prot_S-dermatodea_contig86286.16774.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig86286.16774.1
Unique Nameprot_S-dermatodea_contig86286.16774.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length40
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig86286.16774.1 vs. uniprot
Match: D7FT33_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT33_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 6.640e-9
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 0 
Query:    4 VLRLSLQAEVRASEAKARRSKTTGSLVVTMPKVD 37
            VLRLSLQAEV+A EAKARRSKTTGSLVVTMPKVD
Sbjct:  370 VLRLSLQAEVKAGEAKARRSKTTGSLVVTMPKVD 403
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig86286.16774.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT33_ECTSI6.640e-994.12Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig86286contigS-dermatodea_contig86286:21..140 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig86286.16774.1mRNA_S-dermatodea_contig86286.16774.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig86286 21..140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig86286.16774.1 ID=prot_S-dermatodea_contig86286.16774.1|Name=mRNA_S-dermatodea_contig86286.16774.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=40bp
RPQVLRLSLQAEVRASEAKARRSKTTGSLVVTMPKVDRYQ
back to top