prot_S-dermatodea_contig86590.16805.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig86590.16805.1
Unique Nameprot_S-dermatodea_contig86590.16805.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length50
Homology
BLAST of mRNA_S-dermatodea_contig86590.16805.1 vs. uniprot
Match: D8LNT5_ECTSI (Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNT5_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.670e-20
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
Query:    1 SHLSLSQILDLYEAGKKFYLYTGRGPSSDALHLGHLVPFHFTKYLQ 46
            SH  L+QILDLYEAGKKF+LYTGRGPSSDALHLGHLVPFHFTKYLQ
Sbjct:  269 SHRDLTQILDLYEAGKKFFLYTGRGPSSDALHLGHLVPFHFTKYLQ 314          
BLAST of mRNA_S-dermatodea_contig86590.16805.1 vs. uniprot
Match: A0A482RU04_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU04_9ARCH)

HSP 1 Score: 83.6 bits (205), Expect = 8.100e-19
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    1 SHLSLSQILDLYEAGKKFYLYTGRGPSSDALHLGHLVPFHFTKYLQ 46
            SH  L Q+LDLYEAG+KFYLYTGRGPSS+ALHLGHL+PF FTK+LQ
Sbjct:  130 SHRDLHQLLDLYEAGQKFYLYTGRGPSSEALHLGHLIPFQFTKWLQ 175          
BLAST of mRNA_S-dermatodea_contig86590.16805.1 vs. uniprot
Match: A0A7S3YIG7_HETAK (Tryptophan--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIG7_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 2.500e-18
Identity = 37/46 (80.43%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    1 SHLSLSQILDLYEAGKKFYLYTGRGPSSDALHLGHLVPFHFTKYLQ 46
            SH  L+Q+LDLYE G+KFYLYTGRGPSS+ALHLGHL+PFHFT+YLQ
Sbjct:   31 SHRDLTQLLDLYERGEKFYLYTGRGPSSEALHLGHLLPFHFTQYLQ 76          
BLAST of mRNA_S-dermatodea_contig86590.16805.1 vs. uniprot
Match: W7TK77_9STRA (Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK77_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.510e-18
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    1 SHLSLSQILDLYEAGKKFYLYTGRGPSSDALHLGHLVPFHFTKYLQ 46
            SH  L+Q+LDLYE G KFYLYTGRGPSS++LHLGHL+PFHFT+YLQ
Sbjct:  274 SHRDLTQLLDLYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRYLQ 319          
BLAST of mRNA_S-dermatodea_contig86590.16805.1 vs. uniprot
Match: A0A4D9CRR7_9STRA (Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRR7_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.550e-18
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    1 SHLSLSQILDLYEAGKKFYLYTGRGPSSDALHLGHLVPFHFTKYLQ 46
            SH  L+Q+LDLYE G KFYLYTGRGPSS++LHLGHL+PFHFT+YLQ
Sbjct:  274 SHRDLTQLLDLYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRYLQ 319          
BLAST of mRNA_S-dermatodea_contig86590.16805.1 vs. uniprot
Match: A0A7S1XAY3_9RHOD (Tryptophan--tRNA ligase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XAY3_9RHOD)

HSP 1 Score: 83.6 bits (205), Expect = 1.220e-17
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 0
Query:    1 SHLSLSQILDLYEAGKKFYLYTGRGPSSDALHLGHLVPFHFTKYLQ 46
            SH  L  +LDLYEAG+KFYLYTGRGPSS+ALHLGHL+PF FTKYLQ
Sbjct:   75 SHRDLEMVLDLYEAGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQ 120          
BLAST of mRNA_S-dermatodea_contig86590.16805.1 vs. uniprot
Match: H8ZX36_9EUKA (Tryptophanyl-tRNA synthetase (Fragment) n=1 Tax=Collodictyon triciliatum TaxID=190325 RepID=H8ZX36_9EUKA)

HSP 1 Score: 77.4 bits (189), Expect = 1.920e-17
Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    1 SHLSLSQILDLYEAGKKFYLYTGRGPSSDALHLGHLVPFHFTKYLQ 46
            SH  +++ILDLYE GK FYLYTGRGPSS+++H GHL+PF FTKYLQ
Sbjct:    8 SHREMNRILDLYEKGKPFYLYTGRGPSSESMHFGHLIPFLFTKYLQ 53          
BLAST of mRNA_S-dermatodea_contig86590.16805.1 vs. uniprot
Match: A0A7S0XFQ6_9STRA (Tryptophan--tRNA ligase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XFQ6_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.030e-17
Identity = 37/46 (80.43%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    1 SHLSLSQILDLYEAGKKFYLYTGRGPSSDALHLGHLVPFHFTKYLQ 46
            SH  L+Q+LDLYE+GKKFYLYTGRGPSS+ALHLGH+VPF FTK+LQ
Sbjct:  149 SHRDLNQLLDLYESGKKFYLYTGRGPSSEALHLGHMVPFLFTKWLQ 194          
BLAST of mRNA_S-dermatodea_contig86590.16805.1 vs. uniprot
Match: A0A453K2F4_AEGTS (Tryptophan--tRNA ligase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453K2F4_AEGTS)

HSP 1 Score: 80.9 bits (198), Expect = 2.230e-17
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 0
Query:    1 SHLSLSQILDLYEAGKKFYLYTGRGPSSDALHLGHLVPFHFTKYLQ 46
            +H  L++ILD+YE G KFYLYTGRGPSS+ALHLGHLVPF FTKYLQ
Sbjct:   71 AHRDLNEILDIYEKGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQ 116          
BLAST of mRNA_S-dermatodea_contig86590.16805.1 vs. uniprot
Match: Q2QP61_ORYSJ (Tryptophan--tRNA ligase n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q2QP61_ORYSJ)

HSP 1 Score: 82.0 bits (201), Expect = 2.980e-17
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    1 SHLSLSQILDLYEAGKKFYLYTGRGPSSDALHLGHLVPFHFTKYLQ 46
            +H  L++ILDLYE G+KFYLYTGRGPSS+ALHLGHL+PF FTKYLQ
Sbjct:   78 AHRDLNEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQ 123          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig86590.16805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNT5_ECTSI1.670e-2091.30Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A482RU04_9ARCH8.100e-1980.43Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3YIG7_HETAK2.500e-1880.43Tryptophan--tRNA ligase n=1 Tax=Heterosigma akashi... [more]
W7TK77_9STRA8.510e-1878.26Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CRR7_9STRA8.550e-1878.26Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis sa... [more]
A0A7S1XAY3_9RHOD1.220e-1780.43Tryptophan--tRNA ligase n=1 Tax=Compsopogon caerul... [more]
H8ZX36_9EUKA1.920e-1771.74Tryptophanyl-tRNA synthetase (Fragment) n=1 Tax=Co... [more]
A0A7S0XFQ6_9STRA2.030e-1780.43Tryptophan--tRNA ligase (Fragment) n=1 Tax=Chromul... [more]
A0A453K2F4_AEGTS2.230e-1778.26Tryptophan--tRNA ligase n=1 Tax=Aegilops tauschii ... [more]
Q2QP61_ORYSJ2.980e-1778.26Tryptophan--tRNA ligase n=2 Tax=Oryza sativa subsp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..49
e-value: 4.0E-19
score: 70.9
NoneNo IPR availablePANTHERPTHR10055:SF1TRYPTOPHAN--TRNA LIGASE, CYTOPLASMICcoord: 1..47
NoneNo IPR availablePANTHERPTHR10055TRYPTOPHANYL-TRNA SYNTHETASEcoord: 1..47
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 7..48
IPR001412Aminoacyl-tRNA synthetase, class I, conserved sitePROSITEPS00178AA_TRNA_LIGASE_Icoord: 26..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig86590contigS-dermatodea_contig86590:110..259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig86590.16805.1mRNA_S-dermatodea_contig86590.16805.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig86590 110..259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig86590.16805.1 ID=prot_S-dermatodea_contig86590.16805.1|Name=mRNA_S-dermatodea_contig86590.16805.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=50bp
SHLSLSQILDLYEAGKKFYLYTGRGPSSDALHLGHLVPFHFTKYLQVHY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR001412aa-tRNA-synth_I_CS