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Homology
BLAST of mRNA_S-dermatodea_contig8675.16821.1 vs. uniprot
Match: A0A6H5JZF2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZF2_9PHAE) HSP 1 Score: 252 bits (643), Expect = 1.010e-77 Identity = 131/188 (69.68%), Postives = 154/188 (81.91%), Query Frame = 1
Query: 1 YGGDVSATEGKAVEPTCLHVYVRPATIESFKANVQGVWTDDNKVARHSLSPPLVNQARKEERPLWYTSMHPDTPLHSSLPLNTAVALPLSLSVFRKDLCFVFFALDDVNRQDTAMNVLTQLSKAAGVALSAAFPAYEKDDGSHSRTSTAPSKSVESGGSGSSNQPREEAPLNLDVRWDELTDVEFMVN 564
Y GD+SA EGK +EP CLHVY RPATIESFK +V G DDN ARHSLSP LV++ARK+ER LW+TSMHPDTPLH+SLPLNTAVALP+SLSV R+DLCFVFFA DV RQDTA++VLT+LSKAAGVA+SA+FPAY K+DGS S T + + S+ S + S N P +APLNLDVRW++LT VEFMVN
Sbjct: 106 YTGDISAAEGKPLEPMCLHVYARPATIESFK-DVHGALRDDNTSARHSLSPGLVDEARKQERLLWFTSMHPDTPLHTSLPLNTAVALPISLSVLRRDLCFVFFAEHDVIRQDTAVSVLTELSKAAGVAISASFPAYAKEDGSGSPTRKSGTPSIMSENAASPNPPVGDAPLNLDVRWEQLTTVEFMVN 292
BLAST of mRNA_S-dermatodea_contig8675.16821.1 vs. uniprot
Match: A0A836C8Q0_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Q0_9STRA) HSP 1 Score: 162 bits (410), Expect = 7.270e-44 Identity = 87/179 (48.60%), Postives = 114/179 (63.69%), Query Frame = 1
Query: 28 GKAVEPTCLHVYVRPATIESFKANVQGVWTDDNKVARHSLSPPLVNQARKEERPLWYTSMHPDTPLHSSLPLNTAVALPLSLSVFRKDLCFVFFALDDVNRQDTAMNVLTQLSKAAGVALSAAFPAYEKDDGSHSRTSTAPSKSVESGGSGSSNQPREEAPLNLDVRWDELTDVEFMVN 564
GKA+EP CL Y RPATIE++ + V+ ++ RHSLSP LV QAR+ E PLW+TS HPDTP+H LPLNTAVA+PLSL KD+ VFF++DDV RQ+TA+ +LT LS+AA A +FPA++ D +H + A + + NLD+RWD L D EF+VN
Sbjct: 42 GKALEPVCLRAYARPATIETYGSRVKLGLDHESVSQRHSLSPILVKQARQNEAPLWFTSSHPDTPMHEDLPLNTAVAIPLSLDATHKDMVAVFFSMDDVQRQETALALLTALSRAACTACMRSFPAFDSD-AAHQQPPLA--------------RLEDFTEPNLDMRWDSLQDAEFLVN 205
BLAST of mRNA_S-dermatodea_contig8675.16821.1 vs. uniprot
Match: A0A6H5JUQ3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUQ3_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 2.600e-14 Identity = 51/136 (37.50%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 4 GGDVSATEGKAVEPTCLHVYVRPATIESFKANVQGVWT---DDNKVARHS-LSPPLVNQARKEERPLWYTSMHPDTPLHSSLPLNTAVALPLSLSVFRKD--------LCFVFFALDDVNRQDTAMNVLTQLSKAA 375
G A G V+ C HVY PAT++++ + G+W DD++ +H LSP L QAR E PLW+ S P LH SLP+NTAV LP+ ++V D VF +L R +++ L +SKAA
Sbjct: 67 GSASGAAGGGTVKAHCEHVYTMPATLKTYSGRIMGMWNSGFDDSRAPQHHVLSPQLCEQARASECPLWFKST-PARKLHPSLPINTAVVLPVHVNVDSDDEDKMTDDTYIAVFLSLTLHERNLLSLDFLEHISKAA 201
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Serine/threonine-protein kinase CTR1 |
| Ec32 ortholog | Ec-08_002560.1 |
| Exons | 5 |
| Model size | 566 |
| Cds size | 564 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8675.16821.1 >prot_S-dermatodea_contig8675.16821.1 ID=prot_S-dermatodea_contig8675.16821.1|Name=mRNA_S-dermatodea_contig8675.16821.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=188bp
YGGDVSATEGKAVEPTCLHVYVRPATIESFKANVQGVWTDDNKVARHSLS PPLVNQARKEERPLWYTSMHPDTPLHSSLPLNTAVALPLSLSVFRKDLCF VFFALDDVNRQDTAMNVLTQLSKAAGVALSAAFPAYEKDDGSHSRTSTAP SKSVESGGSGSSNQPREEAPLNLDVRWDELTDVEFMVN back to topmRNA from alignment at S-dermatodea_contig8675:690..7216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig8675.16821.1 ID=mRNA_S-dermatodea_contig8675.16821.1|Name=mRNA_S-dermatodea_contig8675.16821.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6527bp|location=Sequence derived from alignment at S-dermatodea_contig8675:690..7216- (Saccorhiza dermatodea SderLu1190fm monoicous) TACGGTGGCGATGTGAGCGCCACAGAAGGCAAAGCGGTGGAGCCCACGTG
CCTGCACGTGTACGTTAGGCCTGCCACGATCGAGAGCTTCAAGGCGAACG
TGCAGGGGGTATGGACCGACGATAATAAGGTGGCTCGCCACTCCTTGTCC
CCCCCGGTGAGACCCATGCTAATGCACTATTAATAATTATAGAGCTCTAA
TACTAAACCACATGATCCCAATTCTACACTCTGCCTTCTCATATGATACT
ATTATTACTTACAGTATATCATAGCTGGGATCGCCAGCGGTCACATCGGT
CACGGGAGCTGAGGTCGGTTCACACGCGTTATGCATACTGTACATACTGC
ATACAAGTGCTGTACTGTATATGATATCCATGCAGTACAACCAAGTACGT
TTTTGTACATGTTACGAGTATATTTATAAGTAACATGCCGGTACATGCTG
TATCTGGTCTATAGTACAAAACAACGTATTAATACGCGAATGTAACATGC
ATACGCGATGTGGAACAATACACAAATCGCAGGTCAATGAGGTACCTGTA
TCATACTTCTTCTGCACAAGTGATACCCTGCGCTTTTTCCTTCCAATCGC
GACTTCACATATTTTTAGGAAATATTTTATAGAAAACATAATCTATTTCT
GGAGTTGTGGAGCTCGAGTGAACTGAACGCCTGTGATTGGCATCGCATCG
CTCCCTGCTCACTACAACACATGTGCACCTTGTGTGTGTCTTGATAAGCA
TTACATTACCAGGTTCAGCGTAGGGATATACATGTGAACTTGATGGAGTT
TGTTTTTTATAAAACATTTAGTAAAGTATTTTGTAAATATTTTACAGCTA
ATGTAAACATCTTGAGTATCACACAAAATATAGTCCCAAGCCAGGCAGTC
CGTCAATGCTGCTGTTAATACTATTAAGAGCTGTGTTTTTTTTGTGTTTT
TTTTTGCATCAAAGGTTCAACTAACTCTAAACCCTGTCTGTTAGAAAGCT
CTACAAGTTCTAACTGTACAAGTATAGATTATTAGTTTTGTGCTTTGGTA
GGACGTGGTCGCTCAACTCTTAGATCAAGTTATTTGGCGCTCAAGACAAA
CATTGAGTAGTTTGGCTCAAAACAATAAATCAAGTGTTTCTGCCTCTGGC
GGCCCGGTGTGTTTGCGTTGCTCGCTGCCGCCTGCTGCTGGCTGCTACGC
GCTGCTTGCTGCTGTGGGTAGTGTGGTGTGTGCAGCTATGCAGTTGTCCA
GCTGTCTCCAGATGCTGTTTTTAGTCGTATGTTTGTCAGCTCCAGATAGA
TGCTGGGCGTCTCGGGCGAACCGGGGGGCGCGAGCGAAGGCGAGGCGATG
CGATGCGAGGCGAAGCGAGGTGCCATAATCAAAATCACAAAATCGTATGG
GAATTTAGTATACGAAATCGGCCTCAAATCCCTCAATATAATCGGCCTCA
ACAATCGTATCGGAAATAGAGTGGAAAACGCGGACAGAGCGGTATTAATT
AATGAAGTTATTTCCTACAGCACAGCAATGTGTTCAAATGAGTGCCGTGA
CGTTGTTCGTGCGACCTCGGGTGCATTTTCGCAAAACCGGTCGGAGCCAA
TAGATTTAATTTTCGGCGCATTTTTCTCTCTGGCAAAGAGAGTCCCAGGT
CTTGCCGCTCCCTGGATGCAAAAGGCGCAGATTATGTTTGCCCCCCATTT
ATCCTCCTTATTTATCCGACGGCGGTATCAAGTATTATCCGACGGCGGTA
TCAAGTCATCCAGCAGATACGCTCGATCGTCGCCCGAATGCGCGACCGTT
TCACAGATGGATGTGCCCGTGTACAAGCGCGTGGCGCTTGAAAATAGAAA
ATACGACGCCTTGCCCTGCTATTGATATAATAGCTCTATTAGTTCATGAT
ACATGCATACTCAAGCCCTGAGTCGGAACATCGCCCTCCCCCTCCCACGG
TCATTCCCCCATTTGATTGTGTACTCGTGCTTTTCCTTATCTTTACTGCT
TGGCCCCCTGCCGACGGGATCTTTGCGCCCGCCACGTGGCGACTCTTCTT
GACGATCGTAACGTTTTACCTTACCGGCTCGTGCGGGCCGTGCCCTCAGC
TGGTGAACCAGGCGCGCAAGGAGGAGCGGCCGCTGTGGTACACGTCCATG
CACCCGGACACGCCCCTTCACTCAAGCCTGCCGCTCAACACGGCGGTTGC
TCTGCCCCTGAGCCTGTCCGTGTTTCGGAAGGATCTCTGCTTCGTGTTCT
TCGCCCTGGACGACGTCAACGTGAGGATGAAAATTTGCTGCTCTGATGTA
GTGGTGTGTAGGGTTTGGGCGGAGCTGTGTTGTTTTACCTCTGGGGCGTG
AAATGTGGGTGGAGCATGCGCTGCCGTCTACTTTGCCTATCATACCACAT
ATAGCTTCGCTACAGTATATAGCCCTACAGCGGGGCCCCAATCTCACCGA
GTTGTATGTGATGGACATGATCATTATCGACCGTTCCCAACCTTCGCTAC
TGTGGAGATACATATTAATAAATGCTAATGCTGCTCTTGTCAGAAACGTA
AGCTTTTCCATCCACACCCAAGCGACGCCCCTCAAAGTGTTCACTCCCCC
CCTCCGCTGGTTACTGTTACTGGCCGGGGTAAACCCCGCATACCCCTCCG
TAGTTAGGTAGTTAGTCTATGTCCGTTTGGAGACGACATTCGTTCAACAT
GAGTACCCCCCCCCCCACCACCGCCCGTTTTTCTTGTGTGCAATTTCACA
GCGACAGGATACGGCGATGAACGTGTTGACCCAGCTTTCAAAGGCCGCAG
GCGTTGCGCTCTCGGCGGCGTTTCCGGCCTACGAAAAGGATGATGGTAGC
CACTCCAGGACGTCCACGGTGAGCTTGGCTGGATTGATTCTCCAATTTTT
AATTCGTATTGTGGTGCTCATCACTTTTGTAAAGTGCTGGCGGGTAGCGC
TCATGTTGCCGCGTGCGCGTAACAGTGTGTTACAACTCCCGCAGCGCTTG
CCACGTTGCCCGAGTTTGTGTTATACTTGTATGAATTGGAACGCGCCCGT
GAAGTAACCGCGAGAAAGCGCGGTACCTAAGACGACGAGAAAAGACGCGT
GTGCTGAATGCGATCGTGTGTCCAAGCCAGGACCACACCGAAGCCGGACT
CCTCTCTGTCCAGCGATGATTTTGCATGTTTTGTGTATCTCAAATGATCC
CAAGACCTTTCCGGCACGGAAAACGCCGTGATGTTTTTCAAGGAAACCCG
TGCTTTCAGCTGCCAGACTGGTGCCACCGCTACCGAAGTTGCGCCCAAAT
AGAAAAAATAGAAAGCTAAAGTTTGTCGTACGATACCTCCCTTATGTCTC
CTATGTCTGTCCGCTTTCGGCCCTGCTTTTGTTTTTTTTCGCGTGTGTTT
CGCTCGCGCGGTCTTTTGCCGCACGGCTTTGCCGGAACAGGCGCCGAGCA
AGAGCGTGGAGAGCGGAGGCTCCGGTAGCTCAAACCAGCCGCGAGAGGAG
GCCCCGCTCAACTTAGACGTGAGTCCCAGACGCTGTTGTACTGTGGGTGG
GAGTTGTGAGGACTTGCGAGTGTTCATGTTATACTTAGTACTATTATATT
ATAGTATTCTATTACAGCCGGACGTGGGTGGGCGTTGACCCGTTTGGATT
CTGTGTTGGCTTTTTTGGTGGGTCCATCCACCTGCACCGTGTTTCACATG
GAAGAGGTACAGTACAGCACCCCGAACGGCGGCTTGTTCCTCGCCGTACA
TAGGGTTTAATATTAAAATAACATATAATAGTATTAACAGTACATAGTAC
AGTATCAATAGTACACAGTATTAATATTAATAGTACATAGTGGCGGTGGG
AAGGTGAATCCCCTGCCGCGAAGTAGCTACTGTATTAATAGCTGTACGTG
CACCCTCACCGCAATGTACCCGCCGTGACGATGTTGATATTGATCTTGAT
ATTGATATTGATATTGATCTTGATATTGATAATGATATTGATATCGATAT
TGATACTGATGTTGATCTTGATATTCCGCTCAGAACGGATTCAGTACTAA
CGTGTTTTGATATTGCGGAGAAGGTTTGAAAATTCGCAAATACACGTTTT
TCAACCCTCTGAAAAAACGATGTACCAGGTAACATTTTGCATCCCACCGC
ACTCTGCAAGGAAGCAGTGCACATGAAATCCAGTATCATACCAAGAAAAC
TAGGCAAGTTCAACTTGCGGTATCGTAAAATTTAAAATTCATTTCCGGAG
AGTGTCACCGTACCTGTGCCTGGGCGACTTCTAGCTCCATCGGTTCGTTA
TCTACCTTCTGTTTTCAGATCGCTAATGTATTTGAGTAGCGCATGCTTGC
CCATCGAAAAGAGAAAATATCACCTCTTTCCTCGTTTTCTTGGCATTGAT
TATACTTTCTTTAAGTTGCTCCGGGCGGGCCAATTTCTGTACCTAAAACC
GGTCATACCGATGACATACCAATGAGTGCCTAAGGACCCCCCCCCCCCCT
TCCCTGCCCGGCATCTTTGGACCTCGTTGCACTTGAAGCACGACGACTAG
TAATATACAATTACGCCGGGCAGAGAAGGGAAGAGGCGCCTAAGTCACTC
GTCGACAAAACCGGTTTTAGAGCAGTTAGCCCATCCGGAGCCCTTAACGG
TACTCTTTTCGATGGGCAAATCGAGGGCTACGCGCTGCTCAAATACGTTC
GCGATGTGAATATGGAAGGTAGATAACGAACCGTTGGAGCTATACTTGTA
GCATAATTTAGCTTTTAGGTACAAGTACACGTAAGGTGACAACTCTCCGG
ACTTGAATTTGACGATACCGTTTACGATACCGCTATTACTATGTGGAAGT
TACCTCGTTTTATTGGCAATCTTAATGTTTATACTTATAGTGCATTTAAT
GTCGTTTGCCTTGCAGAGTGCTTGGAATGCAAAACTAGTTTCGCCGTTTT
TTCATGTGGTTGAAAGGCGTGTATTTGCGAGTTTTTAGGGCTGAAGCGCC
AATACATTTTTATATCGGATTTTCGGCGTTGCCGATATGCCTATACATTT
CCGATATTTTTTTTTAAATATCGGGAAACCTTGCGGCAGAAAAGGACCGC
CGAGCTGGTTGCCTATTATAGCGTGTTGATTACGAGCGACCAATCGAAAT
ATAGTATACGGGCAGAGCTGGAATCAGTCGACGTTGTAAGCCCGTACGCG
ACAAACGGCCGATATGTTGGTCCAGCCGTCAGCCGATAGATACGATGTAT
CGTATCTTGTGCCTTCATGTGACCACGAGCGGGATCAGAATCCACTTTTG
CAATTGCAAAAATGGCGGGTCGGTCGGTTTTACGTGTGAAACTCAATCAG
TCAATCAATCGATCAATCAATCAAAATCGGCCGATGTAACGTTGTATATC
GGCAACGATACACAGCCCTACGAATTTTCAAACTTCTCCAAAGCGTCAAG
CGGGCGTGTCTGTACGGGTTGGGACTGCATGCCACGGTGTCCGCGTTACC
TGCTTCTCTGTTGTTGTTCGGGGCTCAGGTAGAATTAGAGGGGTGTTAAA
GATGTGACGCTGTTCACGACCTCACGTGACCCACGAGCTAGTGTGCACTT
CATACATGATACATATTATACTATAGTATAAATAGTCGGTACGAAAGGTA
CAGTGCACAGCCGAACCACCGATATAAATGCGCTCACGGTACAGCAGGAA
TTTGTTCTCCTTGTCTGCCTTAGTCTCATCCGCTTCGATGTGTAACATGT
ACAAGTAGCTCTCTTTTTCTCTTGGGTTTTCCCGCAGCCCCCACGTGAGC
GACCGGCACCATTTATTTCCGAACTGAAAGTGCGACCGAATCGTGACATT
GTTAACGCTTTCGTTACTTTGACTTTTGCTACATTTTTCCGGGTCAGCAT
ATCCGCCCGCACCGTATTCCACTCCGACAAGCAACCCAACCGCGACTATT
GTAGTCTTGGCCGTAGCGGCGTTGGATAATCGGCACCGTCCGTGCGTGCC
GTGCGTGCTACGCTTAGCTTCTATAGAATAGGTCGAGTCCCTATATCGGT
CACTAACGCTGTCTGTACTGCTGTCACTACCCGGAAATTCTATCGAACGA
GCCTTTCTCTTCTCCGAATGGGAAAAATGAAACATTGGGTGTTTTGTTTG
TTTTCATTTTTTTTACTTTTGTGAGGAACATTATTTTCCCTGTACAGTAG
TTTTTTCCTCGAATAGAGACAAGTTTTTCTCAGCGTTATTTCTATTTCCT
TTCCTTTTTTTCCCACAAAGTGCACACTGCACATCTACCACAACCACCAC
CTACCACTTGCCACGAACGCACGTGCCCTGTAACTTCTCGTGCACTCGTG
CGCGCAGCGTTCACCTCACATCAAGCCCGTCGTGGCAATTGTCGGGTGAA
AAACGAACTCAGCGTCGAGAGGGACGATACACTTCTCGCGCCTCATTTTC
TGGCTTGCTATTGTGTGTATCGTGTGTATCGGCAGGTGCGATGGGACGAG
CTTACGGACGTGGAGTTCATGGTGAAC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig8675:690..7216- >mRNA_S-dermatodea_contig8675.16821.1 ID=mRNA_S-dermatodea_contig8675.16821.1|Name=mRNA_S-dermatodea_contig8675.16821.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1128bp|location=Sequence derived from alignment at S-dermatodea_contig8675:690..7216- (Saccorhiza dermatodea SderLu1190fm monoicous) TACGGTGGCGATGTGAGCGCCACAGAAGGCAAAGCGGTGGAGCCCACGTG CCTGCACGTGTACGTTAGGCCTGCCACGATCGAGAGCTTCAAGGCGAACG TGCAGGGGGTATGGACCGACGATAATAAGGTGGCTCGCCACTCCTTGTCC CCCCCGTACGGTGGCGATGTGAGCGCCACAGAAGGCAAAGCGGTGGAGCC CACGTGCCTGCACGTGTACGTTAGGCCTGCCACGATCGAGAGCTTCAAGG CGAACGTGCAGGGGGTATGGACCGACGATAATAAGGTGGCTCGCCACTCC TTGTCCCCCCCGCTGGTGAACCAGGCGCGCAAGGAGGAGCGGCCGCTGTG GTACACGTCCATGCACCCGGACACGCCCCTTCACTCAAGCCTGCCGCTCA ACACGGCGGTTGCTCTGCCCCTGAGCCTGTCCGTGTTTCGGAAGGATCTC TGCTTCGTGTTCTTCGCCCTGGACGACGTCAACCTGGTGAACCAGGCGCG CAAGGAGGAGCGGCCGCTGTGGTACACGTCCATGCACCCGGACACGCCCC TTCACTCAAGCCTGCCGCTCAACACGGCGGTTGCTCTGCCCCTGAGCCTG TCCGTGTTTCGGAAGGATCTCTGCTTCGTGTTCTTCGCCCTGGACGACGT CAACCGACAGGATACGGCGATGAACGTGTTGACCCAGCTTTCAAAGGCCG CAGGCGTTGCGCTCTCGGCGGCGTTTCCGGCCTACGAAAAGGATGATGGT AGCCACTCCAGGACGTCCACGCGACAGGATACGGCGATGAACGTGTTGAC CCAGCTTTCAAAGGCCGCAGGCGTTGCGCTCTCGGCGGCGTTTCCGGCCT ACGAAAAGGATGATGGTAGCCACTCCAGGACGTCCACGGCGCCGAGCAAG AGCGTGGAGAGCGGAGGCTCCGGTAGCTCAAACCAGCCGCGAGAGGAGGC CCCGCTCAACTTAGACGCGCCGAGCAAGAGCGTGGAGAGCGGAGGCTCCG GTAGCTCAAACCAGCCGCGAGAGGAGGCCCCGCTCAACTTAGACGTGCGA TGGGACGAGCTTACGGACGTGGAGTTCATGGTGAACGTGCGATGGGACGA GCTTACGGACGTGGAGTTCATGGTGAAC back to top
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