prot_S-dermatodea_contig8710.16850.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig8710.16850.1
Unique Name	prot_S-dermatodea_contig8710.16850.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	213

Homology

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BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: D7G6P5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P5_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 3.110e-101
Identity = 142/184 (77.17%), Postives = 162/184 (88.04%), Query Frame = 0

Query:   28 VGATATNSAVTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGELL 211
            V A A  + VTHRV+FD+SIGG  + RITMGLFGNAVP TV+NFR+LCTGEAG GKVY+KPLHYK S FHR+IPQFMLQGGDFTH TGTGGESIYGGKFDDEAF P+L+H+KPGV+SMAN+GK+TNGSQFFICTVPTPWL+ KHVIFGQVEE SM++V  IEK+GSR G  S +VEITDSGEL+
Sbjct:   18 VSADADVTDVTHRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELV 201

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BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A835ZLK1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLK1_9STRA)

HSP 1 Score: 259 bits (662), Expect = 4.040e-85
Identity = 125/174 (71.84%), Postives = 141/174 (81.03%), Query Frame = 0

Query:   37 VTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 210
            VT  VFFD+ I G+P  RI MGL+G AVP TV+NFR LCTGE G GKVY KPL YK S FHRIIPQFMLQGGDFTH TGTGGESIYGGKFDDEAF  +L H +PG++SMANAG NTNGSQFFI TV TPWLD KHVIFG+V E  MDVV +IEK+GS+ G P A+V++ DSGE+
Sbjct:   24 VTKMVFFDMEIDGKPGGRIVMGLYGEAVPKTVENFRALCTGEKGVGKVYHKPLTYKGSSFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPKELKHKEPGMLSMANAGPNTNGSQFFITTVATPWLDGKHVIFGKVLEG-MDVVKSIEKLGSQSGRPQAKVKVADSGEI 196

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BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A2K1IH38_PHYPA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IH38_PHYPA)

HSP 1 Score: 239 bits (609), Expect = 5.250e-77
Identity = 129/210 (61.43%), Postives = 147/210 (70.00%), Query Frame = 0

Query:    1 MARILKSLAVAAVGLFAAASAAGDVTEVGATATNSAVTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 210
            MAR    LAV A+ L A  S A    E G       VTH+VFFDV IGGQP+ R+ MGLFG A P TV+NFR LCTGE G G +  KPLH+K S FHRIIP FM+QGGDFTH  G GGESIYG KF DE+F   L H  PG++SMANAG NTNGSQFFICTV T WLD +HV+FG+V  S MDVVY +E  G+ GGTP  +V I DSGE+
Sbjct:    1 MARTGPMLAVTALVLLATISCAQAKIEKGL----DEVTHKVFFDVEIGGQPAGRVVMGLFGKAAPKTVENFRALCTGEKGKG-LSGKPLHFKGSAFHRIIPSFMIQGGDFTHGNGRGGESIYGEKFADESFK--LKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDGRHVVFGKVL-SGMDVVYKVEAEGTSGGTPKKKVTIADSGEI 202

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BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A7J7Q6Q0_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q6Q0_9CHLO)

HSP 1 Score: 234 bits (597), Expect = 3.490e-75
Identity = 118/176 (67.05%), Postives = 135/176 (76.70%), Query Frame = 0

Query:   35 SAVTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 210
            +AVT++VFFD+ I GQP+ RI MGLFG+ VP TV+NFR LCTGE GTGK   KPLH+K S+FHR+IPQFMLQGGDFT   GTGGESIYG KF DE F   L H  PG +SMANAG NTNGSQFFI TV T WLD +HV+FG+V E  MDVVY +E +GS GG  S +V I DSGEL
Sbjct:   29 AAVTNKVFFDIEIDGQPAGRIVMGLFGDVVPKTVENFRALCTGEKGTGKS-GKPLHFKGSVFHRVIPQFMLQGGDFTRSDGTGGESIYGEKFADENFK--LKHKGPGYLSMANAGPNTNGSQFFITTVKTTWLDGRHVVFGKVIEG-MDVVYKVEAVGSGGGATSKKVVIADSGEL 200

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BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A8J282_CHLRE (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Chlamydomonas TaxID=3052 RepID=A8J282_CHLRE)

HSP 1 Score: 234 bits (597), Expect = 6.300e-75
Identity = 122/208 (58.65%), Postives = 150/208 (72.12%), Query Frame = 0

Query:    6 KSLAVAAVGLFAAASAAGDVTEVGA---TATNSAVTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 210
            ++LA+A +GL   A+      + G+    A ++ +TH+V+FDV I G+P  RI +GL+GN VP TV+NFR LCTGE GTG    KPLH+KNSIFHRIIPQFM+QGGDFT   GTGGESIYG +F DE F   L H  PGV+SMANAG +TNGSQFFI TV T WLD +HV+FG+V E  MDVVY +E +G+  G PS +V I DSGEL
Sbjct:   17 RALALALLGLVVLAATGVHAAKKGSKKKVAADTTITHKVYFDVEIDGKPEGRIVVGLYGNTVPKTVENFRALCTGEKGTG-TSGKPLHFKNSIFHRIIPQFMIQGGDFTRGDGTGGESIYGSRFPDENFA--LKHTGPGVLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVVEG-MDVVYKVEAVGTSSGKPSKKVTIADSGEL 220

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BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: C1EA22_MICCC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EA22_MICCC)

HSP 1 Score: 233 bits (593), Expect = 1.160e-74
Identity = 117/174 (67.24%), Postives = 135/174 (77.59%), Query Frame = 0

Query:   37 VTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 210
            +T++V+FDVSIGGQP+ RITMGL+G AVP TV+NFR LCTGE G G    KPLHYK SIFHRIIPQFMLQGGDFT   G GGESIYG KF DE+F   + H+  G +SMANAG NTNGSQFFI T+ T WLD +HV+FG+V E  MDVVY +E +GS+ G PS  V ITDSGEL
Sbjct:   27 ITNKVYFDVSIGGQPAGRITMGLYGTAVPKTVENFRALCTGEKGVGN-RGKPLHYKGSIFHRIIPQFMLQGGDFTDGNGRGGESIYGEKFADESFA--IKHSGAGDLSMANAGPNTNGSQFFITTIKTAWLDGRHVVFGKVLEG-MDVVYKVEAVGSQSGKPSKEVVITDSGEL 196

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BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: C1MI65_MICPC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MI65_MICPC)

HSP 1 Score: 233 bits (593), Expect = 1.320e-74
Identity = 121/186 (65.05%), Postives = 140/186 (75.27%), Query Frame = 0

Query:   29 GATATNSA--VTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGELLA 212
            GATA++++  VT +VFFDVSIGG P+ RITMGL+G+ VP T +NFR L TGE GTGK   KPLHYK S FHR+IP FM+QGGDFT   G GGESIYG KF DE F   L H  PG +SMAN+G NTNGSQFFICT+ T WLD +HV+FG+V E  MDVVY IE +GS  GTPS  V ITDSG+L A
Sbjct:   21 GATASDASPKVTDKVFFDVSIGGIPAGRITMGLYGDVVPKTAENFRALATGEKGTGK-RGKPLHYKGSTFHRVIPNFMIQGGDFTDGNGRGGESIYGAKFADENF--SLQHAGPGDLSMANSGPNTNGSQFFICTIKTSWLDGRHVVFGKVLEG-MDVVYKIEAVGSSSGTPSKEVTITDSGQLPA 202

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BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A835Y0M8_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y0M8_9CHLO)

HSP 1 Score: 233 bits (594), Expect = 1.340e-74
Identity = 126/205 (61.46%), Postives = 147/205 (71.71%), Query Frame = 0

Query:    8 LAVAAVGLFAAASA--AGDVTEVGATATNSAVTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 210
            LA+AA+ L AA+S   A   ++    A ++ VTH+V+FD+ I G+P  RI MGL+GN VP TVDNFR LCTGE G G    KPL YK SIFHRIIPQFMLQGGDFT   GTGGESIYG +F DE F   L H  PGV+SMANAG +TNGSQFFI TV T WLD +HV+FG+VE+  MD+VY IE  GS  G PS  V+I DSGEL
Sbjct:   11 LAIAALVLVAASSGVHAAKKSKKSKIAADTTVTHKVYFDIEIDGKPEGRIVMGLYGNTVPKTVDNFRALCTGEKGQG-TSGKPLTYKGSIFHRIIPQFMLQGGDFTRGDGTGGESIYGSRFPDENFA--LKHTGPGVLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVEDG-MDLVYKIESYGSSSGKPSKTVKIVDSGEL 211

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BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A7S1FIF5_NOCSC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FIF5_NOCSC)

HSP 1 Score: 231 bits (590), Expect = 2.540e-74
Identity = 115/174 (66.09%), Postives = 133/174 (76.44%), Query Frame = 0

Query:   37 VTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 210
            VTH+VFFD+++ G+ + RI MGL+G+ VP TV+NFR LCTGE G GK   KPLHYK S FHR+IP FMLQGGDFTH TGTGGESIYG KF+DE F   L H  PG +SMANAGKNTNGSQFFI TV T WLD KHV+FG+V E  MD+V  +E +GS+ G  S  VEI DSGEL
Sbjct:   21 VTHKVFFDITLDGEDAGRIVMGLYGDVVPKTVENFRALCTGEKGVGKS-GKPLHYKGSKFHRVIPNFMLQGGDFTHGTGTGGESIYGSKFNDENF--QLKHTAPGKLSMANAGKNTNGSQFFITTVTTSWLDGKHVVFGEVLEG-MDIVQKVEAVGSQSGKTSKLVEIKDSGEL 190

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BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A0D2MNZ0_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MNZ0_9CHLO)

HSP 1 Score: 232 bits (591), Expect = 2.840e-74
Identity = 116/174 (66.67%), Postives = 133/174 (76.44%), Query Frame = 0

Query:   37 VTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 210
            VTH+VFFD+ I G+P+ RI MGLFG+ VP TV+NFR LCTGE GTGK   KPLH+K S+FHRIIPQFM+QGGDFT   GTGGESIYG KF DE F   L H  PG +SMANAG NTNGSQFFI TV T WLD +HV+FG+V E  MDVV  +E +GS  GTPS +V I DSGE+
Sbjct:   31 VTHKVFFDIEIDGKPAGRIVMGLFGDIVPKTVENFRALCTGEKGTGKS-GKPLHFKGSVFHRIIPQFMIQGGDFTRGDGTGGESIYGEKFADENFK--LKHKAPGYLSMANAGPNTNGSQFFITTVKTAWLDGRHVVFGKVIEG-MDVVLKVEAIGSGSGTPSKKVTIADSGEI 200

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6P5_ECTSI	3.110e-101	77.17	Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca...	[more]
A0A835ZLK1_9STRA	4.040e-85	71.84	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon...	[more]
A0A2K1IH38_PHYPA	5.250e-77	61.43	Peptidyl-prolyl cis-trans isomerase n=2 Tax=Physco...	[more]
A0A7J7Q6Q0_9CHLO	3.490e-75	67.05	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Scened...	[more]
A8J282_CHLRE	6.300e-75	58.65	Peptidyl-prolyl cis-trans isomerase n=4 Tax=Chlamy...	[more]
C1EA22_MICCC	1.160e-74	67.24	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Microm...	[more]
C1MI65_MICPC	1.320e-74	65.05	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Microm...	[more]
A0A835Y0M8_9CHLO	1.340e-74	61.46	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Edapho...	[more]
A0A7S1FIF5_NOCSC	2.540e-74	66.09	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctil...	[more]
A0A0D2MNZ0_9CHLO	2.840e-74	66.67	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monora...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 169..184 score: 44.28 coord: 156..168 score: 71.02 coord: 96..108 score: 75.67 coord: 59..74 score: 52.23 coord: 141..156 score: 75.68
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 45..206 e-value: 9.4E-43 score: 146.2
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50072	CSA_PPIASE_2	coord: 42..209 score: 40.492
IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	PIRSF	PIRSF001467	Peptidylpro_ismrse	coord: 26..212 e-value: 5.3E-68 score: 226.0
IPR029000	Cyclophilin-like domain superfamily	GENE3D	2.40.100.10		coord: 26..211 e-value: 1.3E-76 score: 258.3
IPR029000	Cyclophilin-like domain superfamily	SUPERFAMILY	50891	Cyclophilin-like	coord: 33..210
None	No IPR available	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 39..210
None	No IPR available	PANTHER	PTHR11071:SF447	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63	coord: 39..210
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..212
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.723
IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	PROSITE	PS00170	CSA_PPIASE_1	coord: 91..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig8710	contig	S-dermatodea_contig8710:5169..8608 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig8710.16850.1	mRNA_S-dermatodea_contig8710.16850.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig8710 5169..8608 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig8710.16850.1 ID=prot_S-dermatodea_contig8710.16850.1|Name=mRNA_S-dermatodea_contig8710.16850.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=213bp
MARILKSLAVAAVGLFAAASAAGDVTEVGATATNSAVTHRVFFDVSIGGQ
PSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRII
PQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGK
NTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSA
RVEITDSGELLA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002130	Cyclophilin-type_PPIase_dom
IPR024936	Cyclophilin-type_PPIase
IPR029000	Cyclophilin-like_dom_sf
IPR020892	Cyclophilin-type_PPIase_CS