mRNA_S-dermatodea_contig8680.16828.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8680.16828.1 vs. uniprot
Match: D8LQY8_ECTSI (SCP-domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY8_ECTSI) HSP 1 Score: 172 bits (435), Expect = 7.240e-46 Identity = 90/168 (53.57%), Postives = 105/168 (62.50%), Query Frame = 2
Query: 44 SAGALNSVLELHNAARCMHGAEPLQFAETVAITARAYAGKLTSEANCGVTEAEHDTDLGENVFVCAGPSDAA------LPCASAQGAMGLFYEGQLGSGKTSTYGARAKQVLWKPTTRLGCGLDTCTKDGLTYSALVCHYSPPMNPGIVATEADLEPKTRSSAACGYD 529
S L+ +LELHNAARCMH PL+FAE VA TA+ YA L SE+ CG E H T LGENVFVCA S + C S + AM FY+ Q+G G TSTYG RA QVLWK TT++GC L C KDGLTY LVC YSPP G TE+++ + S CGYD
Sbjct: 97 SGDPLDRLLELHNAARCMHATGPLEFAEPVAATAKTYADLLASESMCGSAETAHSTGLGENVFVCAASSSLSGDGAPTAACFSPESAMEAFYDSQVGGGPTSTYGPRATQVLWKSTTQIGCALRACEKDGLTYDILVCRYSPPA--GEDTTESEVALEANSKTTCGYD 262
BLAST of mRNA_S-dermatodea_contig8680.16828.1 vs. uniprot
Match: A0A6H5KE93_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE93_9PHAE) HSP 1 Score: 169 bits (427), Expect = 6.260e-45 Identity = 90/168 (53.57%), Postives = 107/168 (63.69%), Query Frame = 2
Query: 44 SAGALNSVLELHNAARCMHGAEPLQFAETVAITARAYAGKLTSEANCGVTEAEHDTDLGENVFVCAGPSDAA------LPCASAQGAMGLFYEGQLGSGKTSTYGARAKQVLWKPTTRLGCGLDTCTKDGLTYSALVCHYSPPMNPGIVATEADLEPKTRSSAACGYD 529
SA L+ +LELHNAARCMH PL+FAE VA TA+ YA L SE+ CG EA H T LGENVFVCA S + C S + AM FY+ Q+G G TSTYG A QVLWK TT++GC L C K+GLTY LVC YSPP G ATE+++ + S CGY+
Sbjct: 80 SADPLDRLLELHNAARCMHATGPLEFAEPVAATAKTYADVLASESMCGSAEAAHSTGLGENVFVCAASSSFSGNGAPTSACFSPEIAMEAFYDSQVGGGSTSTYGPYATQVLWKSTTQIGCALRACEKEGLTYDILVCRYSPPA--GEDATESEVALEANSKTTCGYE 245
BLAST of mRNA_S-dermatodea_contig8680.16828.1 vs. uniprot
Match: D8LED1_ECTSI (PR1-like metalloprotease n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED1_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 4.270e-18 Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 2
Query: 65 VLELHNAARCMHGAEPLQFAETVAITARAYAGKLTSEANCGVTEAEHDT--DLGENVFVCAGPSDAALPCASAQGAMGLFYEGQLGSGKTSTYGARAKQVLWKPTTRLGCGLDTCTKDGLTYSALVCHYSP 451
+L+LHN ARC+HGAEPL + ET+ TAR +A +LTS NCG T GEN+++C G +D C G + Y+ + G + Y RA+++LW TT+LGC + +C + LVC+Y P
Sbjct: 98 LLDLHNEARCVHGAEPLAWDETMEETARGHAEELTSRQNCGYLFWSDVTAHGYGENLYLCYGAAD----CMMYDGVLDTMYDYAVDDGPVTEYDIRARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDP 224
BLAST of mRNA_S-dermatodea_contig8680.16828.1 vs. uniprot
Match: D7G7J6_ECTSI (Putative zinc metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J6_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 4.450e-18 Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 2
Query: 65 VLELHNAARCMHGAEPLQFAETVAITARAYAGKLTSEANCGVTEAEHDT--DLGENVFVCAGPSDAALPCASAQGAMGLFYEGQLGSGKTSTYGARAKQVLWKPTTRLGCGLDTCTKDGLTYSALVCHYSP 451
+L+LHN ARC+HGAEPL + ET+ TAR +A +LTS NCG T GEN+++C G +D C G + Y+ + G + Y RA+++LW TT+LGC + +C + LVC+Y P
Sbjct: 250 LLDLHNEARCVHGAEPLAWDETMEETARGHAEELTSRQNCGYLFWSDVTAHGYGENLYLCYGAAD----CMMYDGVLDTMYDYAVDDGPVTEYDIRARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDP 376
BLAST of mRNA_S-dermatodea_contig8680.16828.1 vs. uniprot
Match: D8LED3_ECTSI (WSC domain protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LED3_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 7.350e-18 Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 2
Query: 65 VLELHNAARCMHGAEPLQFAETVAITARAYAGKLTSEANCGVTEAEHDT--DLGENVFVCAGPSDAALPCASAQGAMGLFYEGQLGSGKTSTYGARAKQVLWKPTTRLGCGLDTCTKDGLTYSALVCHYSP 451
+L+LHN ARC+HGAEPL + ET+ TAR +A +LTS NCG T GEN+++C G +D C G + Y+ + G + Y RA+++LW TT+LGC + +C + LVC+Y P
Sbjct: 118 LLDLHNEARCVHGAEPLAWDETMEETARDHAEELTSRQNCGYLFWSDVTAHGYGENLYLCYGAAD----CMMYDGVLDTMYDYAVDDGPVTEYDIRARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDP 244
BLAST of mRNA_S-dermatodea_contig8680.16828.1 vs. uniprot
Match: A0A6H5KK50_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK50_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 1.340e-16 Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 2
Query: 56 LNSVLELHNAARCMHGAEPLQFAETVAITARAYAGKLTSEANCGVTEAEHDT--DLGENVFVCAGPSDAALPCASAQGAMGLFYEGQLGSGKTSTYGARAKQVLWKPTTRLGCGLDTCTKDGLTYSALVCHYSPPMNPG 466
+ +L+LHN ARC+HGA+PL +++ V +A +A +LT + + + D GEN+F+C G C + + AM Y ++ G + Y A Q+LWK T ++GC L CT G Y+ LVC Y P N G
Sbjct: 80 MTGLLDLHNEARCVHGADPLGWSDPVTSSAAEHAARLTDQCTSSLFHSTTDQRYGYGENLFMCWGTDT----CYNHEYAMEKLYVEEVQFGAVTDYIGHATQILWKSTKKVGCVLAQCTNGGTPYTFLVCQYDPAGNMG 214
BLAST of mRNA_S-dermatodea_contig8680.16828.1 vs. uniprot
Match: D8PK60_SCHCM (SCP domain-containing protein (Fragment) n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8PK60_SCHCM) HSP 1 Score: 57.8 bits (138), Expect = 3.130e-6 Identity = 43/135 (31.85%), Postives = 63/135 (46.67%), Query Frame = 2
Query: 68 LELHNAARCMHGAEPLQFAETVAITARAYAGKLTSEANCGVTEAEHDTDLGENVFVCAGPSDAALPCASAQGAMGLFYEGQLGSGKTSTYGARAKQVLWKPTTRLGCGLDTCTK----DGLTYSALVCHYSPPMN 460
L+LHNA R HGA+PL +++ VA A+ Y+ K E + G GEN+ G + +GA+ ++ + + QV+WK TT+LGCG+ C D S VC Y+PP N
Sbjct: 37 LDLHNAERAKHGADPLTWSDEVAKYAQDYSAKCVWEHSGG--------QYGENLAAGTG--------LTIEGAVNMWNAESKDYDPANPQYSHWTQVVWKGTTQLGCGVTVCPSVAGMDVRPTSLYVCSYNPPGN 155
BLAST of mRNA_S-dermatodea_contig8680.16828.1 vs. uniprot
Match: A0A0D7B7I6_9AGAR (PR-1-like protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7B7I6_9AGAR) HSP 1 Score: 54.7 bits (130), Expect = 4.150e-5 Identity = 43/152 (28.29%), Postives = 66/152 (43.42%), Query Frame = 2
Query: 11 PVSETQPLLGFSAGALNSVLELHNAARCMHGAEPLQFAETVAITARAYAGKLTSEANCGVTEAEHDTDLGENVFVCAGPSDAALPCASAQGAMGLFYEGQLGSGKTSTYGARAKQVLWKPTTRLGCGLDTCTK--DGLTYSALVCHYSPPMN 460
P +E P + L+ HN+ R H A PL + + +A A+ YA K + + G GEN+ + P AA GA+ ++ + + + + QV+WK TT+LGCG+ C +G T VC Y P N
Sbjct: 19 PRAENPPHTIHARAEPQEYLDAHNSVRAQHNAAPLVWDDALAQYAQDYANKCVWQHSGG--------PYGENLAAGSEPLTAA-------GAVKMWADEEKDYDPANPQYSHYTQVVWKSTTKLGCGVAKCDNILEGFTADYYVCSYDPAGN 155
BLAST of mRNA_S-dermatodea_contig8680.16828.1 vs. uniprot
Match: A0A7S2K001_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2K001_9DINO) HSP 1 Score: 53.5 bits (127), Expect = 9.830e-5 Identity = 41/134 (30.60%), Postives = 59/134 (44.03%), Query Frame = 2
Query: 77 HNAARCMHGAEPLQFAETVAITARAYAGKLTSEANCGVTEAEHDTDLGENVFVCAGPSDAALPCASAQGAM------GLFYEGQLGSGKTSTYGARAKQVLWKPTTRLGCGLDTCTKDGLTYSALVCHYSPPMN 460
HN RCMHG L++A+++A +A+A+A G E D GEN+ DA + + GL + + G+ Y QV+WK + +LGCG + G VCHYSP N
Sbjct: 2 HNVYRCMHGVPDLEWADSLAASAQAWADN-------GKFEHTKDPKYGENLAWGTPTEDAEAAVSHWYSEINNTVLRGLAGDVETSKGEVGHY----TQVVWKGSDKLGCGKGKAEQGGTLGDFWVCHYSPAGN 124 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8680.16828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8680.16828.1 >prot_S-dermatodea_contig8680.16828.1 ID=prot_S-dermatodea_contig8680.16828.1|Name=mRNA_S-dermatodea_contig8680.16828.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=147bp MHGAEPLQFAETVAITARAYAGKLTSEANCGVTEAEHDTDLGENVFVCAGback to top mRNA from alignment at S-dermatodea_contig8680:621..8201- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8680.16828.1 ID=mRNA_S-dermatodea_contig8680.16828.1|Name=mRNA_S-dermatodea_contig8680.16828.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7581bp|location=Sequence derived from alignment at S-dermatodea_contig8680:621..8201- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8680:621..8201- >mRNA_S-dermatodea_contig8680.16828.1 ID=mRNA_S-dermatodea_contig8680.16828.1|Name=mRNA_S-dermatodea_contig8680.16828.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at S-dermatodea_contig8680:621..8201- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |