prot_S-dermatodea_contig864.16786.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig864.16786.1
Unique Nameprot_S-dermatodea_contig864.16786.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length124
Homology
BLAST of mRNA_S-dermatodea_contig864.16786.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 9.320e-25
Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 0
Query:    1 MRVLGEPIGTEPYHQRRFVNDLLQGESAELLRALATMEDAQASFQVLRLSAAVRTSFILRNVPPDITKAPMEDFDSLLEWCLASIIAGPGASAAGLPSPDEAR--------------------LPIREGGYGLTSSADIRDAAF 124
            M ++G P+GTE + QR FV +  +G  AEL+R L+T++D QAS+Q+LRLS   R   +LR + P IT     + D+L+ W ++ I+ G  A+  G+P+ +E R                    LPIREGG G+TSS  IR++AF
Sbjct:  126 MAIVGVPVGTECF-QRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 268          
BLAST of mRNA_S-dermatodea_contig864.16786.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.510e-23
Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 0
Query:    1 MRVLGEPIGTEPYHQRRFVNDLLQGESAELLRALATMEDAQASFQVLRLSAAVRTSFILRNVPPDITKAPMEDFDSLLEWCLASIIAGPGASAAGLPSPDEAR--------------------LPIREGGYGLTSSADIRDAAF 124
            M ++G P+GTE + QR FV +  +G  AEL+R L+T++D QAS+Q+LRLS   R   +LR + P IT     + D+L+ W ++ I+ G  A+  G+P+ +E R                    LPIREGG G+TSS  IR++AF
Sbjct:  427 MAIVGVPVGTECF-QRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 569          
BLAST of mRNA_S-dermatodea_contig864.16786.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 103 bits (257), Expect = 3.150e-23
Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 0
Query:    1 MRVLGEPIGTEPYHQRRFVNDLLQGESAELLRALATMEDAQASFQVLRLSAAVRTSFILRNVPPDITKAPMEDFDSLLEWCLASIIAGPGASAAGLP-------SPD------------EARLPIREGGYGLTSSADIRDAAF 124
            MR++G P+G EP + +R   D+ +GE  +LL+ +A+++DAQAS Q+LR SAA R +F+LR++PPD+TK    +FD  +E  L +I+ GP       P       SP             +ARLP+REGG G+ S+ DI   AF
Sbjct: 1462 MRIVGVPVG-EPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNGPSQPGEHAPHEPTEENSPSLPRLNLSPVGIRQARLPVREGGLGIPSTVDISGPAF 1603          
BLAST of mRNA_S-dermatodea_contig864.16786.1 vs. uniprot
Match: A0A6H5KFL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL6_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.330e-22
Identity = 54/145 (37.24%), Postives = 84/145 (57.93%), Query Frame = 0
Query:    1 MRVLGEPIGTEPYHQRRFVNDLLQGESAELLRALATMEDAQASFQVLRLSAAVRTSFILRNVPPDITKAPMEDFDSLLEWCLASIIAGPGASAAGLPSPDEAR---------------------LPIREGGYGLTSSADIRDAAF 124
            M V+G P+GTE + QR FV+ + +G+ AEL+  LAT++D QAS+Q+LRLS   R   +LR + P IT +  +  D+++ W ++ I+ G  A +  +P+  E R                     LP+REGG G+TS+  IR++AF
Sbjct:    1 MPVVGIPVGTEEF-QRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 144          
BLAST of mRNA_S-dermatodea_contig864.16786.1 vs. uniprot
Match: A0A6H5JL76_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL76_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.540e-22
Identity = 55/144 (38.19%), Postives = 81/144 (56.25%), Query Frame = 0
Query:    1 MRVLGEPIGTEPYHQRRFVNDLLQGESAELLRALATMEDAQASFQVLRLSAAVRTSFILRNVPPDITKAPMEDFDSLLEWCLASIIAGPGASAAGLPSPDEAR--------------------LPIREGGYGLTSSADIRDAAF 124
            M ++G P+GTE + QR FV +  +G  AEL+R L+T++D QAS+Q+LRLS   R   +LR   P IT     + D+L+ W ++ I+ G  A+  G+P+ +E R                    LPIREGG  +T S  IR++AF
Sbjct:   93 MAIVGVPVGTECF-QRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTTAPSITSTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLRITCSVLIRESAF 235          
BLAST of mRNA_S-dermatodea_contig864.16786.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 6.230e-21
Identity = 54/145 (37.24%), Postives = 83/145 (57.24%), Query Frame = 0
Query:    1 MRVLGEPIGTEPYHQRRFVNDLLQGESAELLRALATMEDAQASFQVLRLSAAVRTSFILRNVPPDITKAPMEDFDSLLEWCLASIIAGPGASAAGLPSPDEAR---------------------LPIREGGYGLTSSADIRDAAF 124
            M V+G P GTE + QR FV+ + +G+ AEL+  LAT++D QAS+Q+LRLS   R   +LR + P IT +  +  D+++ W ++ I+ G  A +  +P+  E R                     LP+REGG G+TS+  IR++AF
Sbjct:   93 MPVVGIPAGTEEF-QRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 236          
BLAST of mRNA_S-dermatodea_contig864.16786.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.100e-20
Identity = 54/145 (37.24%), Postives = 84/145 (57.93%), Query Frame = 0
Query:    1 MRVLGEPIGTEPYHQRRFVNDLLQGESAELLRALATMEDAQASFQVLRLSAAVRTSFILRNVPPDITKAPMEDFDSLLEWCLASIIAGPGASAAGLPSPDEAR---------------------LPIREGGYGLTSSADIRDAAF 124
            M V+G P+GTE + QR FV+ + +G+ AEL+  LAT++D QAS+Q+LRLS   R   +LR + P IT +  +  D+++ W ++ I+ G  A +  +P+  E R                     LP+REGG G+TS+  IR++AF
Sbjct:  427 MPVVGIPVGTEEF-QRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 570          
BLAST of mRNA_S-dermatodea_contig864.16786.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.120e-20
Identity = 54/145 (37.24%), Postives = 84/145 (57.93%), Query Frame = 0
Query:    1 MRVLGEPIGTEPYHQRRFVNDLLQGESAELLRALATMEDAQASFQVLRLSAAVRTSFILRNVPPDITKAPMEDFDSLLEWCLASIIAGPGASAAGLPSPDEAR---------------------LPIREGGYGLTSSADIRDAAF 124
            M V+G P+GTE + QR FV+ + +G+ AEL+  LAT++D QAS+Q+LRLS   R   +LR + P IT +  +  D+++ W ++ I+ G  A +  +P+  E R                     LP+REGG G+TS+  IR++AF
Sbjct:  427 MPVVGIPVGTEEF-QRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 570          
BLAST of mRNA_S-dermatodea_contig864.16786.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.120e-20
Identity = 54/145 (37.24%), Postives = 84/145 (57.93%), Query Frame = 0
Query:    1 MRVLGEPIGTEPYHQRRFVNDLLQGESAELLRALATMEDAQASFQVLRLSAAVRTSFILRNVPPDITKAPMEDFDSLLEWCLASIIAGPGASAAGLPSPDEAR---------------------LPIREGGYGLTSSADIRDAAF 124
            M V+G P+GTE + QR FV+ + +G+ AEL+  LAT++D QAS+Q+LRLS   R   +LR + P IT +  +  D+++ W ++ I+ G  A +  +P+  E R                     LP+REGG G+TS+  IR++AF
Sbjct:  275 MPVVGIPVGTEEF-QRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 418          
BLAST of mRNA_S-dermatodea_contig864.16786.1 vs. uniprot
Match: A0A6H5KKJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ7_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 2.040e-20
Identity = 54/145 (37.24%), Postives = 84/145 (57.93%), Query Frame = 0
Query:    1 MRVLGEPIGTEPYHQRRFVNDLLQGESAELLRALATMEDAQASFQVLRLSAAVRTSFILRNVPPDITKAPMEDFDSLLEWCLASIIAGPGASAAGLPSPDEAR---------------------LPIREGGYGLTSSADIRDAAF 124
            M V+G P+GTE + QR FV+ + +G+ AEL+  LAT++D QAS+Q+LRLS   R   +LR + P IT +  +  D+++ W ++ I+ G  A +  +P+  E R                     LP+REGG G+TS+  IR++AF
Sbjct:   93 MPVVGIPVGTEEF-QRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFQLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 236          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig864.16786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5K541_9PHAE9.320e-2539.58Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KGJ4_9PHAE1.510e-2339.58Reverse transcriptase domain-containing protein n=... [more]
A0A6P0N5L4_9CYAN3.150e-2340.56Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KFL6_9PHAE1.330e-2237.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL76_9PHAE3.540e-2238.19Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLD7_9PHAE6.230e-2137.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCM0_9PHAE1.100e-2037.24Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE1.120e-2037.24Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K1H0_9PHAE1.120e-2037.24Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKJ7_9PHAE2.040e-2037.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig864contigS-dermatodea_contig864:20512..20946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig864.16786.1mRNA_S-dermatodea_contig864.16786.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig864 20509..20946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig864.16786.1 ID=prot_S-dermatodea_contig864.16786.1|Name=mRNA_S-dermatodea_contig864.16786.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=124bp
MRVLGEPIGTEPYHQRRFVNDLLQGESAELLRALATMEDAQASFQVLRLS
AAVRTSFILRNVPPDITKAPMEDFDSLLEWCLASIIAGPGASAAGLPSPD
EARLPIREGGYGLTSSADIRDAAF
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