prot_S-dermatodea_contig86212.16769.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig86212.16769.1
Unique Nameprot_S-dermatodea_contig86212.16769.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length55
Homology
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BLAST of mRNA_S-dermatodea_contig86212.16769.1 vs. uniprot
Match: A0A6G6CDI6_SACJA (Sulfotransferase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDI6_SACJA)

HSP 1 Score: 71.6 bits (174), Expect = 2.410e-13
Identity = 27/51 (52.94%), Postives = 40/51 (78.43%), Query Frame = 0 
Query:    4 RHLRLRYEDVATSPELAANLIYVWSGLRPVPSSVLNWIEQNTKLPGCQHGT 54
            R+L +RYED+AT+PE+A  L+Y W+GL P+P++V  WI+ NTK+P C  G+
Sbjct:  154 RYLLMRYEDIATTPEIAVELMYYWAGLGPLPANVKEWIDANTKMPACDSGS 204
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BLAST of mRNA_S-dermatodea_contig86212.16769.1 vs. uniprot
Match: A0A7L4XQX3_SACJA (Carbohydrate sulfotranserase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A7L4XQX3_SACJA)

HSP 1 Score: 70.1 bits (170), Expect = 1.050e-12
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0 
Query:    4 RHLRLRYEDVATSPELAANLIYVWSGLRPVPSSVLNWIEQNTKLPGCQHG 53
            R+LR+RYED+ATSPELA   IY W GL  VP+SV  W+E NT +P C  G
Sbjct:  232 RYLRVRYEDIATSPELAVAFIYYWCGLGTVPASVSEWVEVNTNMPTCDGG 281
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig86212.16769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6G6CDI6_SACJA2.410e-1352.94Sulfotransferase n=1 Tax=Saccharina japonica TaxID... [more]
A0A7L4XQX3_SACJA1.050e-1260.00Carbohydrate sulfotranserase n=2 Tax=Saccharina ja... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig86212contigS-dermatodea_contig86212:14..178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig86212.16769.1mRNA_S-dermatodea_contig86212.16769.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig86212 14..178 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig86212.16769.1 ID=prot_S-dermatodea_contig86212.16769.1|Name=mRNA_S-dermatodea_contig86212.16769.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=55bp
YALRHLRLRYEDVATSPELAANLIYVWSGLRPVPSSVLNWIEQNTKLPGC
QHGTR
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