prot_S-dermatodea_contig87037.16843.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig87037.16843.1
Unique Nameprot_S-dermatodea_contig87037.16843.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length44
Homology
BLAST of mRNA_S-dermatodea_contig87037.16843.1 vs. uniprot
Match: D7G092_ECTSI (Smr domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G092_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 3.310e-13
Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    2 MDLHGLHVAEAIEVLDRELAVLLQNEIDSVRVLAGTGHHSKGP 44
            +DLHGLHVAEA+EVLDRE+  L +  + SVRVL GTGHHSKGP
Sbjct:   34 LDLHGLHVAEAVEVLDREMGALAERGLCSVRVLTGTGHHSKGP 76          
BLAST of mRNA_S-dermatodea_contig87037.16843.1 vs. uniprot
Match: A0A6H5JKG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG2_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 6.010e-12
Identity = 32/43 (74.42%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    2 MDLHGLHVAEAIEVLDRELAVLLQNEIDSVRVLAGTGHHSKGP 44
            MDLHGLHVAEA+EVLDRE+  L    + SVRVL GTGHHSKGP
Sbjct:  561 MDLHGLHVAEAVEVLDREMGALAARGLCSVRVLTGTGHHSKGP 603          
BLAST of mRNA_S-dermatodea_contig87037.16843.1 vs. uniprot
Match: G4ZFB7_PHYSP (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=G4ZFB7_PHYSP)

HSP 1 Score: 58.2 bits (139), Expect = 1.090e-8
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 MMDLHGLHVAEAIEVLDRELAVLLQNEIDSVRVLAGTGHHSKGP 44
            MMDLHGLHVAEA+E L + L  L    +DS+ ++ G+GHHSKGP
Sbjct:  519 MMDLHGLHVAEAVEFLTQMLPKLADESVDSIYLVTGSGHHSKGP 562          
BLAST of mRNA_S-dermatodea_contig87037.16843.1 vs. uniprot
Match: A0A0W8DKZ9_PHYNI (Membrane metallo-endopeptidase 1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DKZ9_PHYNI)

HSP 1 Score: 57.4 bits (137), Expect = 1.970e-8
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 MMDLHGLHVAEAIEVLDRELAVLLQNEIDSVRVLAGTGHHSKGP 44
            MMDLHGLHVAEA+E L + L  L    +DS+ ++ G+GHHSKGP
Sbjct:  259 MMDLHGLHVAEAVEFLTQMLPKLADEGVDSIYLVTGSGHHSKGP 302          
BLAST of mRNA_S-dermatodea_contig87037.16843.1 vs. uniprot
Match: H3GJW5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJW5_PHYRM)

HSP 1 Score: 57.4 bits (137), Expect = 2.040e-8
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 MMDLHGLHVAEAIEVLDRELAVLLQNEIDSVRVLAGTGHHSKGP 44
            MMDLHGLHVAEA+E L + L  L    +DS+ ++ G+GHHSKGP
Sbjct:  514 MMDLHGLHVAEAVEFLTQMLPKLADEGVDSIYLVTGSGHHSKGP 557          
BLAST of mRNA_S-dermatodea_contig87037.16843.1 vs. uniprot
Match: A0A0W8C524_PHYNI (NEDD4-binding protein 2 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C524_PHYNI)

HSP 1 Score: 57.4 bits (137), Expect = 2.040e-8
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 MMDLHGLHVAEAIEVLDRELAVLLQNEIDSVRVLAGTGHHSKGP 44
            MMDLHGLHVAEA+E L + L  L    +DS+ ++ G+GHHSKGP
Sbjct:  489 MMDLHGLHVAEAVEFLTQMLPKLADEGVDSIYLVTGSGHHSKGP 532          
BLAST of mRNA_S-dermatodea_contig87037.16843.1 vs. uniprot
Match: M4B571_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B571_HYAAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.780e-8
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 MMDLHGLHVAEAIEVLDRELAVLLQNEIDSVRVLAGTGHHSKGP 44
            MMDLHGLHVAEA+E L + L  L    +DS+ ++ G+GHHSKGP
Sbjct:  520 MMDLHGLHVAEAVEFLAQMLPKLADEGVDSIYLVTGSGHHSKGP 563          
BLAST of mRNA_S-dermatodea_contig87037.16843.1 vs. uniprot
Match: D0MT46_PHYIT (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=D0MT46_PHYIT)

HSP 1 Score: 57.0 bits (136), Expect = 2.780e-8
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 MMDLHGLHVAEAIEVLDRELAVLLQNEIDSVRVLAGTGHHSKGP 44
            MMDLHGLHVAEA+E L + L  L    +DS+ ++ G+GHHSKGP
Sbjct:  513 MMDLHGLHVAEAVEFLAQMLPKLADEGVDSIYLVTGSGHHSKGP 556          
BLAST of mRNA_S-dermatodea_contig87037.16843.1 vs. uniprot
Match: F0WYU9_9STRA (Uncharacterized protein AlNc14C400G11359 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WYU9_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.780e-8
Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    1 MMDLHGLHVAEAIEVLDRELAVLLQNEIDSVRVLAGTGHHSKGP 44
            +MDLHGLHV EA+E L   L  L ++ +D+VR++ GTGHHS+GP
Sbjct:  459 LMDLHGLHVVEAVEFLRSWLPQLAEDGLDTVRIVTGTGHHSRGP 502          
BLAST of mRNA_S-dermatodea_contig87037.16843.1 vs. uniprot
Match: A0A484DXY4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXY4_BRELC)

HSP 1 Score: 56.6 bits (135), Expect = 3.810e-8
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 MMDLHGLHVAEAIEVLDRELAVLLQNEIDSVRVLAGTGHHSKGP 44
            MMDLHGLHVAEA+E+L + L       +DS+ ++ G+GHHSKGP
Sbjct:  504 MMDLHGLHVAEAVELLAKMLPKFADEGVDSIYLVTGSGHHSKGP 547          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig87037.16843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G092_ECTSI3.310e-1372.09Smr domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JKG2_9PHAE6.010e-1274.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
G4ZFB7_PHYSP1.090e-859.09Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]
A0A0W8DKZ9_PHYNI1.970e-859.09Membrane metallo-endopeptidase 1 n=1 Tax=Phytophth... [more]
H3GJW5_PHYRM2.040e-859.09Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0W8C524_PHYNI2.040e-859.09NEDD4-binding protein 2 n=7 Tax=Phytophthora TaxID... [more]
M4B571_HYAAE2.780e-859.09Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
D0MT46_PHYIT2.780e-859.09Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
F0WYU9_9STRA2.780e-856.82Uncharacterized protein AlNc14C400G11359 n=1 Tax=A... [more]
A0A484DXY4_BRELC3.810e-856.82Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002625Smr domainPFAMPF01713Smrcoord: 3..42
e-value: 9.3E-8
score: 32.3
IPR002625Smr domainPROSITEPS50828SMRcoord: 2..44
score: 13.48
NoneNo IPR availableGENE3D3.30.1370.110coord: 1..44
e-value: 6.6E-10
score: 40.8
NoneNo IPR availablePANTHERPTHR46651:SF1POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7coord: 1..44
NoneNo IPR availablePANTHERPTHR46651FAMILY NOT NAMEDcoord: 1..44
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 2..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig87037contigS-dermatodea_contig87037:377..508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig87037.16843.1mRNA_S-dermatodea_contig87037.16843.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig87037 377..532 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig87037.16843.1 ID=prot_S-dermatodea_contig87037.16843.1|Name=mRNA_S-dermatodea_contig87037.16843.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=44bp
MMDLHGLHVAEAIEVLDRELAVLLQNEIDSVRVLAGTGHHSKGP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002625Smr_dom
IPR036063Smr_dom_sf