|
|
Homology
BLAST of mRNA_S-dermatodea_contig8669.16810.1 vs. uniprot
Match: D8LCZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ2_ECTSI) HSP 1 Score: 151 bits (382), Expect = 2.540e-41 Identity = 75/87 (86.21%), Postives = 81/87 (93.10%), Query Frame = 1
Query: 1 VKEAEDFRKQANKCLQKTMTRWNPNYFSAAPLFEKAAACYRAAGEDDKATAMFMQAGECQCHDSVMAHASAAKDFREAALITERQER 261
VKEAE++ KQANK L KT+TRWNP++FSAAPLFEKA ACYRAAGED KATAMFMQAG+CQCHDSVMAHASAAKDFREAALITERQ R
Sbjct: 66 VKEAEEYLKQANKMLTKTLTRWNPDFFSAAPLFEKAGACYRAAGEDGKATAMFMQAGDCQCHDSVMAHASAAKDFREAALITERQGR 152
BLAST of mRNA_S-dermatodea_contig8669.16810.1 vs. uniprot
Match: A0A836CBL3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL3_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.070e-11 Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 1
Query: 10 AEDFRKQANKCLQKTMTRWNPNYFSAAPLFEKAAACYRAAGEDDKATAMFMQAGECQCHDSVMAHASAAKDFREAALI 243
A++ R A K + KT +W ++F+AAPLFE+AAA YRA G+++ A + QAGECQ D A AA+D+REAA +
Sbjct: 79 ADEARAAAAKLITKTWKQWTCDFFAAAPLFERAAAAYRACGQEEAALMAYAQAGECQ--DENAAWPLAARDYREAAQL 154
BLAST of mRNA_S-dermatodea_contig8669.16810.1 vs. uniprot
Match: A0A8K1CI65_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI65_PYTOL) HSP 1 Score: 65.9 bits (159), Expect = 1.260e-10 Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 1
Query: 4 KEAEDFRKQANKCLQKTMTRWNPNYFSAAPLFEKAAACYRAAGEDDKATAMFMQAGECQ 180
KEA++ KQANK ++KTM RW P+Y +AAPL EKAA YRAAG+ ++A A + QA Q
Sbjct: 10 KEADEHMKQANKLMEKTMFRWQPDYLAAAPLIEKAADAYRAAGDYERAKAAYAQAALVQ 68
BLAST of mRNA_S-dermatodea_contig8669.16810.1 vs. uniprot
Match: K3WP17_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP17_GLOUD) HSP 1 Score: 65.1 bits (157), Expect = 2.390e-10 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 4 KEAEDFRKQANKCLQKTMTRWNPNYFSAAPLFEKAAACYRAAGEDDKATAMFMQAGECQCHDSVMAHASAAKDFREAALITERQE 258
KEAE+ +QA+KCL KT+ RW P+Y +AAPL EKAA +RAAG+ D A +F Q + Q + A+ A++ ++ + +E
Sbjct: 10 KEAEENLRQADKCLAKTVFRWAPDYLAAAPLLEKAADAFRAAGDFDAAKRVFAQVADVQLKNKSSYRAAQAQENVAKVVVQQMRE 94
BLAST of mRNA_S-dermatodea_contig8669.16810.1 vs. uniprot
Match: A0A668A007_9TELE (Gamma-soluble NSF attachment protein-like n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A668A007_9TELE) HSP 1 Score: 51.2 bits (121), Expect = 1.700e-5 Identity = 26/81 (32.10%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 1 VKEAEDFRKQANKCLQKTMTRWNPNYFSAAPLFEKAAACYRAAGEDDKATAMFMQAGECQCHDSVMAHASAAKDFREAALI 243
+ EA + +A KCL+ ++T+W P+Y SAA + KAA C++ A + D+A +++ E + + H AAK +A ++
Sbjct: 6 INEAHEHITKAEKCLKTSLTKWKPDYDSAASEYAKAAVCFKNAKQFDQAKDAYLKEAEYHTENKALFH--AAKAIEQAGMM 84
BLAST of mRNA_S-dermatodea_contig8669.16810.1 vs. uniprot
Match: A0A3B3H4A7_ORYLA (NSF attachment protein gamma n=145 Tax=Acanthomorphata TaxID=123368 RepID=A0A3B3H4A7_ORYLA) HSP 1 Score: 49.3 bits (116), Expect = 8.180e-5 Identity = 25/81 (30.86%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 1 VKEAEDFRKQANKCLQKTMTRWNPNYFSAAPLFEKAAACYRAAGEDDKATAMFMQAGECQCHDSVMAHASAAKDFREAALI 243
+ EA + +A KCL+ +MT+W P++ SAA + KAA C++ A + ++A +++ E + + H AAK +A ++
Sbjct: 6 INEAHEHIAKAEKCLKTSMTKWKPDFDSAASEYAKAAVCFKNAKQYEQAKDAYLKEAEYHTENKTLFH--AAKAIEQAGMM 84
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 155.2 |
| Seed ortholog evalue | 1.4e-35 |
| Seed eggNOG ortholog | 2880.D8LCZ2 |
| EggNOG OGs | 2CYY4@1,2S769@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 266 |
| Cds size | 264 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8669.16810.1 >prot_S-dermatodea_contig8669.16810.1 ID=prot_S-dermatodea_contig8669.16810.1|Name=mRNA_S-dermatodea_contig8669.16810.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=88bp
VKEAEDFRKQANKCLQKTMTRWNPNYFSAAPLFEKAAACYRAAGEDDKAT AMFMQAGECQCHDSVMAHASAAKDFREAALITERQER* back to topmRNA from alignment at S-dermatodea_contig8669:1090..7957- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig8669.16810.1 ID=mRNA_S-dermatodea_contig8669.16810.1|Name=mRNA_S-dermatodea_contig8669.16810.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6868bp|location=Sequence derived from alignment at S-dermatodea_contig8669:1090..7957- (Saccorhiza dermatodea SderLu1190fm monoicous) GTCAAGGAGGCCGAAGACTTTCGGAAGCAGGCGAACAAGTGTCTGCAGAA
GACCATGACGCGATGGAACCCGAACTACTTCAGCGCCGCTCCTTTGTTTG
AGAAGGTGAGCTTTCCGTGACACCCCCGGCCTTCGAGAGGATGGCCTTAT
CCCTTGGGTGTCGCCTGGCTCATGTGCTCGATCTAGTGTGTAAAGCATGT
GATGCCCTCGCCCGCCGAGAGGATGGCGTTATCTCTTGGGTGTGACGGCG
TTTTTTTCATTTGCTCGATTATCGTTTACAACATATGATACTTCAAGTAC
GTTATTATTAGTCTTCACCTTGCTGATGATGGTTTGGTTGGTTGATTGTA
ATAGTACACGCACAAGCCGATCGGCTTCATCAATCCGACCCGACTTGTGG
TCAGATGTTTGTAGCAAAGAGTCTTGGGAAGATACTGAAACATAGCAAAC
AAAAATCTGCTTTGAAACAAATACGGCAATTCTCTCCCTGGTACTGTACA
AGTACTATTAATAGTATGATGCTTACCATACCATGGCACAAAAGAGAAGT
AGTGTTTGAGAGAGGTGGTCCAGTGTACCTTGTAGTTAGCCTTGCCCGAG
GCGCTTTTGGCTGCTGTACTTCAATTGTTGTTCTTCCCGTCAAGACAATG
AATATACTCTAACTTAATGTAATTAATATACTCTAACTAAATGTAATTAA
TACCAGTATTAATTAAGTTAATGTTCACGGCGAGAGGCTCCTGTAGAGCA
GGCGCCCGTCGCGGATCCATTTTTTATTTGTATAGCTACTGTAGACTTAA
GTCAGTAGTGCTTGTATATCATACTTGTATGCTTGTATTATACGTGTCTG
CCGGATGGAAAATTGCGGAGGAAGTCGCCCCCATCTACTGCTACTGCTCT
AAAAGTACTGTCGGACGATAACTGGTGCAGAGGACGTGCGCGTGTGCTGT
GTCCCGTGTGGCAGAACTGCTCACAGTATCCTGTGGACGCAGGAGAAGAC
TTATACGCAGTGTCCTGGTAGGTTCTGCAGTATATCTGCAAGGCGGAGAT
TACAGTGTACTGGTACCTGGTACGTGTTAGTGTTAGTGTTAGTGTAATTT
GGGGCATGCAATCAGGTACACAACCTACACGTGTATCGTTGAAATCGGTA
TATACAATCACTGATTGTACCTGTAAATACACGCGTAAGTTTGAAACCAG
TAGAACCAGGTACGCTCTTGCTGTACGCTCGTAAAGTGCACAGGTTACCC
GTCTACACTATTTTATTAATAGTACACTACAATCTACACATTTTGGAAGA
AGTGTCTCCATATAATAATCCATTCTGCTGTGAGCTGTCTTGTGAATTAA
GCAGATAAAGCCGTTTTGAACCGAGCCCGTTTTCCGCTCGAATATCGCTT
AATGTGTCGCTTGTATGGAGTTACTAATATAATATACTACTGTATAATAC
AATAGTACGTAAACACGCATGCTGCGGTTATGGCTATTTTACACGCACAA
CCAAATTGCACGCAACCTTAATTTTAATCATGCCTGATCCTTCCAACAAG
TAGCGTGGCTTAGGTCCCCTATAAATAATACATACCATGGTACATCGTGG
AAAAAGCAAAGCGGCTGGAGAACACTATAACAATATGTGTAAGGCAGCAC
CTCTCATATTGTTCCCAAGAACACCAGCCCGTCGATTGGAACGATGATGA
TTATCCCAATCCGGCCACCGCACACTGCCGTTTTCTTTTTCAAAATGGTT
GTGAGCAGCGGCGGCGGCGCGGTCCACATGAGCGGTTGAAGTGCGCGGCT
ACTGTACCTGACAGACGATATACGATATAGGGTGTTTTCTGCATGTGCAG
CCCGCGCAGACTCGGGCAAGCTGTATGTATGTAACAGCCCTCAAGTGAAG
CCTGCGTTCTATTCAGTCAGCAGTATATGCTGCAAGTGTTGGGTAAACTT
AGCGTGCGATGTGAGAAGTGCCATGGACGAGCGATGTGAGATATCGAACT
GCCGCTTCTGGCAACGACAACGACAGCAGTGTTTGCTGCCGCATCTAATG
TGGTATTGTGGTATCACAAGTTGTAATTTCGTGCCGCCACCTCGACGCAC
CACCCATTGTACAACAAAATGTTGAGCCGAATTTTTTTATTATTATTACA
TTAGTGGGGCGAAAAATCCCACCCTTTGCAACACTTGCTTATATTATACT
GTAACTCAACACCGCCCGCCCCCTCTGAAACACGACGACTTTTGGCATCA
ATCAATCTGCATCAAAGGAGAAGTCTACATCGCTAATAAATTACGAATTA
CTATTGAAACCCGTTCAAAGCGGTACTAAGTATAATAATATAGATTTACA
AGCTAATACCTAATAATATCATGCCAAACCTCGTCGAAAAATCGGGTCCA
TGTTTGCTTTCCCACGCGCGCGCTCGCGCGCGCGCACGCCTATGCGAACG
TTAGGACACAACTAATCGCCGCATGTTCACAGCCTCGACCTTGCGACAAT
TCAGTACAAGAAGCGCCCCCCCCGCCGCCCCGGCGGCGCTGCGGACGTCC
TTCAGAAGGGGATGCCCCCTGAAATCCCCGAACGGCTTTGGTCGTGTGAC
TCTCTTGCCTTATGTATCATATGGCTTGCTTGTTATGTTGGGTACCTGGT
ACACTTTTTTGGACATTTGGTCCTCATTATAATTATGATACTGTCTATCT
CCGTCATAGCGACCTGGCTTGTTTACGGCTGCCCCTTTTGGCCCGGAAGA
TTTGCCAGGAAAATCAAATGCCACGGGCAGCGGGGCGGGAGCGAAATACC
GCAGAAGTAGTAGTTATAGTAGAAAGGGAGGACCTATGCGCAGGAGGAGA
AGGATGGATATTTTGTTGCGAAGTCGCGGCGATGGGGCTGACCTCAAAGG
GTCGAACAATTATGTATAATTCCCTACGAGAAAGGGGAGTAACACCATTA
CAGCGTTAATAGTATGACGCAAGACACGTAAAAAGGCAAACAATTGCACT
TCTGTATGTATTCTCCATATCGTGGGAGGTATGATACGCTGCGTGATCTT
CCCTGGGAGAGGAGAGTACACCAACATTATTACGAGTCCAAACGTCAATA
GACCCACACCATGCTGCCGAGCTACATTTTTCTTTCAGCAGGCGGGGGGA
GGCTGTTCTGTGTTGCGCGGGTGCTGCTTCAGGCTCTCGTGTGTTGCTGT
TTGCTGTTTGCTGCGCATGCAGCCGCAAATTATTCGGATTAGTTAGCAGC
TTGGCGAGCGCGCGCTCTGTATCATAGGGCCACATAGGACCCCATACATA
GTCTAATGCAATACGAACAAGAGAGAAACAGACCCCCAGCGGCCAGCAGC
TCTGCTATGGTGGGGGAGTAAAGAGCGCGCTCCTTCACTCCCTGCACCCC
TGTCTCTTGCTACGCCGGGGAGCCCGAATCGATGCTGTTGGGGATACAGG
GCGGGAGGAGGTTGTTGTTGGGCGGGTGCTACTTGTGTTTAGCTGTTTCC
TGCGTAGGCGTGCTCGGCGCCGACTGGAGGGGTTTCATCCACGGCGAAGA
GTCGGTTGGACCTCACACACAGCAGGAGTGCAGCCCGCTGCAACCGCAAC
ATGCGCAGAAAGTCGGTCGTGCTGCGTGCAGTAGGTCCTGTCATGTCCCC
CTCGTTGCCGGGAGAGGCGCGTGTGTCGGTGTTTTCAGATCGATGCCGCG
GACGGAATAATTTCGTGTGAAAAAATATGCGGAGCAATTAGCGACTTCGC
AGGCGCGCGTGGAGCATGGGCTCGAAGTCTCCCACAACGATGAAGACGGA
ACAGTGACAGCGGAATCCTCTTGAACGCAAAGAGCATAGCACCACGACAG
CAATGAACAGTTCATATCGTAGCGGACGTTGTGGACAGTCGGCCGCGGGG
CAGCGTGTGTCGGGCCGAATTCGCGGGGGAACCAAAATTTTGCCCGACGC
TACTGGCGCGCTGCTTTTTTAAGTAAAGAGACGGCACAAGCGATCAAGCA
ATCGCGTTTTTGTACAGCCGTTATTTCAATTAGGGAGGAGCTAAAGCAAA
TGTTGCTAACGAACACTGAGAATTTTATATCCTTCACAAGATGTAACCCC
ACGGGGGGTTTTGACCTGCACCGCCGATGACGCCTCCTCACGTGTGAAGC
CGGTTTGCGCGCTTCAACCCTTTCGGAACTTGAGGACGTTTCTCATCGAA
TATTATCACAGCCGGTATATTGCGGTGGCGGCTACGATACACACACGCGC
AAGCGTAACCGTACAAGCGAGCTATTATACGCGTGGCAGGGTTATGCTCG
CTTTTCCACCGCCACTTTCATACTATGATACGGAGAATGAAGAGTTACCG
TTCGGGTACTGTACCTGTATAGTATAGTATAGTATAGTAGAAGTATATGG
TTGCCACCGTTCGGGTACTATACTATTATATTAATAATGTACTGTTAGTA
CTGTACCTATTGTATGTGAAACACGGTGCTGGCAGATAGATAGATAGATA
GATAGATAGATAGCCTAACCCCGAAAACGGACGCAGAGTTCCCAAAGGGT
TAGTGGAAAAGAATACAGGGGAAGTAGGGTGGGGGGGGGGAACCGAATGT
TGTATCGAACACTGGGAACTGGCACCAATAGTTCCTCGTCGTCGTTCAGC
CAGCGGGAACAAACGTGCAAAGCGCTGTTAATTAGTAAAACAATCGAGGT
GTCTTCCCCCGCAGCGCGCGCTCGTGTGCAACGTGTGGGTGATGCCGACT
TCCGACTATATCCCGGAGCGTGTACGTGAGTCAGCCAGCACGGACACCTT
CATCCCTAATATAATAAGGAAAGTTGGAGCTTCTCAACCTTGTCAGGCGT
GTCTTCGCTCCACCAACCCAACGCTGTCCTCCGTGCGGTATTGTGTCGGG
CGTCCTGCCACTGAAACAACAAAATATGTATCATACCAGGGATAAAATAG
TATAGCCTTGAACGGTTTTTAATAGTAATTTAATAGCGATTTAGAGTTCT
CCTTTGGTGCAGAACAGTTGCCAAAAATCACGGTGATTTCATAGGGGCCC
TAATAAACAGTTGTTGAAAAATAGTAGCATTTGTCACCTCACGGCCGTGG
CTACTGTACGTATTACTGTAGTGTTAATAATACAGAGAGCGAGCGTTAGG
GTACATTGTTTTTGTAGAGGAAAAGAAGGCCCAAGCTAACTCAACTCAGA
AGAGATCTACGTTACGTATGATGCCGTGGGGTCACTGTAGGAGTGGTACA
ATTTGTGTAGGAGTGTGATACTATTAATACAATACAGTACAGTACAGTAC
AATTAAAACGTGACTCTGCGAATGGAATGTTCTCATTTGTGGGATTTTGT
GTGTGTGTGTGTGGGAATCCATTTGTTAGCGAAACCCTTCTGCTCATCGT
TGCTTGTCGGCTATACGCTATACACTATACACTATACACCCGCGTATTGT
GCAATAGTGATGCAATGGCCGCCCAATACAAATGAGATCCTCGTACTCGC
AGTTGATTTGATTTTGATTTTTGATTTGATTTGCACACGTCTAGCCGATC
GGCATAATCCGACATACCCGACTTGTGGTCAGACACGCAAAGAGTCAAGG
AGAAAAATAACTAATCAGAATTCTACTTCTAATAGTACTGGTCGACGTCG
TACCCCCCCAAAAAATATACCAGTAAATATATAATGGTTTCGAAAACATA
GAGCTATTACTGTACTAGCGTTGGGGTACTGTCCCACCGTTTCCAAAGGG
AAGATGACCCAAGCCACACCTATGGAGGCTCATTTGTTACATACAGTATG
ATGCTATGGTTTCGTGTCATGTATTGTATGATGTTACATTATATGGTTAT
GATGCAAGTGTCTGTCCTGAGCGATATCCTGGTAATGTGTAGTGTATCTT
TGGTATTGCTTTTGTGAGCCAAGAAATATTTTTTTCTACCATGTACTTTG
TCACGTTGATTTTTTCTTTCGTTTTGGTGGCCCCCCACCCCTGCCTGAAA
CAAGAAGGCATTTCAAAAACATGAGAGCGAGCGTTGGGGTGAAGCATTTA
TTGAAGGGAAGACACAACTGATCATGGTCGAAGCTACACCTACACCTATG
AAGCTACATCTGTCGAGGTTTGCGTTGCGTGTGATGCTATTAGACGGTTT
ACGTTGATATAGACAGTATTTGGAGTATGGGATTCTTGCGGAAATGTGTC
TTTTCTCTGGGCGTGTCGTATTAATTTCTCAAATGGTGCAAAGGTGTGTA
GATTGTAGTGTACTACTATTACTGTACACGCGTGTAACCCGTGTACTTTA
CTAGTAGTATTAATAGTGTACAACAGTGTACTTGTACACGGTGAATTATA
AGTGTATCTGGTTGTACTAGTTTCAAAATTACGCGTGTATTTAAATCTAC
AATGAGTGATTGTATACTATATACCGGGTTCAAAGATACACGTGTAGGCT
GTGTACCTGAGTGTATACATACCCCAGCCCCGAATTAGACGTACACGTAC
ACTTAGACTTGCACTTACACGTACACTTACACTTAGACGTACACTTGCAC
TTACACTTAGACGTACACTTATACTTACACTTAAACTTACACTACACTAC
AATCTCCGCCTTTGACATATAGTGTGCCTCCCCCGTCCCCCGTTCCCCGT
CCGCGCCCCCCCCCCCTCCCCCCATCCGCCCTGATAACGCCTCATGCTGT
GGTTGCTAGGCTGCGGCATGCTACCGTGCTGCCGGAGAGGACGACAAGGC
GACGGCAATGTTCATGCAAGCGGGGGAGTGCCAGTGCCACGACTCCGTGA
TGGCACACGCTTCCGCCGCGAAAGACTTCAGGGAGGCCGCGCTCATCACC
GAGCGGCAGGAGCGGTGA back to topCoding sequence (CDS) from alignment at S-dermatodea_contig8669:1090..7957- >mRNA_S-dermatodea_contig8669.16810.1 ID=mRNA_S-dermatodea_contig8669.16810.1|Name=mRNA_S-dermatodea_contig8669.16810.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=528bp|location=Sequence derived from alignment at S-dermatodea_contig8669:1090..7957- (Saccorhiza dermatodea SderLu1190fm monoicous) GTCAAGGAGGCCGAAGACTTTCGGAAGCAGGCGAACAAGTGTCTGCAGAA GACCATGACGCGATGGAACCCGAACTACTTCAGCGCCGCTCCTTTGTTTG AGAAGGTCAAGGAGGCCGAAGACTTTCGGAAGCAGGCGAACAAGTGTCTG CAGAAGACCATGACGCGATGGAACCCGAACTACTTCAGCGCCGCTCCTTT GTTTGAGAAGGCTGCGGCATGCTACCGTGCTGCCGGAGAGGACGACAAGG CGACGGCAATGTTCATGCAAGCGGGGGAGTGCCAGTGCCACGACTCCGTG ATGGCACACGCTTCCGCCGCGAAAGACTTCAGGGAGGCCGCGCTCATCAC CGAGCGGCAGGAGCGGTGAGCTGCGGCATGCTACCGTGCTGCCGGAGAGG ACGACAAGGCGACGGCAATGTTCATGCAAGCGGGGGAGTGCCAGTGCCAC GACTCCGTGATGGCACACGCTTCCGCCGCGAAAGACTTCAGGGAGGCCGC GCTCATCACCGAGCGGCAGGAGCGGTGA back to top
|