prot_S-dermatodea_contig8671.16814.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8671.16814.1
Unique Nameprot_S-dermatodea_contig8671.16814.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length272
Homology
BLAST of mRNA_S-dermatodea_contig8671.16814.1 vs. uniprot
Match: D7G6W6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W6_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 3.320e-62
Identity = 131/279 (46.95%), Postives = 173/279 (62.01%), Query Frame = 0
Query:    9 VDRQEGHLLPE----EPQADAGLDEPKSAIRSRWSKGQGSWSRAPKDATSGDMERNGMGGGED-AGAGPAIAAVSQEVEGATGVDQ----DTTFAELPA---GGQEE--EGEGVPKPNL-TKKRLKKFFLKDFAGSSWTVGIQWKKRPGKIVTTKVALKEDGTVIWLDKGKGNWKLRTKSRDLVFYRDYFLNWNGKRIYAAKLLDNTCDMYIEGDIKGWGPFMSLNTLGSFQAVRRGIPVDENTPRPPWESRPPLP-VEVEDGKPPPKTEEIFLDVDLE 271
             +R EGH L E    +  + A +D P +A              AP       ++R+   GGE+ AG    +AAV++E +    V Q    +   AEL A   GGQ+E  E +   KP+    KRLKK+F KDF  ++WTV IQW     ++ TTKVALK DG V+WLDKGKG+W LRTKSRD+  YR++FLNW G RI++AKLL+NTCDMY+ G IKGW PF+ L+ +G++QAVRRGI +DENTPRPPWESR  +  V + DG+   K   I +DVDL+
Sbjct:   65 AERPEGHALQEGQEEKASSSASVDTPPAA--------------APASPV---VDRSSAEGGEEKAGLAQNVAAVAKETDATASVGQSAEEEEVMAELLAHQPGGQDEAQEVDAALKPSKRVTKRLKKYFPKDFQDTTWTVAIQWNHSKYEVKTTKVALKADGEVVWLDKGKGSWILRTKSRDISIYRNFFLNWAGMRIFSAKLLNNTCDMYLSGVIKGWQPFLPLSKMGTWQAVRRGITLDENTPRPPWESREVVKEVTMPDGRKR-KNTPIEIDVDLD 325          
BLAST of mRNA_S-dermatodea_contig8671.16814.1 vs. uniprot
Match: A0A835YQD3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQD3_9STRA)

HSP 1 Score: 158 bits (399), Expect = 4.640e-43
Identity = 71/137 (51.82%), Postives = 98/137 (71.53%), Query Frame = 0
Query:  109 PKPNLTKKRLKKFFLKDFAGSSWTVGIQWKKRPGKIVTTKVALKEDGTVIWLDKGKGNWKLRTKSRDLVFYRDYFLNWNGKRIYAAKLLDNTCDMYIEGDIKGWGPFMSLNTLGSFQAVRRGIPVDENTPRPPWESR 245
            P+P    +R+KKFF +DFA S+W V I W  R  K   TKV L++DG V+WLDKGKG+W+L TKSR L FYRD+FL W GKRI++ +LLDN  + Y+EG++KGWGP+  L  +G +QA+R G+ ++++ P P W  R
Sbjct:  165 PEPERKVRRVKKFFARDFANSTWAVAILWGARR-KPQMTKVFLRDDGKVVWLDKGKGSWRLDTKSRSLGFYRDFFLGWKGKRIFSTRLLDNCNEHYLEGEVKGWGPWFPLKWMGQWQAIRLGVDLEKHGPAP-WLQR 299          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8671.16814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6W6_ECTSI3.320e-6246.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQD3_9STRA4.640e-4351.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8671contigS-dermatodea_contig8671:4122..6264 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8671.16814.1mRNA_S-dermatodea_contig8671.16814.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8671 3370..6588 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8671.16814.1 ID=prot_S-dermatodea_contig8671.16814.1|Name=mRNA_S-dermatodea_contig8671.16814.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=272bp
MSPSSLHAVDRQEGHLLPEEPQADAGLDEPKSAIRSRWSKGQGSWSRAPK
DATSGDMERNGMGGGEDAGAGPAIAAVSQEVEGATGVDQDTTFAELPAGG
QEEEGEGVPKPNLTKKRLKKFFLKDFAGSSWTVGIQWKKRPGKIVTTKVA
LKEDGTVIWLDKGKGNWKLRTKSRDLVFYRDYFLNWNGKRIYAAKLLDNT
CDMYIEGDIKGWGPFMSLNTLGSFQAVRRGIPVDENTPRPPWESRPPLPV
EVEDGKPPPKTEEIFLDVDLE*
back to top