mRNA_S-dermatodea_contig8610.16761.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8610.16761.1 vs. uniprot
Match: A0A8J2SY22_9STRA (Hypothetical protein n=5 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SY22_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.170e-11 Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 4 PSWIADGICDKKNNNPSCAYDGGYCCECTCVSTVYFECG 120
P+WI DG+CD NNN +C+YDGG CCE TCVS+ + CG
Sbjct: 930 PNWIGDGMCDSSNNNAACSYDGGDCCEATCVSSTSYTCG 968
BLAST of mRNA_S-dermatodea_contig8610.16761.1 vs. uniprot
Match: A0A2E1MIS1_9BACT (Dockerin domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E1MIS1_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 1.170e-11 Identity = 28/45 (62.22%), Postives = 31/45 (68.89%), Query Frame = 1
Query: 1 IPSWIADGICDKKNNNPSCAYDGGYCCECTCVSTVYFECGESEYS 135
+ SWIADG CD NNNP C YDGG CCE TCV VY CG++ S
Sbjct: 1073 VISWIADGYCDLSNNNPDCGYDGGDCCESTCVDDVY-TCGDNNQS 1116
BLAST of mRNA_S-dermatodea_contig8610.16761.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 64.7 bits (156), Expect = 5.590e-11 Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 1
Query: 7 SWIADGICDKKNNNPSCAYDGGYCCECTCVSTVYFECGESEYS 135
SW+ DG CD NN PSC YDGG CCEC+CV +ECG + +S
Sbjct: 154 SWMNDGYCDSSNNYPSCDYDGGDCCECSCVDGHDYECGSNGFS 196
BLAST of mRNA_S-dermatodea_contig8610.16761.1 vs. uniprot
Match: D7G300_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G300_ECTSI) HSP 1 Score: 60.1 bits (144), Expect = 3.240e-10 Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 1
Query: 13 IADGICDKKNNNPSCAYDGGYCCECTCVSTVYFECGESEY 132
I +G CD +NN+PSC +DGG CC CTC TV + C ++E+
Sbjct: 36 IGNGRCDAENNSPSCGFDGGDCCSCTCTDTVLYSCADNEF 75
BLAST of mRNA_S-dermatodea_contig8610.16761.1 vs. uniprot
Match: D7FI82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI82_ECTSI) HSP 1 Score: 57.0 bits (136), Expect = 2.940e-9 Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 1
Query: 13 IADGICDKKNNNPSCAYDGGYCCECTCVSTV 105
+ DGICD++NNN C YDGG CCECTCV +V
Sbjct: 16 VGDGICDEENNNELCGYDGGDCCECTCVPSV 46
BLAST of mRNA_S-dermatodea_contig8610.16761.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 3.260e-9 Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 1
Query: 7 SWIADGICDKKNNNPSCAYDGGYCCECTCVST--VYFECGESEYS 135
SW D CD+ NNNPSC YDGG CCEC+C S+ + CGE+ ++
Sbjct: 63 SWKGDSWCDEINNNPSCDYDGGDCCECSCASSSSAEYSCGENGFN 107
BLAST of mRNA_S-dermatodea_contig8610.16761.1 vs. uniprot
Match: A0A6H5L262_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L262_9PHAE) HSP 1 Score: 55.1 bits (131), Expect = 2.600e-8 Identity = 22/43 (51.16%), Postives = 27/43 (62.79%), Query Frame = 1
Query: 7 SWIADGICDKKNNNPSCAYDGGYCCECTCVSTVYFECGESEYS 135
S + DG CD+ N C YDGG CCECTCV+ +ECG Y+
Sbjct: 45 SAVGDGNCDRDINFAECGYDGGDCCECTCVAEGEYECGAGGYA 87
BLAST of mRNA_S-dermatodea_contig8610.16761.1 vs. uniprot
Match: F0YE66_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE66_AURAN) HSP 1 Score: 57.0 bits (136), Expect = 2.910e-8 Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 1
Query: 4 PSWIADGICDKKNNNPSCAYDGGYCCECTCVSTVYFECGESEY 132
PS+++DG CD NN C YDGG CCE TCVST ++CG + Y
Sbjct: 514 PSYVSDGYCDPSNNVDPC-YDGGDCCESTCVSTSSYDCGVNGY 555
BLAST of mRNA_S-dermatodea_contig8610.16761.1 vs. uniprot
Match: A0A6S8W6X9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8W6X9_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.910e-8 Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 1
Query: 4 PSWIADGICDKKNNNPSCAYDGGYCCECTCVSTVYFECGESEYS 135
PS+ +G C NN SC YDGG CCE TC+ST ++CG + YS
Sbjct: 274 PSYQGNGYCTPSNNVASCEYDGGDCCESTCISTDVYDCGVNGYS 317
BLAST of mRNA_S-dermatodea_contig8610.16761.1 vs. uniprot
Match: A0A6S8W449_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8W449_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.910e-8 Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 1
Query: 4 PSWIADGICDKKNNNPSCAYDGGYCCECTCVSTVYFECGESEYS 135
PS+ +G C NN SC YDGG CCE TC+ST ++CG + YS
Sbjct: 41 PSYQGNGYCTPSNNVASCEYDGGDCCESTCISTDVYDCGVNGYS 84 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8610.16761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8610.16761.1 >prot_S-dermatodea_contig8610.16761.1 ID=prot_S-dermatodea_contig8610.16761.1|Name=mRNA_S-dermatodea_contig8610.16761.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=45bp IPSWIADGICDKKNNNPSCAYDGGYCCECTCVSTVYFECGESEYSback to top mRNA from alignment at S-dermatodea_contig8610:7993..8127- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8610.16761.1 ID=mRNA_S-dermatodea_contig8610.16761.1|Name=mRNA_S-dermatodea_contig8610.16761.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=135bp|location=Sequence derived from alignment at S-dermatodea_contig8610:7993..8127- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8610:7993..8127- >mRNA_S-dermatodea_contig8610.16761.1 ID=mRNA_S-dermatodea_contig8610.16761.1|Name=mRNA_S-dermatodea_contig8610.16761.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=270bp|location=Sequence derived from alignment at S-dermatodea_contig8610:7993..8127- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |