prot_S-dermatodea_contig8650.16800.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8650.16800.1
Unique Nameprot_S-dermatodea_contig8650.16800.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length207
Homology
BLAST of mRNA_S-dermatodea_contig8650.16800.1 vs. uniprot
Match: A0A6H5LL23_9PHAE (GT20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL23_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.330e-29
Identity = 100/233 (42.92%), Postives = 117/233 (50.21%), Query Frame = 0
Query:    1 MVLSRLGW---ASSLPGTLPAGDSIGDVRGVAGDRTKRFCLCVGDDVSDEDMFIAVKSYEASTRTSGNDCSGGGDAAPTLSMRSGKGS------------LSTGS-----FGEPPRQQS------LLTVTVGRKASDADSWLPGVDAVVSLLRTLVRAPSRRETAQLSKFAPHLA----SSMNHMHLFQGGRDPDSPTRSIRASSA-----------GSAASIRGFMGTVAEG 192
            MVL RLGW    SS P    A D+       A     RFCLCVGDDVSDE+MF+AVKSYE    TS    S G  A+P  ++    GS            L TG        EP   Q+      L TVTVG K SDAD+WLPGV AVVSLLR L R  SR  TAQ S  AP  A    S+   +   +G   P SPTRS+R++SA           G+AA    FM + A+G
Sbjct:  240 MVLDRLGWPSEVSSFPAPADATDTDAPAT-TASSAGGRFCLCVGDDVSDEEMFVAVKSYEG-VATSKGQRSVGTSASPASALLHTDGSGAEAAPASIPPVLPTGKENMTPAAEPGHHQAMQPQTHLFTVTVGSKPSDADAWLPGVSAVVSLLRILGRVTSRHGTAQRSMLAPRAAAVGISNSPMLEPHRGMTQPVSPTRSVRSASASNADDADATASGTAAKNHSFMASFADG 470          
BLAST of mRNA_S-dermatodea_contig8650.16800.1 vs. uniprot
Match: D7G011_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G011_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 4.350e-27
Identity = 95/217 (43.78%), Postives = 108/217 (49.77%), Query Frame = 0
Query:    1 MVLSRLGW---ASSLPGTLPAGDSIGDVRGVAGDRTKRFCLCVGDDVSDEDMFIAVKSYEASTRTSGNDCSGGGDAAPTLSM--RSGKGS-----------LSTGSFGEPPRQQS------------------LLTVTVGRKASDADSWLPGVDAVVSLLRTLVRAPSRRETAQLSKFAPHLA----SSMNHMHLFQGGRDPDSPTRSIRASSAGSA 179
            MVL RLGW    SS P    A D+   V   A     RFCLCVGDDVSDE+MFIAVKSYE    TS   CS G  A+P  +     G G+           L TG     P  +S                  L TVTVG K SDAD+WLPGV AVVSLLR L R  SR  TAQ S  AP  A    S+   +   +G     SPTRS R++SA +A
Sbjct:  945 MVLDRLGWPSEVSSFPAPADATDTDAAVS-TASSAGGRFCLCVGDDVSDEEMFIAVKSYEG-VATSKGQCSVGPSASPASAPFHTDGPGAEAAPAFTPPSVLPTGKENVTPAAESGRHQAMQXXXXXXXXQTHLFTVTVGSKPSDADAWLPGVTAVVSLLRILGRVTSRHGTAQRSMLAPRAAAVGISNSPMLEPHRGMTQSVSPTRSFRSASASNA 1159          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8650.16800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LL23_9PHAE3.330e-2942.92GT20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G011_ECTSI4.350e-2743.78Trehalose 6-phosphate synthase, family GT20 / Treh... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003337Trehalose-phosphatasePFAMPF02358Trehalose_PPasecoord: 31..57
e-value: 2.3E-4
score: 20.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8650contigS-dermatodea_contig8650:5137..7572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8650.16800.1mRNA_S-dermatodea_contig8650.16800.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8650 5137..7599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8650.16800.1 ID=prot_S-dermatodea_contig8650.16800.1|Name=mRNA_S-dermatodea_contig8650.16800.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=207bp
MVLSRLGWASSLPGTLPAGDSIGDVRGVAGDRTKRFCLCVGDDVSDEDMF
IAVKSYEASTRTSGNDCSGGGDAAPTLSMRSGKGSLSTGSFGEPPRQQSL
LTVTVGRKASDADSWLPGVDAVVSLLRTLVRAPSRRETAQLSKFAPHLAS
SMNHMHLFQGGRDPDSPTRSIRASSAGSAASIRGFMGTVAEGNAGGGACE
AGMRAMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003337Trehalose_PPase