mRNA_S-dermatodea_contig86076.16760.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig86076.16760.1 vs. uniprot
Match: A0A6H5L5K3_9PHAE (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5K3_9PHAE) HSP 1 Score: 119 bits (298), Expect = 1.150e-31 Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 1
Query: 7 GHHAATLSVLLDPLLQPQHAFYTACALLVEFNTFLLILRRRVVWGRYLEIPFALSWVALRLVW 195
GHH ATLSVL+DPLLQPQHAFYTACALLVEFNTFLLILRRRV WG LE+PFALSWVALRL+W
Sbjct: 128 GHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIW 190
BLAST of mRNA_S-dermatodea_contig86076.16760.1 vs. uniprot
Match: A0A835Z8V7_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V7_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.110e-19 Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 7 GHHAATLSVLLDPLLQPQHAFYTACALLVEFNTFLLILRRRVVWGR--YLEIPFALSWVALRLVW 195
GHHAATL+VL+DP + PQHA YT ALLVE NTFLLI RRR WG +E PF SWVALRL+W
Sbjct: 125 GHHAATLAVLIDPYMHPQHALYTCWALLVEANTFLLIARRRFRWGASALVEAPFVASWVALRLIW 189
BLAST of mRNA_S-dermatodea_contig86076.16760.1 vs. uniprot
Match: A0A7S4PA72_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PA72_GUITH) HSP 1 Score: 83.6 bits (205), Expect = 8.130e-18 Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 7 GHHAATLSVLLDPLLQPQHAFYTACALLVEFNTFLLILRRRVVWGRYLEIPFALSWVALRLVW 195
HH ATL VLLDPLLQP+H YT+ LLVE NT LL+LRRRV + +E+PF L+WV LR +W
Sbjct: 131 SHHIATLLVLLDPLLQPKHRVYTSACLLVEINTLLLLLRRRVSYSAIVEVPFILTWVLLRNIW 193
BLAST of mRNA_S-dermatodea_contig86076.16760.1 vs. uniprot
Match: A0A7S0VYL2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VYL2_9CRYP) HSP 1 Score: 81.6 bits (200), Expect = 3.690e-17 Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 7 GHHAATLSVLLDPLLQPQHAFYTACALLVEFNTFLLILRRRVVWGRYLEIPFALSWVALRLVW 195
HHAATL VLLDPLL P H+ YT+ LLVE NT LL+LRR++ + +E+PF +SWV LR VW
Sbjct: 114 AHHAATLLVLLDPLLSPSHSVYTSACLLVEINTLLLLLRRKMSYSVLVEVPFIISWVLLRNVW 176
BLAST of mRNA_S-dermatodea_contig86076.16760.1 vs. uniprot
Match: A0A7S2V1S4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S4_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 5.220e-12 Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 10 HHAATLSVLLDPLLQP-----QHAFYTACALLVEFNTFLLILRRRVVWGRYLEIPFALSWVALRLVW 195
HH +TL++LL P+ +YTA A++VE NT LL +RR+ +G ++EIPFALSWV +RLVW
Sbjct: 110 HHISTLAILLGPIFNAISGSGLQGYYTAAAIIVEANTVLLTMRRKFKFGLWVEIPFALSWVLIRLVW 176
BLAST of mRNA_S-dermatodea_contig86076.16760.1 vs. uniprot
Match: A0A7S2B6S7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6S7_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.990e-11 Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 1
Query: 10 HHAATLSVLLDPLLQPQHAFYTACALLVEFNTFLLILRRRVVWGRYLEIPFALSWVALRLVW 195
HH TL+VL DP+ H Y +CALLVE NT L+ LRRR+ + E+ F +W+ALRL+W
Sbjct: 75 HHLGTLAVLYDPITVLNHQKYASCALLVEVNTVLITLRRRLGRPMWCEVSFLATWLALRLIW 136
BLAST of mRNA_S-dermatodea_contig86076.16760.1 vs. uniprot
Match: A0A2V0NST7_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NST7_9CHLO) HSP 1 Score: 48.5 bits (114), Expect = 5.540e-5 Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 1
Query: 7 GHHAATLSVLLDPLLQPQHAFYTACALLVEFNTFLLILRRRVVWGRYLEIPFALSWVALR 186
HH T +L P PQ+ + A + VE NT+LLI RRV+ GR +E+ F +W+ LR
Sbjct: 76 SHHLVTAVYMLIPYHYPQYQWCMAACMTVELNTWLLI-ARRVIGGRLIELSFYATWIVLR 134 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig86076.16760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig86076.16760.1 >prot_S-dermatodea_contig86076.16760.1 ID=prot_S-dermatodea_contig86076.16760.1|Name=mRNA_S-dermatodea_contig86076.16760.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=66bp MKGHHAATLSVLLDPLLQPQHAFYTACALLVEFNTFLLILRRRVVWGRYLback to top mRNA from alignment at S-dermatodea_contig86076:109..306- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig86076.16760.1 ID=mRNA_S-dermatodea_contig86076.16760.1|Name=mRNA_S-dermatodea_contig86076.16760.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=198bp|location=Sequence derived from alignment at S-dermatodea_contig86076:109..306- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig86076:109..306- >mRNA_S-dermatodea_contig86076.16760.1 ID=mRNA_S-dermatodea_contig86076.16760.1|Name=mRNA_S-dermatodea_contig86076.16760.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=396bp|location=Sequence derived from alignment at S-dermatodea_contig86076:109..306- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |