mRNA_S-dermatodea_contig862.16767.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig862.16767.1 vs. uniprot
Match: A0A6H5KI98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI98_9PHAE) HSP 1 Score: 778 bits (2009), Expect = 8.790e-258 Identity = 559/963 (58.05%), Postives = 642/963 (66.67%), Query Frame = 3
Query: 102 MTPPAAKRQRSVEHSESTRNLHVVKGGLSIMCPADSMGMLIGKGGSGLRELQDNSGVKVTLQETKSMPEGARERGVGLSGSLDCVAGVQKTIFEKLNARRQTSLAPSPSEEEFELAYQAALAAGLDPNNLPDP-DPLDPLRVSVVRWIMDNTQCGWLIGKGGSGIQNIEASSGAEVRVASEKSSAKTSGERIVYIKGNPKQRDVALDLIRSNPKISGRVAPVNEHEIAAVHVPSKAIGYILGHRGASIQALTEKTGAQLRVAPASETLTGSSEQRVDITGTPKQIVCARHALAARVAEWKLTSNPNNEVQELEFALKVAVPQPLVGHIIGKGGVFVREILSMTGVQVKVQQDSGSPTMWGDACCVMLAGTMTNLFKAQQMMMERIANISDRLKEMVPNAVTISPEDNPESPVRQLEVNIQLPDGPPPSLPPHGFQQPPPFGQQXXXXXXXXXXFGQPGPXXXXXXXXXXXXXXXFMPGQPSFQAPFQPQFGQPAPGQPPQQQQPY-----------------RAPQSPRSAVAQTDNINFNSIRELRAPGLTRAQKVKEGVLLLVDNAVIGSIIGKGGQTVRKVSNDTTVQIQVQGRDEVSPSQLERRVTLTSDDIPALLKASNMICAVLRNNEKLANAAREGNXXXXXXXXXXR----------------PGQYNPSRAASGPPQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAI-SPFPPQQ-GFAAQQPAQGVSPQQAYPFPQQVQVQXXXXXXXXXXXXXXXQVQPGQFAPQQXXXXQAAPVYYQVQPGQXXXXXXXXXXXXXXXXXXXXXXXXXAGTNGLAPGNPQGMQFAQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXQXXXXXXX---------------MPAXXXXXXXXXXXXXXQQ-AAPAPAGAQTPAPVYGWVYDPATGTYTAAPAAATPAPQSNPYPAQPQYSQ 2834
MTPPAAKR+RSVEH ES RN+ VVKGGLSIMCP+D+MGMLIGKGGSGLRE+Q+ +GVKV+LQETKS+PEGA+ERGVGLSGSLDCVA V+K IFEKLNARR TSLAPSP+EEEFE+AY+AA AAG++PN + D D DP +++VVRWIMDN CGWLIGKGGSGIQNIEA+SGA+VRVA+E+S K S ERIVY+KGN QR+ AL+LIR+NPKI+GRVA E E+AAVHVPSKA+G+ILGHRGASIQALTEKTGAQLRVA SE TG E RVDITG PKQIV ARHAL RVAEW+ ++NPN E +E E+ LKVAVPQPLVGHIIGKGG FVRE+LS+T V K+QQD+GSPT+WGDACCVML+GT N+ +AQ+M++ERIAN SDRLKEMVPNAV I +P ++++EVNIQLPDGPPP P GFQQPPPFG XXXXXXXXXX X P GQPP QQQ R P R+ + +NI F SIR+L APGLT A K G+L+LVDN+V+GSIIGKGGQT+RK+S ++ IQVQGRDE SPSQLERRVT+TSD++P L+KA+NMICAVLRN E+LA AARE XXXXXXXX P YNP+ G PQS+ A+ S +P QQ GF A Q A G QQAY QQ XXXX Q P Q QQ Q A Y Q XXXXXXXXXXXXXXXXXXX + G PQ +Q+AQ Q XXXXXXXX X XXXXXXX +P XXXXXXXXXXXXXX A A TPAPVYGWVYDPATGTYTAAP AA PAPQ++ + AQPQY+Q
Sbjct: 1 MTPPAAKRRRSVEHHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGMEPNGIADVGDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKAQREAALELIRTNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNV--KIQQDTGSPTLWGDACCVMLSGTFGNVVRAQRMILERIANTSDRLKEMVPNAVNILENHDPSDEMKRVEVNIQLPDGPPPVQTPVGFQQPPPFGXXXXXXXXXXXXXXXXXXXRQG-----------------------------PNMGQPPFQQQQXXXXXXXXXXXXXXXXXXRGPPRGRADLPPVENITFTSIRQLSAPGLTSASKQPGGMLMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTITSDEMPVLMKAANMICAVLRNGERLAAAAREAGGGXXXXXXXXXXXXXXXXXXXDRNRGGPAPYNPA----GLPQSAQPQPTAAPVNYQYQQAPPQQQNVQYAPAPAMQSTYPAQQQGFVALQAAPGAPIQQAY---QQYXXXXXXXQTPGQQQQLAPQGVPQQ--QQQAPPAQGAVGQYAPQXXXXXXXXXXXXXXXXXXXXXXAVFYQQPAGGTPSQGGPQAIQYAQVQQPQQQQQLGXXXXXXXXQGLMQQQQQPXXXXXXXXXXXXXXXXXXXXXXXXLPVXXXXXXXXXXXXXXXXPVASTSAAVATPAPVYGWVYDPATGTYTAAPTAAAPAPQASSFNAQPQYTQ 923
BLAST of mRNA_S-dermatodea_contig862.16767.1 vs. uniprot
Match: D8LLL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL1_ECTSI) HSP 1 Score: 749 bits (1933), Expect = 5.130e-249 Identity = 406/625 (64.96%), Postives = 479/625 (76.64%), Query Frame = 3
Query: 102 MTPPAAKRQRSVEHSESTRNLHVVKGGLSIMCPADSMGMLIGKGGSGLRELQDNSGVKVTLQETKSMPEGARERGVGLSGSLDCVAGVQKTIFEKLNARRQTSLAPSPSEEEFELAYQAALAAGLDPNNLPD-PDPLDPLRVSVVRWIMDNTQCGWLIGKGGSGIQNIEASSGAEVRVASEKSSAKTSGERIVYIKGNPKQRDVALDLIRSNPKISGRVAPVNEHEIAAVHVPSKAIGYILGHRGASIQALTEKTGAQLRVAPASETLTGSSEQRVDITGTPKQIVCARHALAARVAEWKLTSNPNNEVQELEFALKVAVPQPLVGHIIGKGGVFVREILSMTGVQVKVQQDSGSPTMWGDACCVMLAGTMTNLFKAQQMMMERIANISDRLKEMVPNAVTISPEDNPESPVRQLEVNIQLPDGPPPSLPPHGFQQPPPFGQQXXXXXXXXXXFGQPGPXXXXXXXXXXXXXXXFMPGQPSFQAPFQPQFGQPAPGQPPQQQQPYRAPQSPRSAVAQTDNINFNSIRELRAPGLTRAQKVKEGVLLLVDNAVIGSIIGKGGQTVRKVSNDTTVQIQVQGRDEVSPSQLERRVTLTSDDIPALLKASNMICAVLRNNEKLANAARE 1973
MTPPAAKR+RSVEH ES RN+ VVKGGLSIMCP+D+MGMLIGKGGSGLRE+Q+ +GVKV+LQETKS+PEGA+ERGVGLSGSLDCVA V+K IFEKLNARR TSLAPSP+EEEFE+AY+AA AAG++PN D D DP +++VVRWIMDN CGWLIGKGGSGIQNIEA+SGA+VRVA+E+S K S ERIVY+KGN QR+ AL+LIR+NPKI+GRVA +E E+AAVHVPSKA+G+ILGHRGASIQALTEKTGAQLRVA SE TG E RVDITG PKQIV ARHAL RVAEW+ ++NPN E +E E+ LKVAVPQPLVGHIIGKGG FVRE+LS+T VQVK+QQD+GSPTMWGDACCVML+GT N+ +AQ+M++ERIAN SDRLKEMVPNAV I +P ++++EVNIQLPDGPPP P GFQ + P A P+ G AP + P RAP + + +NI F SIR+L APGLT A K G+L+LVDN+V+GSIIGKGGQT+RK+S ++ IQVQGRDE SPSQLERRVT+TSD++P L+KA+NMICAVLRN E+LA AARE
Sbjct: 72 MTPPAAKRRRSVEHHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGATDVSDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKSQREAALELIRTNPKITGRVASPSEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQVKIQQDTGSPTMWGDACCVMLSGTFGNVVRAQRMILERIANTSDRLKEMVPNAVNILENHDPSDEMKRVEVNIQLPDGPPPVQAPVGFQG---------------------------------------LLNNPRRSASSLPRTGL-APPPSSEASPPARAPTW--ADLPPVENITFTSIRQLSAPGLTSASKQPGGMLMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTITSDEMPILMKAANMICAVLRNGERLAAAARE 654
BLAST of mRNA_S-dermatodea_contig862.16767.1 vs. uniprot
Match: K8Z837_NANGC (Kh domain protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z837_NANGC) HSP 1 Score: 165 bits (417), Expect = 1.200e-37 Identity = 122/382 (31.94%), Postives = 199/382 (52.09%), Query Frame = 3
Query: 183 LSIMCPADSMGMLIGKGGSGLRELQDNS-GVKVTLQETKSMPEGARERGVGLSGSLDCVAGVQKTIFEKLNARRQTSLAPSPSEEEFELAYQAALAAGLDPNNLPDPDPLDPLRVSVVRWIMDNTQCGWLIGKGGSGIQNIEASSGAEVRVASEKSSAKTSGE-RIVYIKGNPKQRDVALDLIRSNPKISGR----VAPVNEHEIAAVHVPSKAIGYILGHRGASIQALTEKTGAQLRVAPASETLTGSSEQRVDITGTPKQIVCARHALAARVAEWKLTSNPNN-----------------EVQELEFALKVAVPQPLVGHIIGKGGVFVREILSMTGVQVKVQQDSGSPTMWGDACCVMLAGTMTNLFKAQQMMMERIAN 1259
L+I+ P ++MG+LIG+ G+ +E+ + V++ +Q+ K M EG +RG+ LSGS + VA Q I +KL RR + + E+ L AG DP RV+V +W + G LIGK G+ + +I + SGA +R+ E+ + + R VY+ G +RD AL LIR K+ G + + V VP +A+G ++G +GA ++ L E TGA++ +A +T GS+E + + G+ ++I AR + RV W++ + +E E +K ++P PL+GH+IGKGG F+RE L +GV VK+ Q+ S T D VML G + + +Q +++R+A+
Sbjct: 236 LTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLED--------TLFAGPDP------------RVTV-KWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIRE--KVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKIGDTEMGSNETSIVLDGSQQEINAAREIVRERVFAWRMQESKERAERALTEAAAEELGMQASAEEEEVTIKFSLPVPLMGHVIGKGGSFIRE-LHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMAS 593
BLAST of mRNA_S-dermatodea_contig862.16767.1 vs. uniprot
Match: A0A4D9CVC2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVC2_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.860e-37 Identity = 124/399 (31.08%), Postives = 204/399 (51.13%), Query Frame = 3
Query: 183 LSIMCPADSMGMLIGKGGSGLRELQDNS-GVKVTLQETKSMPEGARERGVGLSGSLDCVAGVQKTIFEKLNARRQTSLAPSPSEEEFELAYQAALAAGLDPNNLPDPDPLDPLRVSVVRWIMDNTQCGWLIGKGGSGIQNIEASSGAEVRVASEKSSAKTSGE-RIVYIKGNPKQRDVALDLIRSNPKISGR----VAPVNEHEIAAVHVPSKAIGYILGHRGASIQALTEKTGAQLRVAPASETLTGSSEQRVDITGTPKQIVCARHALAARVAEWKLTSNPNN-----------------EVQELEFALKVAVPQPLVGHIIGKGGVFVREILSMTGVQVKVQQDSGSPTMWGDACCVMLAGTMTNLFKAQQMMMERIANISDRLKEMVPNAVTISP 1310
L+I+ P ++MG+LIG+ G+ +E+ + V++ +Q+ K M EG +RG+ LSGS + VA Q I +KL RR + + E+ L AG DP RV+V +W + G LIGK G+ + +I + SGA +R+ E+ + + R VY+ G +RD AL LIR K+ G + + V VP +A+G ++G +GA ++ L E TGA++ +A +T GS+E + + G ++I AR + RV W++ + +E E +K ++P PL+GH+IGKGG F+RE L +GV VK+ Q+ S T D VML G + + +Q +++R+A+ + E + + +P
Sbjct: 236 LTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLED--------TLFAGSDP------------RVTV-KWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIRE--KVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKIGDTEMGSNETSIVLDGGQQEINAAREIVRERVFAWRMQESKERAERALTEAAAEELGMQASAEEEEVTIKFSLPVPLMGHVIGKGGSFIRE-LHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMASAPPKAIEQIKPITSSAP 610
BLAST of mRNA_S-dermatodea_contig862.16767.1 vs. uniprot
Match: A0A7S3XK83_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK83_HETAK) HSP 1 Score: 141 bits (355), Expect = 2.020e-32 Identity = 106/388 (27.32%), Postives = 192/388 (49.48%), Query Frame = 3
Query: 183 LSIMCPADSMGMLIGKGGSGLRELQDNSGVKVTLQETKSMPEGARERGVGLSGSLDCVAGVQKTIFEKLNARRQTSLAPSPSEEEFELAYQAALAAGLDPNNLPDPDPLDPLRVSVVRWIMDNTQCGWLIGKGGSGIQNIEASSGAEVRVASEKSSAKTSGERIVYIKGNP----KQRDVALDLIRS-----------NPKISGRVAP-------VNEHEIAAVHVPSKAIGYILGHRGASIQALTEKTGAQLRVAPASETLTGSSEQRVDITGTPKQIVCARHALAARVAEWKLTSNP--NNEVQELEFALKVAVPQPLVGHIIGKGGVFVREILSMTGVQVKVQQDSGSPTMWGDACCVMLAGTMTNLFKAQQMMMERIANISDRL 1274
++++ P + +G +IGKGGS +R+LQ ++ V LQE ++PEGA ERGV LSG +D + Q+ I ++ R+ L +E E + +W++ + + G +IGK G+GI+ ++ +GA + VA+ K + +R+V ++G+ K R + DL+ S N + + A + + + VP ++IG +LG G I+ +T ++ A +++A G ++ V ITGTP+ AR + A VA+WK + E ++ + +K+AVP L H++G+ G F+R++ + GV VK+ D G+ D C +M+ G + + AQ+++ R+ + L
Sbjct: 7 ITLLFPIEGIGTIIGKGGSTIRQLQRDAECNVRLQEPSTVPEGAAERGVTLSGPVDHMLDAQRRILAVIDQERR-GLEGQAEDEGDEKTH---------------------------KWLIPDHRAGLVIGKRGAGIEELKKKTGAHIWVAAVYEMPKGTEDRLVTVRGDEAACEKARKMLEDLVGSVVVPLEDGGQRNLRWPAKGAAGAAGGMAIGGDDQELLTVPIRSIGALLGSGGGEIKRVTVESKANIQIAQ--NMFLGDVDRSVTITGTPEARAKARAMIEATVAKWKADQGDQYHEEGEKRDLCVKMAVPAALAPHLLGRSGAFIRQVQAC-GVTVKLLSDKGTFNRLVDYCPLMIIGKLAAVEAAQRLLQARVREAPEDL 363
BLAST of mRNA_S-dermatodea_contig862.16767.1 vs. uniprot
Match: W7T8V1_9STRA (Rna-binding protein nova-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T8V1_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.290e-18 Identity = 79/240 (32.92%), Postives = 127/240 (52.92%), Query Frame = 3
Query: 183 LSIMCPADSMGMLIGKGGSGLRELQDNS-GVKVTLQETKSMPEGARERGVGLSGSLDCVAGVQKTIFEKLNARRQTSLAPSPSEEEFELAYQAALAAGLDPNNLPDPDPLDPLRVSVVRWIMDNTQCGWLIGKGGSGIQNIEASSGAEVRVASEKSSAKTSGE-RIVYIKGNPKQRDVALDLIRSNPKISGR----VAPVNEHEIAAVHVPSKAIGYILGHRGASIQALTEKTGAQLRVA 884
L+I+ P ++MG+LIG+ G+ +E+ + V++ +Q+ K M EG +RG+ LSGS + VA Q I +KL RR + + E+ L AG DP RV+V +W + G LIGK G+ + +I + SGA +R+ E+ + + R VY+ G +RD AL LIR K+ G + + V VP +A+G ++G +GA ++ L E TGA++ +A
Sbjct: 111 LTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLED--------TLFAGPDP------------RVTV-KWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIRE--KVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLA 327
BLAST of mRNA_S-dermatodea_contig862.16767.1 vs. uniprot
Match: A0A3Q0SIN8_AMPCI (NOVA alternative splicing regulator 1 n=2 Tax=Cichlidae TaxID=8113 RepID=A0A3Q0SIN8_AMPCI) HSP 1 Score: 96.7 bits (239), Expect = 2.720e-17 Identity = 92/342 (26.90%), Postives = 156/342 (45.61%), Query Frame = 3
Query: 183 LSIMCPADSMGMLIGKGGSGLRELQDNSGVKVTLQETKSMPEGARERGVGLSGSLDCVAGVQKTIFEKLNARRQTSLAPSPSEEEFELAYQAALAAGLDPNNLPDPDPLDPLRVSVVRWIMDNTQCGWLIGKGGSGIQNIEASSGAEVRVASEKSSAKTSGERIVYIKGNPKQRDVALDLI----RSNPK-----------ISGRVAPVNEHEIAAVHVPSKAIGYILGHRGASIQALTEKTGAQLRVAPASETLTGSSEQRVDITGTPKQIVCARHALAARVAEWKLTSNPNNEVQELEFALK----VAVPQPLVGHIIGKGGVFVREILSMTGVQVKVQQ 1151
L ++ P+ + G +IGKGG + +LQ +G + L ++K G ER + G+++ + GV I EK+ Q++ P P + L P +PD RV + I+ N+ G +IGKGG+ ++ + SGA V++ S+K ER+V I G P+Q A+++I + +P+ +SG VA N + + + + G L GA A++ +G L ++ S + G A LAA A ++NP +L K +AVP+ LVG I+GKGG + E +TG ++++ +
Sbjct: 15 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEP-------------VSILQPQTTVNPD-----RVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNVSGPVA--NSNPTGSPYANTGEAG--LTGMGAFPAAMSSLSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAA----SANPAAAAAKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 329
BLAST of mRNA_S-dermatodea_contig862.16767.1 vs. uniprot
Match: A0A3B4YXF0_9TELE (RNA-binding protein Nova-1-like n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4YXF0_9TELE) HSP 1 Score: 92.4 bits (228), Expect = 8.280e-16 Identity = 91/341 (26.69%), Postives = 154/341 (45.16%), Query Frame = 3
Query: 183 LSIMCPADSMGMLIGKGGSGLRELQDNSGVKVTLQETKSMPEGARERGVGLSGSLDCVAGVQKTIFEKLNARRQTSLAPSPSEEEFELAYQAALAAGLDPNNLPDPDPLDPLRVSVVRWIMDNTQCGWLIGKGGSGIQNIEASSGAEVRVASEKSSAKTSGERIVYIKGNPKQRDVALDLI----RSNPK-----------ISGRVAPVNEHEIAAVHVPSKAIGYILGHRGASIQALTEKTGAQLRVAPASETLTGSSEQRVDITGTPKQIVCARHALAARVAEWKLTSNPNNEVQELEFA---LKVAVPQPLVGHIIGKGGVFVREILSMTGVQVKVQQ 1151
L ++ P+ + G +IGKGG + +LQ +G + L ++K G ER + G+++ + GV I EK+ Q++ P P + L P +PD RV + I+ N+ G +IGKGG+ ++ + SGA V++ S+K ER+V I G P+Q A+++I + +P+ +SG VA N P +L + A+ A T +G L ++ S + G A LAA A ++NP + A +++AVP+ LVG I+GKGG + E +TG ++++ +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEP-------------VSILQPQTTVNPD-----RVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNVSGPVANSNP-----TGSPYANTAEVLPNAAAA--AATAFSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAA----SANPAAAAALADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 345
BLAST of mRNA_S-dermatodea_contig862.16767.1 vs. uniprot
Match: A0A498NHT4_LABRO (Poly(RC)-binding 3 isoform X6 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498NHT4_LABRO) HSP 1 Score: 90.5 bits (223), Expect = 8.550e-16 Identity = 77/289 (26.64%), Postives = 135/289 (46.71%), Query Frame = 3
Query: 183 LSIMCPADSMGMLIGKGGSGLRELQDNSGVKVTLQETKSMPEGARERGVGLSGSLDCVAGVQKTIFEKLNARRQTSLAPSPSEEEFELAYQAALAAGLDPNNLPDPDPLDPLRVSVVRWIMDNTQCGWLIGKGGSGIQNIEASSGAEVRVASEKSSAKTSGERIVYIKGNPKQ-----RDVALDLIRSNPKISGRVAPVNEHEIAAVHVPS--KAIGYILGHRGASIQALTEKTGAQLRVAPASETLTGSSEQRVDITGTPKQIVCARHALAARVAEWKLTSNPNNEVQ 1028
+ ++ +G +IGK G ++++++ SG ++ + E ER V ++G D + I K S++ SP+ + + +R ++ +QCG LIGKGGS I+ + S+GA+V+VA + S ER V I G P+ + + + ++ S PK G P + + S + IG I+G +G I + + +GAQ+++A A E GSSE+++ ITGTP I A++ + AR K S N+++
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV---------------------------TLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDM--LPNSTERAVTISGTPEAIIQCVKQICVVMLESPPK--GATIPYRPKPASTPVIFSGGQLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSERQITITGTPANISLAQYLINARTERKKKISVETNDMR 267
BLAST of mRNA_S-dermatodea_contig862.16767.1 vs. uniprot
Match: A0A8C5JGJ0_JUNHY (Uncharacterized protein n=5 Tax=Neognathae TaxID=8825 RepID=A0A8C5JGJ0_JUNHY) HSP 1 Score: 88.2 bits (217), Expect = 6.620e-15 Identity = 82/312 (26.28%), Postives = 146/312 (46.79%), Query Frame = 3
Query: 150 STRNLHVVKGGLSI------MCPADSMGMLIGKGGSGLRELQDNSGVKVTLQETKSMPEGARERGVGLSGSLDCVAGVQKTIFEKLNARRQTSLAPSPSEEEFELAYQAALAAGLDPNNLPDPDPLDPLRVSVVRWIMDNTQCGWLIGKGGSGIQNIEASSGAEVRVASEKSSAKTSGERIVYIKGNPKQ-----RDVALDLIRSNPK-----------------ISGRV------APVNEHEIAAVHVPSKAIGYILGHRGASIQALTEKTGAQLRVAPASETLTGSSEQRVDITGTPKQIVCARHALAAR 983
+T++ V +GGL++ + +G +IGK G ++++++ SG ++ + E ER V ++G D IF+ + L ++ + A + +++ P+ +R ++ +QCG LIGKGGS I+ I S+GA+V+VA + S ER V I G P + + + ++ S PK G+V A H + A P+ IG I+G +G+ I + + +GAQ+++A A+E GS+E++V ITG+P I A++ + AR
Sbjct: 2 NTKDGKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGT-----CPERIVTITGPTDA-------IFKAFSM--------------IALKFEEDINASMTNSSVTSKPPV------TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM--LPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAPIIFAGGQVRADTILASAGNHTVLAQPQPAPLIGCIIGRQGSKINEIRQMSGAQIKIANATE---GSAERQVTITGSPANISLAQYLINAR 276 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig862.16767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig862.16767.1 >prot_S-dermatodea_contig862.16767.1 ID=prot_S-dermatodea_contig862.16767.1|Name=mRNA_S-dermatodea_contig862.16767.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=931bp MVQVASPGGKSDGRQRVMTPPAAKRQRSVEHSESTRNLHVVKGGLSIMCPback to top mRNA from alignment at S-dermatodea_contig862:3118..17836+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig862.16767.1 ID=mRNA_S-dermatodea_contig862.16767.1|Name=mRNA_S-dermatodea_contig862.16767.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=14719bp|location=Sequence derived from alignment at S-dermatodea_contig862:3118..17836+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig862:3118..17836+ >mRNA_S-dermatodea_contig862.16767.1 ID=mRNA_S-dermatodea_contig862.16767.1|Name=mRNA_S-dermatodea_contig862.16767.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=5586bp|location=Sequence derived from alignment at S-dermatodea_contig862:3118..17836+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |