prot_S-dermatodea_contig8643.16794.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8643.16794.1
Unique Nameprot_S-dermatodea_contig8643.16794.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length122
Homology
BLAST of mRNA_S-dermatodea_contig8643.16794.1 vs. uniprot
Match: D8LSU0_ECTSI (Similar to helicase, lymphoid-specific isoform 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU0_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 3.240e-41
Identity = 87/127 (68.50%), Postives = 99/127 (77.95%), Query Frame = 0
Query:    1 MDVSDRGSDS-GDDIARAKKVLEECSSLSKKLASVISSWAVSDEDGGGSAAGAGSS----NGALELTNLKAGGKAVTTNEEIEDACPGLKLNPYQLVGVNWMCLLRETGVNGVLADEMGLGKTVQTI 122
            MD SDRGSDS  D+ ARA+KVL ECS+LSKKLASVIS+WA +                   GALE+ +LK GGKAVTTNEE+++ACPGLKLNPYQLVGVNWMCLLR+T VNGVLADEMGLGKTVQ+I
Sbjct:  377 MDGSDRGSDSDADEGARARKVLSECSALSKKLASVISTWAGTXXXXXXXXXXXXXXXXXXRGALEICSLKGGGKAVTTNEEVQEACPGLKLNPYQLVGVNWMCLLRDTNVNGVLADEMGLGKTVQSI 503          
BLAST of mRNA_S-dermatodea_contig8643.16794.1 vs. uniprot
Match: A0A6H5KRD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD4_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 3.360e-41
Identity = 90/136 (66.18%), Postives = 102/136 (75.00%), Query Frame = 0
Query:    1 MDVSDRGSDS-GDDIARAKKVLEECSSLSKKLASVISSWAVSDED-------------GGGSAAGAGSSNGALELTNLKAGGKAVTTNEEIEDACPGLKLNPYQLVGVNWMCLLRETGVNGVLADEMGLGKTVQTI 122
            MD SDRGSDS  D+ ARA+KVL ECS+LSKKLASVIS+WA +                GGG         GALE+ +LK GGKAVTTNEE+++ACPGLKLNPYQLVGVNWMCLLR+T VNGVLADEMGLGKTVQ+I
Sbjct:  480 MDGSDRGSDSDADEGARARKVLSECSALSKKLASVISTWAGTXXXXXXXXXXXXXXRVGGG--------RGALEICSLK-GGKAVTTNEEVQEACPGLKLNPYQLVGVNWMCLLRDTNVNGVLADEMGLGKTVQSI 606          
BLAST of mRNA_S-dermatodea_contig8643.16794.1 vs. uniprot
Match: K3WMP5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMP5_GLOUD)

HSP 1 Score: 87.0 bits (214), Expect = 1.780e-17
Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 0
Query:   19 KVLEECSSLSKKLASVISSWAVSDEDGGGSAAGAGSSNGA----------LELTNLKAGGKAVTTNEEIEDACPGLKLNPYQLVGVNWMCLLRETGVNGVLADEMGLGKTVQTI 122
            ++L +C  +++KL   I SW+         +A + + +GA          +  T+  AGG+ V T ++I + C  L LNPYQ+VGVNW+ LL E  V+GVLADEMGLGKTVQTI
Sbjct:  382 QLLRDCERIAEKLRKSIKSWSGGPAASSSPSAASANDDGAEDEDHVSIAAINSTDGSAGGRRVVTQDDIPNICETLVLNPYQVVGVNWLLLLCENSVSGVLADEMGLGKTVQTI 495          
BLAST of mRNA_S-dermatodea_contig8643.16794.1 vs. uniprot
Match: A0A397FBG6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FBG6_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.880e-12
Identity = 42/103 (40.78%), Postives = 55/103 (53.40%), Query Frame = 0
Query:   20 VLEECSSLSKKLASVISSWAVSDEDGGGSAAGAGSSNGALELTNLKAGGKAVTTNEEIEDACPGLKLNPYQLVGVNWMCLLRETGVNGVLADEMGLGKTVQTI 122
            +L+ C +++  L   I+ W  S+ D              + LT +      + T  EI    P L L PYQLVGVNW+ LL +  V+ VLADEMGLGKTVQTI
Sbjct:   97 MLQSCEAIASTLRVSIAKWGQSNTDE------------QVTLTTINDADHRMLTQGEIPGLSPSLVLQPYQLVGVNWLYLLYQHKVSAVLADEMGLGKTVQTI 187          
BLAST of mRNA_S-dermatodea_contig8643.16794.1 vs. uniprot
Match: W4GVJ4_9STRA (Uncharacterized protein n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVJ4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.990e-12
Identity = 42/103 (40.78%), Postives = 55/103 (53.40%), Query Frame = 0
Query:   20 VLEECSSLSKKLASVISSWAVSDEDGGGSAAGAGSSNGALELTNLKAGGKAVTTNEEIEDACPGLKLNPYQLVGVNWMCLLRETGVNGVLADEMGLGKTVQTI 122
            +L+ C +++  L   I+ W  S+ D              + LT +      + T  EI    P L L PYQLVGVNW+ LL +  V+ VLADEMGLGKTVQTI
Sbjct:  337 MLQSCEAIASTLRVSIAKWGQSNTDE------------QVTLTTINDADHRMLTQGEIPGLSPSLVLQPYQLVGVNWLYLLYQHKVSAVLADEMGLGKTVQTI 427          
BLAST of mRNA_S-dermatodea_contig8643.16794.1 vs. uniprot
Match: A0A1V9YP31_9STRA (ATP-dependent helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YP31_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 5.240e-11
Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 0
Query:   20 VLEECSSLSKKLASVISSWA---VSDEDGGGSAAGAGSSNGALELTNLKAGGKAVTTNEEIEDACPGLKLNPYQLVGVNWMCLLRETGVNGVLADEMGLGKTVQTI 122
            +L+ C++L+++L + +S W+   ++DE                 L  + AG + V T + I    P L+L PYQ+VGVNW+ LL +  ++ VLADEMGLGKTVQTI
Sbjct:  291 ILQTCAALAEELRTSVSQWSSATIADE---------------TALVAVDAGVQFVQTRD-IPGLSPTLELQPYQVVGVNWLYLLYQHKMSAVLADEMGLGKTVQTI 380          
BLAST of mRNA_S-dermatodea_contig8643.16794.1 vs. uniprot
Match: A0A7S3G5R0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G5R0_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 5.570e-11
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 0
Query:   86 LNPYQLVGVNWMCLLRETGVNGVLADEMGLGKTVQTI 122
            L P+QLVG+NWM LL+E G+NG+LADEMGLGKTVQTI
Sbjct:   12 LRPFQLVGLNWMLLLKELGLNGILADEMGLGKTVQTI 48          
BLAST of mRNA_S-dermatodea_contig8643.16794.1 vs. uniprot
Match: A0A024UXM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UXM7_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 7.170e-11
Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 0
Query:   20 VLEECSSLSKKLASVISSWAVSDEDGGGSAAGAGSSNGALELTNLKAGGKAVTTNEEIEDACPGLKLNPYQLVGVNWMCLLRETGVNGVLADEMGLGKTVQTI 122
            +L+ C ++S  L   I+ W  S+ D              + LT +K   + + T ++I    P L L PYQ+VG+NW+ LL +  V+ VLADEMGLGKTVQTI
Sbjct:  333 MLQSCEAISSTLRLSIAKWGQSNTDE------------EVALTAIK-DDERMLTQKDIPGLNPSLVLQPYQVVGINWLYLLYQHKVSAVLADEMGLGKTVQTI 422          
BLAST of mRNA_S-dermatodea_contig8643.16794.1 vs. uniprot
Match: A0A7M7IMB7_NASVI (Uncharacterized protein n=2 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7IMB7_NASVI)

HSP 1 Score: 67.4 bits (163), Expect = 1.320e-10
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   70 AVTTNEEIEDACPGLKLNPYQLVGVNWMCLLRETGVNGVLADEMGLGKTVQTI 122
            A T  E+ +    GLKL PYQ+VG+NW+ +L    VNG+LADEMGLGKTVQ I
Sbjct:  267 ASTIKEQPKGLADGLKLAPYQMVGLNWLAVLHAQNVNGILADEMGLGKTVQVI 319          
BLAST of mRNA_S-dermatodea_contig8643.16794.1 vs. uniprot
Match: F6UJS3_CIOIN (Uncharacterized protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6UJS3_CIOIN)

HSP 1 Score: 67.0 bits (162), Expect = 1.760e-10
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0
Query:   82 PGLKLNPYQLVGVNWMCLLRETGVNGVLADEMGLGKTVQTI 122
            P   L PYQ++G+NWMCLL+   +NG+LADEMGLGKT+QTI
Sbjct:  135 PRFTLKPYQMIGLNWMCLLQRNKLNGILADEMGLGKTIQTI 175          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8643.16794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSU0_ECTSI3.240e-4168.50Similar to helicase, lymphoid-specific isoform 9 n... [more]
A0A6H5KRD4_9PHAE3.360e-4166.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K3WMP5_GLOUD1.780e-1742.98Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A397FBG6_9STRA5.880e-1240.78Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4GVJ4_9STRA5.990e-1240.78Uncharacterized protein n=13 Tax=Aphanomyces astac... [more]
A0A1V9YP31_9STRA5.240e-1139.62ATP-dependent helicase n=1 Tax=Achlya hypogyna Tax... [more]
A0A7S3G5R0_9EUKA5.570e-1178.38Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
A0A024UXM7_9STRA7.170e-1139.81Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7M7IMB7_NASVI1.320e-1058.49Uncharacterized protein n=2 Tax=Nasonia vitripenni... [more]
F6UJS3_CIOIN1.760e-1065.85Uncharacterized protein n=2 Tax=Ciona intestinalis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 60..122
e-value: 1.4E-16
score: 62.1
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 17..122
NoneNo IPR availablePANTHERPTHR10799:SF964SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A CONTAINING DEAD/H BOX 1coord: 17..122
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 79..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8643contigS-dermatodea_contig8643:6770..7758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8643.16794.1mRNA_S-dermatodea_contig8643.16794.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8643 6747..7758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8643.16794.1 ID=prot_S-dermatodea_contig8643.16794.1|Name=mRNA_S-dermatodea_contig8643.16794.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=122bp
MDVSDRGSDSGDDIARAKKVLEECSSLSKKLASVISSWAVSDEDGGGSAA
GAGSSNGALELTNLKAGGKAVTTNEEIEDACPGLKLNPYQLVGVNWMCLL
RETGVNGVLADEMGLGKTVQTI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase