mRNA_S-dermatodea_contig8732.16876.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8732.16876.1 vs. uniprot
Match: D7FLK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK0_ECTSI) HSP 1 Score: 285 bits (728), Expect = 6.660e-86 Identity = 147/180 (81.67%), Postives = 152/180 (84.44%), Query Frame = 1
Query: 1 MGLTIFLRWEYNLFGDPVGPLIFAVMFLFGDL--------------RMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDILTPRTLQNTGPDGQVFQLIPSPVQIERPAVDYIRDVYAELITMGEGVRRPGDRSDISSDEEDEME 498
MGLTIFLRWEY+LFGDPVGPLIFAVMFLFGDL RMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTD+LTPRTLQNTGPDG RPAV+Y+RDVYAEL+ MGEGVRRPGDRSDISSDEEDEME
Sbjct: 13702 MGLTIFLRWEYSLFGDPVGPLIFAVMFLFGDLVQQLLRRLANIKVKRMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDLLTPRTLQNTGPDG-------------RPAVEYVRDVYAELMGMGEGVRRPGDRSDISSDEEDEME 13868
BLAST of mRNA_S-dermatodea_contig8732.16876.1 vs. uniprot
Match: A0A6H5J8V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V0_9PHAE) HSP 1 Score: 282 bits (722), Expect = 4.120e-85 Identity = 145/180 (80.56%), Postives = 152/180 (84.44%), Query Frame = 1
Query: 1 MGLTIFLRWEYNLFGDPVGPLIFAVMFLFGDL--------------RMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDILTPRTLQNTGPDGQVFQLIPSPVQIERPAVDYIRDVYAELITMGEGVRRPGDRSDISSDEEDEME 498
MGLTIFLRWEY+LFGDPVGPLIFAVMFLFGDL RMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTD+LTPRTLQ+TGPDG RPAV+Y+RDVYAEL+ MGEG+RRPGDRSDISSDEEDEME
Sbjct: 1536 MGLTIFLRWEYSLFGDPVGPLIFAVMFLFGDLVQQLLRHLANIKVKRMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDLLTPRTLQHTGPDG-------------RPAVEYVRDVYAELVGMGEGLRRPGDRSDISSDEEDEME 1702
BLAST of mRNA_S-dermatodea_contig8732.16876.1 vs. uniprot
Match: A0A482S288_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S288_9ARCH) HSP 1 Score: 210 bits (534), Expect = 5.240e-64 Identity = 108/175 (61.71%), Postives = 126/175 (72.00%), Query Frame = 1
Query: 1 MGLTIFLRWEYNLFGDPVGPLIFAVMFLFGDL--------------RMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDILTPRTLQNTGPDGQVFQLIPSPVQIERPAVDYIRDVYAELITMGEGVRRPGDRSDISSDE 483
M + FLR +YN FGD IF V+F G+L R+ WRGLW TK IEGT+DDD+AAKLAIGEG+QA+LEQERLELQALNSERFRHRFLERNRPWILQHL ++LTPR+L+ GPDG RP ++Y+RDVYAEL+ MGEG+RRPGDR DISSDE
Sbjct: 43 MAIEGFLRLDYNPFGDRAMLFIFLVVFGVGELMRLVYARMADIKIKRLNWRGLWATKQIEGTIDDDVAAKLAIGEGKQADLEQERLELQALNSERFRHRFLERNRPWILQHLVELLTPRSLEQPGPDG-------------RPTIEYVRDVYAELMAMGEGLRRPGDRQDISSDE 204
BLAST of mRNA_S-dermatodea_contig8732.16876.1 vs. uniprot
Match: A0A7S1U8F7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8F7_9STRA) HSP 1 Score: 219 bits (557), Expect = 5.380e-63 Identity = 115/182 (63.19%), Postives = 136/182 (74.73%), Query Frame = 1
Query: 4 GLTIFLRWE-----YNLFGDPVGPLIFAVMFLFGDL--------------RMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDILTPRTLQNTGPDGQVFQLIPSPVQIERPAVDYIRDVYAELITMGEGVRRPGDRSDISSDEEDE 492
G+T+FLR E YN F DP+ ++ ++F+ GDL R G+RGLWMTK +EGTVDD++AAKLAIGEGRQA+LEQERLELQALNSERFRHRFLERNRPWILQHL ++LTPR+L++ GPDG RP V+Y+RDVYAELI MGEG+RRPGDRSDISSDEEDE
Sbjct: 494 GITMFLRTEDSGEMYNPFSDPLLGVLILMVFVLGDLLMWLLKKAADIKIKRFGYRGLWMTKQLEGTVDDEVAAKLAIGEGRQADLEQERLELQALNSERFRHRFLERNRPWILQHLVELLTPRSLESIGPDG-------------RPVVEYVRDVYAELIAMGEGMRRPGDRSDISSDEEDE 662
BLAST of mRNA_S-dermatodea_contig8732.16876.1 vs. uniprot
Match: A0A836CC20_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC20_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.640e-60 Identity = 102/134 (76.12%), Postives = 116/134 (86.57%), Query Frame = 1
Query: 97 RMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDILTPRTLQNTGPDGQVFQLIPSPVQIERPAVDYIRDVYAELITMGEGVRRPGDRSDISSDEEDEME 498
R+GW GLWMTKN+EGTVDD++AAKLA+GEGRQA+LEQERLELQALNSERFRHRFLERNRPWILQHLT++LTPRT+Q TGPDG RP V+YIRDVYAEL+ MGEG RRPGDRSDISSDE+D++E
Sbjct: 24 RLGWYGLWMTKNLEGTVDDEVAAKLAVGEGRQADLEQERLELQALNSERFRHRFLERNRPWILQHLTELLTPRTIQQTGPDG-------------RPVVEYIRDVYAELMAMGEGARRPGDRSDISSDEDDDLE 144
BLAST of mRNA_S-dermatodea_contig8732.16876.1 vs. uniprot
Match: A0A7S2WTL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTL2_9STRA) HSP 1 Score: 211 bits (536), Expect = 2.230e-60 Identity = 108/173 (62.43%), Postives = 125/173 (72.25%), Query Frame = 1
Query: 4 GLTIFLRWEYNLFGDPVGPLIFAVMFLFGDL--------------RMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDILTPRTLQNTGPDGQVFQLIPSPVQIERPAVDYIRDVYAELITMGEGVRRPGDRSDISSD 480
G+TIFLR +YNLFGDPV +I ++ L DL R+GW+GLWMTK++EGTVDDD+AAKLAIGEGRQA LEQERLELQALNSERFRHRFL+RNRPWILQHL ++LTP TLQ GPDG RP V+Y+RDVYA+L + EG RR DR DISSD
Sbjct: 591 GVTIFLRTDYNLFGDPVAIVILLIVLLLCDLLQAGAIRLSDVRLRRLGWKGLWMTKHVEGTVDDDVAAKLAIGEGRQAGLEQERLELQALNSERFRHRFLDRNRPWILQHLVELLTPETLQEIGPDG-------------RPVVEYVRDVYAQLTGLREGARRSQDRGDISSD 750
BLAST of mRNA_S-dermatodea_contig8732.16876.1 vs. uniprot
Match: A0A6U6EV38_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6EV38_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.970e-54 Identity = 99/176 (56.25%), Postives = 123/176 (69.89%), Query Frame = 1
Query: 7 LTIFLRWEYNLFGDPVGPLIFAVMFLFGDL--------------RMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDILTPRTLQNTGPDGQVFQLIPSPVQIERPAVDYIRDVYAELITMGEGVRRPGDRSDISSDEEDE 492
+T+FLR +N GDPV P+IF VMF+ DL + WRGLW TK +EGT+DD +AAKLAIGEGRQA+LEQER+ELQALN+E+FR RFLE+NRPW+LQHL +++TP TL GPDG RP +Y+RD+Y++L+ MGEG RR GDR DISSDE DE
Sbjct: 2051 MTVFLRKNFNFLGDPVTPIIFLVMFVMCDLVRATAVSISDAKVDYLDWRGLWTTKQLEGTMDDAVAAKLAIGEGRQADLEQERIELQALNNEQFRRRFLEKNRPWLLQHLVELVTPPTLGAAGPDG-------------RPLAEYLRDIYSDLMAMGEGKRRTGDRPDISSDEGDE 2213
BLAST of mRNA_S-dermatodea_contig8732.16876.1 vs. uniprot
Match: A0A812UJW7_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UJW7_SYMMI) HSP 1 Score: 186 bits (471), Expect = 3.520e-54 Identity = 97/165 (58.79%), Postives = 120/165 (72.73%), Query Frame = 1
Query: 4 GLTIFLRWEYNLFGDPVGPLIFAVMFLFGDLRMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDILTPRTLQNTGPDGQVFQLIPSPVQIERPAVDYIRDVYAELITMGEGVRRPGDRSDISSDEEDEME 498
G+TI+++ YN F DPV L+ +M + D EGTVDDD+AAKLAIGEGRQ +LEQER+ELQALNSERFRHRFLERNRPWILQHL +++TPR+L+N G DG RP V+Y+RDVYAEL+ MGEG++R GDR+DISSDE+DE+E
Sbjct: 265 GMTIYVQNSYNPFADPVACLLIVLMIIGSDG-------------EGTVDDDVAAKLAIGEGRQQDLEQERMELQALNSERFRHRFLERNRPWILQHLVELITPRSLENPGHDG-------------RPVVEYVRDVYAELMAMGEGMKRAGDRADISSDEDDELE 403
BLAST of mRNA_S-dermatodea_contig8732.16876.1 vs. uniprot
Match: A0A7S4RD69_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RD69_9STRA) HSP 1 Score: 191 bits (485), Expect = 3.070e-53 Identity = 94/174 (54.02%), Postives = 121/174 (69.54%), Query Frame = 1
Query: 7 LTIFLRWEYNLFGDPVGPLIFAVMFLFGDL--------------RMGWRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDILTPRTLQNTGPDGQVFQLIPSPVQIERPAVDYIRDVYAELITMGEGVRRPGDRSDISSDEE 486
+T+FLR+EYN GDP P+I +FL ++ W GLW K +EGT+DD IAAKLAIGEGRQA+LEQERLELQALNS+RFRHRFL+RNRPW+L HL +++TPR+L + GPDG RP +++RDVY++L+ +GEG R+ GDRSDISSD+E
Sbjct: 931 ITVFLRYEYNFLGDPAMPIIVLAIFLICEVIRLILCRIANVTVPYFNWHGLWAPKQLEGTMDDAIAAKLAIGEGRQADLEQERLELQALNSDRFRHRFLDRNRPWVLNHLVELITPRSLASVGPDG-------------RPLTEFVRDVYSDLMAIGEGARKSGDRSDISSDDE 1091
BLAST of mRNA_S-dermatodea_contig8732.16876.1 vs. uniprot
Match: A0A7S2DN89_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DN89_9STRA) HSP 1 Score: 189 bits (480), Expect = 6.680e-53 Identity = 104/195 (53.33%), Postives = 119/195 (61.03%), Query Frame = 1
Query: 31 YNLFGDPVGPLIFAVMFLFGDLRMG-----------------------------------------WRGLWMTKNIEGTVDDDIAAKLAIGEGRQANLEQERLELQALNSERFRHRFLERNRPWILQHLTDILTPRTLQNTGPDGQVFQLIPSPVQIERPAVDYIRDVYAELITMGEGVRRPGDRSDISSDEEDE 492
YN F DP LI +M +FGD+ WRGLW+TK IEGTVDDD+AAK+AIGEGRQA+LEQERLELQALNSERFRHRFLERNRPWILQHL ++LTP +L GPDG RP V+Y+RDVYAEL+ MGEG RRPGD SDISSD+ +E
Sbjct: 170 YNPFADPALLLIIIIMLVFGDILQRLLRWLASVSEINFFWIKKMKIHFLYIDHFAYGIVPILKFYRWRGLWVTKQIEGTVDDDVAAKIAIGEGRQADLEQERLELQALNSERFRHRFLERNRPWILQHLVELLTPESLNTIGPDG-------------RPVVEYVRDVYAELMAMGEGARRPGDDSDISSDDGEE 351 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8732.16876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8732.16876.1 >prot_S-dermatodea_contig8732.16876.1 ID=prot_S-dermatodea_contig8732.16876.1|Name=mRNA_S-dermatodea_contig8732.16876.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=166bp MGLTIFLRWEYNLFGDPVGPLIFAVMFLFGDLRMGWRGLWMTKNIEGTVDback to top mRNA from alignment at S-dermatodea_contig8732:597..2266+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8732.16876.1 ID=mRNA_S-dermatodea_contig8732.16876.1|Name=mRNA_S-dermatodea_contig8732.16876.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1670bp|location=Sequence derived from alignment at S-dermatodea_contig8732:597..2266+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8732:597..2266+ >mRNA_S-dermatodea_contig8732.16876.1 ID=mRNA_S-dermatodea_contig8732.16876.1|Name=mRNA_S-dermatodea_contig8732.16876.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=996bp|location=Sequence derived from alignment at S-dermatodea_contig8732:597..2266+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |