mRNA_S-dermatodea_contig87144.16861.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig87144.16861.1 vs. uniprot
Match: D7G1V1_ECTSI (HSPC140 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1V1_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 1.470e-18 Identity = 48/73 (65.75%), Postives = 53/73 (72.60%), Query Frame = 1
Query: 1 FHGKFGRRPLPGDVSEFSVIAEGALKENGLPADFLGGEEG------AAAVCAMATAEVSPVCAILGGILGQEV 201
F KFGRRPLP D E + + E AL+ NGLP DFLG E G AA++CA ATAEVSPVCAILGGILGQEV
Sbjct: 236 FQEKFGRRPLPADTPECAAVIESALENNGLPPDFLG-EAGPVAGGAAASLCATATAEVSPVCAILGGILGQEV 307
BLAST of mRNA_S-dermatodea_contig87144.16861.1 vs. uniprot
Match: A0A836CJW8_9STRA (ThiF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW8_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.600e-12 Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 FHGKFGRRPLPGDVSEFSVIAEGALKENGLPADFLGGEEGAAAVCAMATAEVSPVCAILGGILGQEV 201
F K GRRP D + +A+ LK NGLP DF+ +E A +CA A E++PVCA+LGGILGQEV
Sbjct: 226 FEEKHGRRPGASDGDTMTSVAQQCLKRNGLPTDFIASDE-TAVLCAQAQVEINPVCAVLGGILGQEV 291
BLAST of mRNA_S-dermatodea_contig87144.16861.1 vs. uniprot
Match: A0A7S2UZW6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZW6_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 2.750e-6 Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 34 GDVSEFSVIAEGALKENGLPADFLGGEEGAAAVCAMATAEVSPVCAILGGILGQEV 201
GD++E I+ L++N +P DFL E+ +C++A E+SPVCAI+GGI GQEV
Sbjct: 259 GDLNELVQISTRLLQDNEMPPDFLT-EDDLRILCSVANTEISPVCAIVGGIWGQEV 313
BLAST of mRNA_S-dermatodea_contig87144.16861.1 vs. uniprot
Match: UPI0018D7C9ED (SUMO-activating enzyme subunit 1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7C9ED) HSP 1 Score: 50.4 bits (119), Expect = 1.810e-5 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 1 FHGKFGRRPLP----GDVSEFSVIAEGALKENGLPADFLGGEEGAAAVCAMATAEVSPVCAILGGILGQEV 201
F +FGR P P D +E + + L E G+ ADF+ + A+ CA AE+SPVCA++GG+LGQEV
Sbjct: 249 FQQEFGRNPSPDKLENDKTELLRLRDEVLDEAGIKADFV--SDDFASHCA---AELSPVCAVVGGVLGQEV 314
BLAST of mRNA_S-dermatodea_contig87144.16861.1 vs. uniprot
Match: UPI0014558456 (SUMO-activating enzyme subunit 1-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014558456) HSP 1 Score: 50.1 bits (118), Expect = 2.480e-5 Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 1 FHGKFGRRPLPG----DVSEFSVIAEGALKENGLPADFLGGEEGAAAVCAMATAEVSPVCAILGGILGQEV 201
F +FGR P PG D SE + + + E GL D++ + A+ CA AE+SPVCAI+GG++ QE+
Sbjct: 245 FQEEFGRNPSPGNLENDKSELLKLRDEVVDELGLKTDYIVINDDFASHCA---AEISPVCAIVGGVVAQEI 312
BLAST of mRNA_S-dermatodea_contig87144.16861.1 vs. uniprot
Match: A0A8B7XYL5_ACAPL (SUMO-activating enzyme subunit 1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XYL5_ACAPL) HSP 1 Score: 49.7 bits (117), Expect = 3.400e-5 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 1 FHGKFGRRPLP----GDVSEFSVIAEGALKENGLPADFLGGEEGAAAVCAMATAEVSPVCAILGGILGQEV 201
F +FGR P P D +E + + L E G+ ADF+ + A+ CA AE+SPVCA++GG+LGQEV
Sbjct: 249 FQEEFGRNPSPDNLENDKTELLRLRDEVLDEVGVKADFV--SDDFASHCA---AELSPVCAVVGGVLGQEV 314
BLAST of mRNA_S-dermatodea_contig87144.16861.1 vs. uniprot
Match: A0A7S2WPN4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WPN4_9STRA) HSP 1 Score: 48.1 bits (113), Expect = 7.220e-5 Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 49 FSVIAEGALKENGLPADFLGGEEGAAAVCAMATAEVSPVCAILGGILGQEV 201
FS I + LK +GL +LG E+ + ++ A+VSPVCA+LGG+LG EV
Sbjct: 115 FSKITQQYLKHSGLDTQYLGDEKQLDYLYTISNAQVSPVCAVLGGVLGNEV 165 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig87144.16861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig87144.16861.1 >prot_S-dermatodea_contig87144.16861.1 ID=prot_S-dermatodea_contig87144.16861.1|Name=mRNA_S-dermatodea_contig87144.16861.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=72bp FHGKFGRRPLPGDVSEFSVIAEGALKENGLPADFLGGEEGAAAVCAMATAback to top mRNA from alignment at S-dermatodea_contig87144:277..492+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig87144.16861.1 ID=mRNA_S-dermatodea_contig87144.16861.1|Name=mRNA_S-dermatodea_contig87144.16861.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=216bp|location=Sequence derived from alignment at S-dermatodea_contig87144:277..492+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig87144:277..492+ >mRNA_S-dermatodea_contig87144.16861.1 ID=mRNA_S-dermatodea_contig87144.16861.1|Name=mRNA_S-dermatodea_contig87144.16861.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=432bp|location=Sequence derived from alignment at S-dermatodea_contig87144:277..492+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |