prot_S-dermatodea_contig1276.1686.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1276.1686.1
Unique Nameprot_S-dermatodea_contig1276.1686.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length217
Homology
BLAST of mRNA_S-dermatodea_contig1276.1686.1 vs. uniprot
Match: A0A6H5JG00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG00_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 5.220e-22
Identity = 82/222 (36.94%), Postives = 112/222 (50.45%), Query Frame = 0
Query:    8 EFEAVELGNCLTGVGNAALCGGR---------VGSAAAAVKATVRAVHLYPGEAAAWRCLGAALVARALSSSSENAEGRAALV-DANIIYRGVAEASSAS--RQPHSREEGMAALEANYSALLLGATQGTASSKAAKTPEAPEALAESAAISSSPDRLFATALHAARTALSSEAPPDAIAQYKRTTTLRPRALAGWRELAASFELSGQHHASGAALECGVRA 217
            E  A +LG  L+G+    LC GR          G+ + AV+AT RAVHLYPGE ++WR L  A+V  ALS   ++   R  ++ DA+ ++RG+ +  S S   +    ++ +   EA+Y  LLLG  +    S   KT   P AL              A  L A           DAI +YK      PRAL GWRELA  ++LS QH+A+ AALECG +A
Sbjct:  994 ELAAKDLGTALSGIAKTVLCSGRCSGGGGKGKAGNRSRAVRATSRAVHLYPGEPSSWRYLARAMVGEALSWVYKSPGTRDVMLRDAHSLFRGIPKPKSDSGPTRGDGSQDSLLRAEADYLQLLLGQKKTHDGSSTGKTKSFPAAL-------------MAARLAAHGGVDGHGGHEDAIKRYKLALREEPRALVGWRELAVCYQLSNQHNAATAALECGAQA 1202          
BLAST of mRNA_S-dermatodea_contig1276.1686.1 vs. uniprot
Match: D7G059_ECTSI (Similar to Tetratricopeptide repeat protein 37 (TPR repeat protein 37) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G059_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.760e-15
Identity = 74/219 (33.79%), Postives = 97/219 (44.29%), Query Frame = 0
Query:    8 EFEAVELGNCLTGVGNAALCGG---------RVGSAAAAVKATVRAVHLYPGEAAAWRCLGAALVARALSSSSENAEGRAALVDANIIYRGVAEASSASRQPHSREEGMAALEANYSALLLGATQGTASSKAAKTPEAPEALAESAAISSSPDRLFATALHAARTALSSEAPPDAIAQYKRTTTLRPRALAGWRELAASFELSGQHHASGAALECGVRA 217
            E  A +L   L+G+    LC G         + G+ + AV+AT RAVHLYPGE ++WR L     ARA+S S                 RG              ++ +   EA+Y  LLLG                     + ++  S P  L A  + A           DAI +YK     +PRAL GWRELAA +ELS QHHA+ AALECG +A
Sbjct: 1422 ELAARDLATALSGIAKTVLCSGTCSGGDGKGKAGTRSRAVRATSRAVHLYPGEPSSWRYL-----ARAMSDSGPT--------------RG-----------DGSQDSLLRAEADYLQLLLGQNN----------------THDGSSTDSFPAALMAARVAARGGVDGDGGREDAIKRYKLALREQPRALVGWRELAACYELSNQHHAAAAALECGAQA 1594          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1276.1686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG00_9PHAE5.220e-2236.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G059_ECTSI1.760e-1533.79Similar to Tetratricopeptide repeat protein 37 (TP... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1276contigS-dermatodea_contig1276:15783..17224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1276.1686.1mRNA_S-dermatodea_contig1276.1686.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1276 15781..17224 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1276.1686.1 ID=prot_S-dermatodea_contig1276.1686.1|Name=mRNA_S-dermatodea_contig1276.1686.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=217bp
HATAVAAEFEAVELGNCLTGVGNAALCGGRVGSAAAAVKATVRAVHLYPG
EAAAWRCLGAALVARALSSSSENAEGRAALVDANIIYRGVAEASSASRQP
HSREEGMAALEANYSALLLGATQGTASSKAAKTPEAPEALAESAAISSSP
DRLFATALHAARTALSSEAPPDAIAQYKRTTTLRPRALAGWRELAASFEL
SGQHHASGAALECGVRA
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