prot_S-dermatodea_contig8641.16787.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8641.16787.1
Unique Nameprot_S-dermatodea_contig8641.16787.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length525
Homology
BLAST of mRNA_S-dermatodea_contig8641.16787.1 vs. uniprot
Match: D7G7M1_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M1_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 1.060e-75
Identity = 233/560 (41.61%), Postives = 294/560 (52.50%), Query Frame = 0
Query:    1 REKASFESLAEGLRARTLELESANASMEREMRNAQQDALARLRESERQRDAALYEAKRCTEQAAVAEAWRTKDAHRADAAESSALASRAEAAELRSETARLRAGTDAAISPHLKRHADLQMQLDEARREAAKLTAQEECLKTKHAADMASLKDEVSSKLPQIAEKAVTEAGRQWGRRADEQMVAVKNERDQRLKELQAAVVEAETKRHADLADVKVDAERFRAIAEKLAAENRSIRQELGRLLASSKTPASASSTQAASVRGDARTSATRSPGAGDDGGWSTSGATWEGALHAQVLQQVEAHISSLRAHL-NVTSGQGCLNA-VGVDTGGY-------SGGSPVPQFGQSGVGTAP-VSTPLAVETRGNYHVSPT-----AGKESGLTEMEDLRLTRLLRATKSSSPDKGRSAIGSAALGDNDVQCGDDDGSLNSRRRSAGQGGTFHD---AGGVGSDSLGIGGDVAEALLL--------GPDDISRKLFT-SPEGN----SRERI-RRAGAGR----HGATTGQGSYGGGEEGDDLEDISDGGYHSGCWRRKYASGEMR 524
            R KA+ ES AE  RAR  EL+SANASMEREMRN QQDAL+RLRESER+RDAA+YE KR  E AA AE WR K+  RADAAE+ AL++  E AELRSE ARLR   DA  +PH+KR+ +L+ Q+ +ARR AA LTA+ + L+  H ++++SLKDEVS KLP IAEKAV EAG+ + ++A+E M A++ +RD+RL+ELQAA+           A  +V+AERFR                                                                        VL QVEAHI++LRA L + T G   L    G + GG        SGG+ +P    S  G    V  PL VETRGNYH  P      +G E GLTE ED+RL RLLR++ SS+        G      +  +  +    LN +R         H+   +GG GS      GD  +            G  D+ R+LF  SP G     S +++ RR G  R    + AT   GS  G  E DDLEDISDGG+HSGCWRRKY  GEMR
Sbjct:  953 RTKAALESEAESFRARAAELQSANASMEREMRNGQQDALSRLRESERERDAAVYEGKRSAELAASAETWRLKETLRADAAEAKALSTGTEVAELRSEAARLRTSMDAVAAPHVKRNMELRRQVQDARRGAADLTAEAKRLQETHTSELSSLKDEVSRKLPWIAEKAVAEAGKHFRQKAEEDMKALRADRDRRLEELQAAMTXXXXXXXXXXAGARVEAERFR------------------------------------------------------------------------VLGQVEAHINALRAQLKHETPGPDSLTGNEGPNPGGGAGLSSTPSGGTRMPGHSVSAAGAGETVEVPLPVETRGNYHHPPPTARERSGNEDGLTEREDMRLNRLLRSSNSSALSSPPPTPGDVMAPISPHRRAE----LNEQRSITTATPGVHNNGASGGEGSARRVGEGDAEQQYRYAIGGATDGGVSDLPRELFAASPTGGTGRTSGDKLARRLGEARDNGGYTATPRFGSLAGDVE-DDLEDISDGGFHSGCWRRKYVRGEMR 1435          
BLAST of mRNA_S-dermatodea_contig8641.16787.1 vs. uniprot
Match: A0A6H5L6C5_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6C5_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 6.010e-44
Identity = 127/262 (48.47%), Postives = 162/262 (61.83%), Query Frame = 0
Query:    1 REKASFESLAEGLRARTLELESANASMEREMRNAQQDALAR--------------------------------------------------------LRESERQRDAALYEAKRCTEQAAVAEAWRTKDAHRADAAESSALASRAEAAELRSETARLRAGTDAAISPHLKRHADLQMQLDEARREAAKLTAQEECLKTKHAADMASLKDEVSSKLPQIAEKAVTEAGRQWGRRADEQMVAVKNERDQRLKELQ----AAVVE 202
            R KA+FES AE  RAR  EL+SANASMEREMRN+QQDAL+R                                                        LRESER+RDAA+YE KR TE AA AE WR K+  RADAAE+ AL++  E AELRSE ARLR   DA ++PH+KR+ +LQ Q+++ARREAA LTA+ + L+  HA++++SLKDEVS KLP IAEKAV EA + + ++A+E M A + +RD+RL+ELQ    AA+VE
Sbjct: 1043 RTKAAFESEAESFRARAAELQSANASMEREMRNSQQDALSRWSEQCIGRFRMGGLEQRIAAHCGKQAAERSVVRSTEAKAKAVHKLFVVPRTPTHDRLRESERERDAAVYEGKRSTELAASAETWRLKETLRADAAEAKALSTGTEVAELRSEAARLRTSMDAVVAPHVKRNVELQRQVEDARREAADLTAEVKRLQESHASELSSLKDEVSRKLPWIAEKAVAEARKHFRQKAEEDMKAFRADRDRRLEELQILQLAALVE 1304          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8641.16787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7M1_ECTSI1.060e-7541.61WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5L6C5_9PHAE6.010e-4448.47WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 116..143
NoneNo IPR availableCOILSCoilCoilcoord: 186..206
NoneNo IPR availableCOILSCoilCoilcoord: 218..238
NoneNo IPR availableCOILSCoilCoilcoord: 10..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8641contigS-dermatodea_contig8641:3553..7472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8641.16787.1mRNA_S-dermatodea_contig8641.16787.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8641 3553..7472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8641.16787.1 ID=prot_S-dermatodea_contig8641.16787.1|Name=mRNA_S-dermatodea_contig8641.16787.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=525bp
REKASFESLAEGLRARTLELESANASMEREMRNAQQDALARLRESERQRD
AALYEAKRCTEQAAVAEAWRTKDAHRADAAESSALASRAEAAELRSETAR
LRAGTDAAISPHLKRHADLQMQLDEARREAAKLTAQEECLKTKHAADMAS
LKDEVSSKLPQIAEKAVTEAGRQWGRRADEQMVAVKNERDQRLKELQAAV
VEAETKRHADLADVKVDAERFRAIAEKLAAENRSIRQELGRLLASSKTPA
SASSTQAASVRGDARTSATRSPGAGDDGGWSTSGATWEGALHAQVLQQVE
AHISSLRAHLNVTSGQGCLNAVGVDTGGYSGGSPVPQFGQSGVGTAPVST
PLAVETRGNYHVSPTAGKESGLTEMEDLRLTRLLRATKSSSPDKGRSAIG
SAALGDNDVQCGDDDGSLNSRRRSAGQGGTFHDAGGVGSDSLGIGGDVAE
ALLLGPDDISRKLFTSPEGNSRERIRRAGAGRHGATTGQGSYGGGEEGDD
LEDISDGGYHSGCWRRKYASGEMR*
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