYGWTLSSRA---VQKYVPDDKNIVYLMAGSLGFVHLMFVI---------LGRLSDDHHAKSHALDSAPAYFLVLVRLVLLAIFLLGAVKTFEAEASAQRRGFIARLVVLGTLWFAAMPVLVLVAMICAEYIQEPVVSVGGLLTQSLGLAVLSWLFLTRNEYYKMSSLAHTGML 542
++L +L++S+VL+ +A+GWTLSS P ++ G + F I LGR +D + H + P Y L+ +R++ F +G + T + +A F+ RL +GT WF A P+LV+ A Y + VV+ G ++ QS LA+ LFL+ +EYYK+SSL+ G L
Sbjct: 260 DMLQGLSELLISFVLICMAFGWTLSSPMSLITGARSPGGLAAIFSQPADAGAALVFFSIFLLQTVLQYLGRQYEDDFTQFHDYEHNPGYGLLALRVLSCVAFWIGTMGTIRSSRNADVASFLGRLTFIGTAWFLAFPILVISTSFMAPYNRHAVVAGGSIVLQSAALALFLKLFLSHSEYYKISSLSKMGTL 451
BLAST of mRNA_S-dermatodea_contig8735.16877.1 vs. uniprot
Match: A0A7R9SVE3_9CHLO (Hypothetical protein n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SVE3_9CHLO) HSP 1 Score: 87.0 bits (214), Expect = 1.180e-14 Identity = 60/202 (29.70%), Postives = 105/202 (51.98%), Query Frame = 3
Query: 24 QLVVSYVLVGLAYGWTLSSRAVQKYVP----------DDKNIVYLMA--GSLGFVHLMFVILGRLSDDHHAKSHALDSAPAYFLVLVRLVLLAIFLLGAVKTFEAE----------------ASAQRRGFIARLVVLGTLWFAAMPVLVLVAMICAE-YIQEPVVSVGGLLTQSLGLAVLSWLFLTRNEYYKMSSLAHTGML 542
+L++ ++L+ LA+GWTL + + VP + + MA G++ ++ +LGR +D + H + P Y L+ +R+ L A+FL+G + T + A+ F+ +L+V+G++WF A PVLV+ A E Y + PVV+ G ++ QS+ L +S LFL + Y K+S+LA+ G +
Sbjct: 199 ELLIEFLLITLAFGWTLMPKG-EASVPLLGRFGLAMSSGSSWIIRMAFFGAIAMSQVVLAMLGRRYEDDFNQFHDFEHPPGYCLMALRVTLCALFLIGGLNTLKRSSGGNVASAGSGSTTPGAAVAVSSFMWKLLVMGSVWFLAFPVLVVCASPFFEPYNRHPVVTGGSIILQSVALGSISTLFLQNSSYLKLSTLANMGTI 399
BLAST of mRNA_S-dermatodea_contig8735.16877.1 vs. uniprot
Match: A0A813FXL4_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FXL4_POLGL) HSP 1 Score: 80.9 bits (198), Expect = 3.470e-12 Identity = 53/179 (29.61%), Postives = 97/179 (54.19%), Query Frame = 3
Query: 3 EVLHWGGQLVVSYVLVGLAYGWTLSSRAVQKYVPDDKNIVYLMAGSLGFVHLMFVILGRLSDDHHAKSHALDSAPAYFLVLVRLVLLAIFLLGAVKTFEAEASAQRRGFIARLVVLGTLWFAAMPVLVLVAMICAEYIQEPVVSVGGLLTQSLGLAVLSWLFLTRNEYYKMSSLAHTGM 539
E+L Q+ + +L+ + G+TL + + +++ M +G +H+M V G++ DD K H + + L+ +RL+L FL AV+ + ++ R F+ + + G+++F A P + L A + A Y+Q V+SVG +L Q L+ LFLTR EY+K+S+L+ + +
Sbjct: 922 EILFMLSQVTQTSLLILIGLGYTLLQSRI-----GELDLMIPMCFMVGVIHIMLVGFGKIKDDAAYKFHENEGPVGWILLTMRLLLYGWFL-WAVQASARDGGSKVRNFLDQFRIAGSIYFLAYPTIFLAAKMFAPYLQHGVMSVGLMLMQGGSNLWLASLFLTRGEYFKVSTLSSSDL 1094
BLAST of mRNA_S-dermatodea_contig8735.16877.1 vs. uniprot
Match: A0A0V0QHZ3_PSEPJ (GpcrRhopsn4 domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QHZ3_PSEPJ) HSP 1 Score: 77.8 bits (190), Expect = 1.140e-11 Identity = 47/175 (26.86%), Postives = 98/175 (56.00%), Query Frame = 3
Query: 30 VVSYVLVGLAYGWTLSSRAVQKYVPDDKNIVYLMAGSLGFVHLMFVILGRLSDDHHAKSHALDSAPAYFLVLVRLVLLAIFLLGAVKTFEAEASAQRRGFIARLVVLGTLWFAAMPVLVLVAMICAEYIQEPVVSVGGLLTQSLGLAVLSWLFLTRNEYYKMSSLAHTGMLPTNR 554
++S L+ +++GWT++ + D +++ +A +G + LM + LG+L+D+ +K H D Y ++++++ L F G + + +AS + + FI +L G+L+F A+P+L++++ A Y + ++++G LL Q+ VL +L ++ Y S+ G+LP R
Sbjct: 235 LLSVFLLLVSWGWTINYMEL-----DSFDVIVPLAILMGIIDLMIMGLGKLTDNSDSKYHLYDGWVGYVILVIQIGLFIYFQFG-LNNIKQKASIKLKSFIQQLSFFGSLYFLAIPILLVISWFFAFYDRNIIITLGTLLIQAAAFIVLIYLNTSQKSAYYKVSMKSQGILPGGR 403
BLAST of mRNA_S-dermatodea_contig8735.16877.1 vs. uniprot
Match: A0A7S1A1W1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A1W1_NOCSC) HSP 1 Score: 69.3 bits (168), Expect = 6.710e-9 Identity = 49/179 (27.37%), Postives = 96/179 (53.63%), Query Frame = 3
Query: 3 EVLHWGGQLVVSYVLVGLAYGWTLSSRAVQKYVPDDKNIVYLMAGSLGFVHLMFVILGRLSDDHHAKSHALDSAPAYFLVLVRLVLLAIFLLGAVKTFEAEASAQRRGFIARLVVLGTLWFAAMPVLVLVAMICAEYIQEPVVSVGGLLTQSLGLAVLSWLFLTRNEYYKMSSLAHTGM 539
E+L+ Q++ + +L+ ++ G+TLS + + +++ + +G +HLM V G+L D+ + H + + +++RL LL I+ AV E + R F+ + + G+++F P + L A + + Q +++VG L+T L+ LFLTR EY+K+SSL+ + +
Sbjct: 238 EMLYVISQVIQTSILLLISLGYTLSQSKI-----GELDLMIPVCFMIGVLHLMLVGFGKLKDEGSYRYHENEGIMGWLQLVLRL-LLYIWFSWAVGETSKEGGMKLRDFLVKFRIAGSVYFLITPTMFLFARQFSPHTQFFLMAVGTLVTNLASDVWLATLFLTRGEYFKVSSLSSSDL 410
BLAST of mRNA_S-dermatodea_contig8735.16877.1 vs. uniprot
Match: A0A7S3SL10_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SL10_9SPIT) HSP 1 Score: 63.2 bits (152), Expect = 9.770e-9 Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 3
Query: 288 KTFEAEASAQRRGFIARLVVLGTLWFAAMPVLVLVAMICAEYIQEPVVSVGGLLTQSLGLAVLSWLFLTRNEYYKMSSLAHTG 536
++ E + F+ RL V G WF +P+LVL+A + Y + +V+ G +L Q+ LA+LS LFL+ +E+YK+SSLAH G
Sbjct: 13 RSLRLERQPEIASFLRRLFVYGGSWFLCLPLLVLLAAVLPPYRRHQLVAGGSILLQTAALALLSRLFLSSSEFYKISSLAHLG 95
BLAST of mRNA_S-dermatodea_contig8735.16877.1 vs. uniprot
Match: A0A7S1RV62_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RV62_ALECA) HSP 1 Score: 68.6 bits (166), Expect = 1.240e-8 Identity = 49/176 (27.84%), Postives = 93/176 (52.84%), Query Frame = 3
Query: 3 EVLHWGGQLVVSYVLVGLAYGWTLSSRAVQKYVPDDKNIVYLMAGSLGFVHLMFVILGRLSDDHHAKSHALDSAPAYFLVLVRLVLLAIFLLGAVKTFEAEASAQRRGFI-ARLVVLGTLWFAAMPVLVLVAMICAEYIQEPVVSVGGLLTQSLGLAVLSWLFLTRNEYYKMSSLA 527
E+ Q++ + +L+ +A G+TL + + +++ + + +H+M V G+L DD H + + L+++RL LL ++ L AV++ +E + R F+ + +G+L+F + P + LV A Y+Q V++VG Q+ L FLTR EY+K+S+L+
Sbjct: 265 EIFFILSQVIQTSLLILIALGYTLLQSCI-----GELDLMIPVCFMVAVIHVMLVGFGKLKDDSAYAFHENEGILGWILLVLRL-LLYVWFLWAVQSSASEGGTRLRSFLLGQFRAVGSLYFLSYPAIFLVTKCFAPYLQHGVMTVGLEAMQAASSVWLCMNFLTRGEYFKVSTLS 434
BLAST of mRNA_S-dermatodea_contig8735.16877.1 vs. uniprot
Match: A0A7J6NEV4_PEROL (AAA domain-containing protein n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NEV4_PEROL) HSP 1 Score: 67.4 bits (163), Expect = 5.070e-8 Identity = 50/184 (27.17%), Postives = 99/184 (53.80%), Query Frame = 3
Query: 3 EVLHWGGQLVVSYVLVGLAYGWTLSSRAVQKYVPDDKNIVYLMAGSLGFVHLMFVILGRLSDDHHAKSHALDSAPAYFLVLVRLVLLAIFLLGAVKTFEAEASAQRRGFIARLVVLGTLWFAAMPVLVLVAMICAEYIQEPVVSVGGLLTQSLGLAVLSWL---FLTRNEYYKMSSLAHTGMLP 545
++L G +++V+ +L+ +A G+TL + D +IV + + +H++ V G++ DD K + + Y L ++RL LLA FL A+ +AS + + F+ + +G L+F + P+L++ + + + V+ +G ++ L V WL FLTR +Y+++S+L ++ LP
Sbjct: 196 QMLSVGDEVIVTSLLILIASGYTLLQSDL-----GDLDIVIPIVFMVAIIHILIVGFGKVKDDASYKFYENEGVAGYLLSVMRLCLLAWFL-WAINRTGKQASPKLKYFLNKFSAVGILYFLSYPMLIISTDLWPPHYRYKVMLIGDF---AVKLGVFMWLTTLFLTRGDYFQVSTL-NSSFLP 369 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8735.16877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8735.16877.1 >prot_S-dermatodea_contig8735.16877.1 ID=prot_S-dermatodea_contig8735.16877.1|Name=mRNA_S-dermatodea_contig8735.16877.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=145bp MAGSLGFVHLMFVILGRLSDDHHAKSHALDSAPAYFLVLVRLVLLAIFLLback to top mRNA from alignment at S-dermatodea_contig8735:3891..7272+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8735.16877.1 ID=mRNA_S-dermatodea_contig8735.16877.1|Name=mRNA_S-dermatodea_contig8735.16877.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3382bp|location=Sequence derived from alignment at S-dermatodea_contig8735:3891..7272+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8735:3891..7272+ >mRNA_S-dermatodea_contig8735.16877.1 ID=mRNA_S-dermatodea_contig8735.16877.1|Name=mRNA_S-dermatodea_contig8735.16877.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=870bp|location=Sequence derived from alignment at S-dermatodea_contig8735:3891..7272+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |