prot_S-dermatodea_contig86341.16781.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig86341.16781.1
Unique Nameprot_S-dermatodea_contig86341.16781.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length49
Homology
BLAST of mRNA_S-dermatodea_contig86341.16781.1 vs. uniprot
Match: D8LTT3_ECTSI (Eukaryotic translation initiation factor 4E-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTT3_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 4.450e-22
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0
Query:    1 MVLGLVGETIDVGDEICGARVVDKSKGNHVVYRFELWLRSNDHSTAAR 48
            MVLGLVGET+DVGDEICGARVVDKSK NH VYRFELWLRSND +TAAR
Sbjct:  117 MVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSNDGNTAAR 164          
BLAST of mRNA_S-dermatodea_contig86341.16781.1 vs. uniprot
Match: A0A835ZBP0_9STRA (Eukaryotic translation initiation factor 4E-like 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBP0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 6.410e-15
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MVLGLVGETIDVGDEICGARVVDKSKGNHVVYRFELWLRSNDHSTAAR 48
            +VLGL+GETID  DEICGARVVDKS+G    YRFELWLR+ +  T AR
Sbjct:  118 LVLGLIGETIDWADEICGARVVDKSRGKDTYYRFELWLRAREPGTTAR 165          
BLAST of mRNA_S-dermatodea_contig86341.16781.1 vs. uniprot
Match: A0A2R5GD67_9STRA (Eukaryotic translation initiation factor 4E n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GD67_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.150e-12
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 MVLGLVGETIDVGDEICGARVVDKSKGNHVVYRFELWLRSND 42
            ++LGLVGETID GDEICG RVVDKSK N   YR E+W RS D
Sbjct:  119 LLLGLVGETIDNGDEICGVRVVDKSKSNRPTYRLEMWFRSRD 160          
BLAST of mRNA_S-dermatodea_contig86341.16781.1 vs. uniprot
Match: R1BIV2_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BIV2_EMIHU)

HSP 1 Score: 67.4 bits (163), Expect = 1.340e-12
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 MVLGLVGETIDVGDEICGARVVDKSKGNHVVYRFELWLRSND 42
            +VLG++GET+D GDEICGARVVDKS     +YR ELW R ND
Sbjct:  115 IVLGMIGETLDAGDEICGARVVDKSVNGRTMYRLELWFRKND 156          
BLAST of mRNA_S-dermatodea_contig86341.16781.1 vs. uniprot
Match: A0A7S0HHF8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHF8_9EUKA)

HSP 1 Score: 67.8 bits (164), Expect = 2.150e-12
Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    1 MVLGLVGETIDVGDEICGARVVDKSKGNHVVYRFELWLRSNDHSTA 46
            +VLG+VGETID  DEICGARVVDKS G   +YR ELW R  D + A
Sbjct:  170 LVLGMVGETIDPADEICGARVVDKSSGTRCMYRLELWFRKKDETIA 215          
BLAST of mRNA_S-dermatodea_contig86341.16781.1 vs. uniprot
Match: R1DXY0_EMIHU (Monogalactosyldiacylglycerol synthase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DXY0_EMIHU)

HSP 1 Score: 67.4 bits (163), Expect = 7.510e-12
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 MVLGLVGETIDVGDEICGARVVDKSKGNHVVYRFELWLRSND 42
            +VLG++GET+D GDEICGARVVDKS     +YR ELW R ND
Sbjct:  539 IVLGMIGETLDAGDEICGARVVDKSVNGRTMYRLELWFRKND 580          
BLAST of mRNA_S-dermatodea_contig86341.16781.1 vs. uniprot
Match: A0A7S2CNW6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CNW6_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 2.410e-11
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    1 MVLGLVGETIDVGDEICGARVVDKSKGNHVVYRFELWLRSNDHSTA 46
            +VLG++GETID  D+ICGARVVDKS G   +YR ELW +  D + A
Sbjct:  125 LVLGMIGETIDPADDICGARVVDKSSGTRQMYRLELWFKRKDDAVA 170          
BLAST of mRNA_S-dermatodea_contig86341.16781.1 vs. uniprot
Match: A0A7S3EX75_9EUKA (Hypothetical protein n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EX75_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 3.800e-11
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 MVLGLVGETIDVGDEICGARVVDKSKGNHVVYRFELWLRSNDHSTA 46
            + LG++GETID GDEICGARVVDK  G   +YR ELW +  D   A
Sbjct:  133 LALGMIGETIDHGDEICGARVVDKCAGGRCMYRLELWFKKKDQGIA 178          
BLAST of mRNA_S-dermatodea_contig86341.16781.1 vs. uniprot
Match: A0A0M0J7R1_9EUKA (Translation initiation factor n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7R1_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 2.290e-10
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 MVLGLVGETIDVGDEICGARVVDKSKGNHVVYRFELWLRSNDHSTA 46
            + LG++GETID  D+ICGARVVDKS G   ++R ELW +  D S A
Sbjct:   14 LALGMIGETIDPLDDICGARVVDKSVGTRQLFRLELWFKRKDLSVA 59          
BLAST of mRNA_S-dermatodea_contig86341.16781.1 vs. uniprot
Match: A0A7S3HCL6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCL6_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 5.790e-10
Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    1 MVLGLVGETIDVGDEICGARVVDKSKGNHVVYRFELWLRSNDHS 44
            +V+GL+GETID GDEICG RVV++++     Y+ ELWLR+ D S
Sbjct:  127 LVMGLIGETIDEGDEICGCRVVNQTRKGKPTYKIELWLRTTDES 170          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig86341.16781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LTT3_ECTSI4.450e-2289.58Eukaryotic translation initiation factor 4E-like 1... [more]
A0A835ZBP0_9STRA6.410e-1568.75Eukaryotic translation initiation factor 4E-like 1... [more]
A0A2R5GD67_9STRA1.150e-1271.43Eukaryotic translation initiation factor 4E n=1 Ta... [more]
R1BIV2_EMIHU1.340e-1266.67Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7S0HHF8_9EUKA2.150e-1265.22Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
R1DXY0_EMIHU7.510e-1266.67Monogalactosyldiacylglycerol synthase n=1 Tax=Emil... [more]
A0A7S2CNW6_9EUKA2.410e-1158.70Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S3EX75_9EUKA3.800e-1158.70Hypothetical protein n=2 Tax=Haptolina ericina Tax... [more]
A0A0M0J7R1_9EUKA2.290e-1056.52Translation initiation factor n=1 Tax=Chrysochromu... [more]
A0A7S3HCL6_9STRA5.790e-1056.82Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10coord: 1..48
e-value: 4.3E-7
score: 31.6
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig86341contigS-dermatodea_contig86341:433..579 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig86341.16781.1mRNA_S-dermatodea_contig86341.16781.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig86341 433..585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig86341.16781.1 ID=prot_S-dermatodea_contig86341.16781.1|Name=mRNA_S-dermatodea_contig86341.16781.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=49bp
MVLGLVGETIDVGDEICGARVVDKSKGNHVVYRFELWLRSNDHSTAAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023398TIF_eIF4e-like