mRNA_S-dermatodea_contig1274.1677.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1274.1677.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 100 bits (250), Expect = 5.350e-23 Identity = 49/83 (59.04%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 1 FGCDTLDDGVNYLRADYSKTCTNDTHRAYMIYAGVMVFVYPIGIPATFACWLMRNRADLGKPERDEMDHLEAFKSVWGAYRPS 249
F CDTLDDGV+YLRADYS TC + A+ YA VMV VYPIGIPATFA L NR DL K +RD + +L+ +W AY+PS
Sbjct: 831 FVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQPLGDLWEAYKPS 913
BLAST of mRNA_S-dermatodea_contig1274.1677.1 vs. uniprot
Match: D7G021_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G021_ECTSI) HSP 1 Score: 100 bits (249), Expect = 5.430e-23 Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 1 FGCDTLDDGVNYLRADYSKTCTNDTHRAYMIYAGVMVFVYPIGIPATFACWLMRNRADLGKPERDEMDHLEAFKSVWGAYR 243
F C+TL+DGV+YLRADY C + H A+ +YAGVMV VYP+GIPA F WL RNR DL P R E LE K++W +Y+
Sbjct: 106 FSCETLEDGVSYLRADYGFVCFSRRHVAFRVYAGVMVLVYPLGIPALFGWWLRRNRHDLRSPSRAENADLEPAKALWESYK 186
BLAST of mRNA_S-dermatodea_contig1274.1677.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 2.810e-22 Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 1 FGCDTLDDGVNYLRADYSKTCTNDTHRAYMIYAGVMVFVYPIGIPATFACWLMRNRADLGKPERD--------EMDHLEAFKSVWGAYRP 246
F C+TLDDGV YLRADYS C+ DTH A +YAG+M+FVYP GIPA F WL+ NR DL K + + + +L+ + +W Y+P
Sbjct: 183 FVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANGGSTATAKSLGNLQPMRDLWAPYKP 272
BLAST of mRNA_S-dermatodea_contig1274.1677.1 vs. uniprot
Match: A0A6H5L0E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0E1_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 3.470e-22 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 1 FGCDTLDDGVNYLRADYSKTCTNDTHRAYMIYAGVMVFVYPIGIPATFACWLMRNRADLGKPERDEMDHLEAFKSVWGAYRPS 249
F CD LDDG++YLRADYS TC +TH AY +YAG+M+ VYP+GIP F WL ++R +L + R+ L+ +W Y+PS
Sbjct: 39 FVCDPLDDGISYLRADYSLTCETETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAALKPAADLWEPYKPS 121
BLAST of mRNA_S-dermatodea_contig1274.1677.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 6.460e-22 Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 1 FGCDTLDDGVNYLRADYSKTCTNDTHRAYMIYAGVMVFVYPIGIPATFACWLMRNRADLGKPERD--------EMDHLEAFKSVWGAYRP 246
F C+TLDDGV YLRADYS TC+ H A M YAG+M+ VYP+GIP ++ WL+ NR DL K +DHL+ + +W +Y+P
Sbjct: 859 FVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPRLDHLQPMRDLWSSYKP 948
BLAST of mRNA_S-dermatodea_contig1274.1677.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 7.880e-21 Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 1 FGCDTLDDGVNYLRADYSKTCTNDTHRAYMIYAGVMVFVYPIGIPATFACWLMRNRADLGKPERDEMDHLEAFKSVWGAYRPS 249
F CD LDDG +YLR+DYS TC +TH AY +YAG+M+ VYP+GIP F WL ++R +L + R+ L+ +W Y+PS
Sbjct: 833 FVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAVLKPAADLWEPYKPS 915
BLAST of mRNA_S-dermatodea_contig1274.1677.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 1.220e-20 Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 1 FGCDTLDDGVNYLRADYSKTCTNDTHRAYMIYAGVMVFVYPIGIPATFACWLMRNR---ADLGKPER-----DEMDHLEAFKSVWGAYRP 246
F C+ LD G++YLRADYS TC H+A M+YAG+M+FVYP+GIPA +A WL+ R +G P E+DHL+ + +W Y+P
Sbjct: 148 FVCERLDTGMDYLRADYSLTCYTGVHKAMMVYAGLMIFVYPVGIPAFYAWWLLFIRHYLVKVGAPNNFLERVPELDHLQPMRDLWAPYKP 237
BLAST of mRNA_S-dermatodea_contig1274.1677.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 3.030e-20 Identity = 44/85 (51.76%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 1 FGCDTLDDGVNYLRADYSKTCTNDTHRAYMIYAGVMVFVYPIGIPATFACWLMRNRADLGKPERDEM---DHLEAFKSVWGAYRP 246
F C+TLDD V YLRADYS TC+ TH +YAG+MV VYPIGIPA FA WL NR DL + ++L K +W Y+P
Sbjct: 141 FMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVRERSSGTATPENLRPMKDLWEPYKP 225
BLAST of mRNA_S-dermatodea_contig1274.1677.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 6.790e-20 Identity = 44/85 (51.76%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 1 FGCDTLDDGVNYLRADYSKTCTNDTHRAYMIYAGVMVFVYPIGIPATFACWLMRNRADLGKPERDEM---DHLEAFKSVWGAYRP 246
F C+TLDD V YLRADYS TC+ TH +YAG+MV VYPIGIPA FA WL NR DL + ++L K +W Y+P
Sbjct: 163 FMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVQDRSGGTTTPENLRPMKDLWEPYKP 247
BLAST of mRNA_S-dermatodea_contig1274.1677.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 4.760e-17 Identity = 40/82 (48.78%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 1 FGCDTLDDGVNYLRADYSKTCTNDTHRAYMIYAGVMVFVYPIGIPATFACWLMRNRADLGKPERDEMDHLEAFKSVWGAYRP 246
F CD+LDDG NYLRADY CT H A +YAGVMV VYP+GIP +A L ++R L D+ + S+W AY+P
Sbjct: 819 FACDSLDDGNNYLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDILANASADKAG-AQPIASLWEAYKP 899 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1274.1677.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1274.1677.1 >prot_S-dermatodea_contig1274.1677.1 ID=prot_S-dermatodea_contig1274.1677.1|Name=mRNA_S-dermatodea_contig1274.1677.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=83bp FGCDTLDDGVNYLRADYSKTCTNDTHRAYMIYAGVMVFVYPIGIPATFACback to top mRNA from alignment at S-dermatodea_contig1274:17996..18245+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1274.1677.1 ID=mRNA_S-dermatodea_contig1274.1677.1|Name=mRNA_S-dermatodea_contig1274.1677.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=250bp|location=Sequence derived from alignment at S-dermatodea_contig1274:17996..18245+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1274:17996..18245+ >mRNA_S-dermatodea_contig1274.1677.1 ID=mRNA_S-dermatodea_contig1274.1677.1|Name=mRNA_S-dermatodea_contig1274.1677.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at S-dermatodea_contig1274:17996..18245+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |