mRNA_S-dermatodea_contig8605.16758.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8605.16758.1 vs. uniprot
Match: A0A6H5KEX0_9PHAE (Isochorismatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEX0_9PHAE) HSP 1 Score: 140 bits (354), Expect = 4.190e-40 Identity = 69/101 (68.32%), Postives = 82/101 (81.19%), Query Frame = 1
Query: 1 PVFEKKLFSMCTEEVLAHLDSFANKPTDVVLFGLEAHVCVTQTCLDMLELGYGVHVVCDGVSSQKPYDRSVALSRMQQVGAHLTTVEQVVFQLAGSADHPK 303
P+FEKKLFSMCT+EV L ++ D VLFG+EAHVCVTQTCLD+L+LGY VHVVCDGVSSQKP+DR+VAL RMQQ GA LT+ EQV FQL +A++ K
Sbjct: 86 PIFEKKLFSMCTKEVEEELKKLPDRK-DAVLFGIEAHVCVTQTCLDLLDLGYEVHVVCDGVSSQKPHDRAVALQRMQQSGAFLTSAEQVTFQLLHTAENEK 185
BLAST of mRNA_S-dermatodea_contig8605.16758.1 vs. uniprot
Match: D7FJG0_ECTSI (Isochorismatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG0_ECTSI) HSP 1 Score: 141 bits (355), Expect = 1.550e-39 Identity = 69/101 (68.32%), Postives = 82/101 (81.19%), Query Frame = 1
Query: 1 PVFEKKLFSMCTEEVLAHLDSFANKPTDVVLFGLEAHVCVTQTCLDMLELGYGVHVVCDGVSSQKPYDRSVALSRMQQVGAHLTTVEQVVFQLAGSADHPK 303
P+FEKKLFSMCT+EV L ++ D VLFG+EAHVCVTQTCLD+L+LGY VHVVCDGVSSQKP+DR+VAL RMQQ GA LT+ EQV FQL +A++ K
Sbjct: 148 PIFEKKLFSMCTKEVEEELKKLPDRK-DAVLFGIEAHVCVTQTCLDLLDLGYDVHVVCDGVSSQKPHDRAVALQRMQQSGAFLTSAEQVTFQLLHTAENEK 247
BLAST of mRNA_S-dermatodea_contig8605.16758.1 vs. uniprot
Match: A0A6U1N7F4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N7F4_9STRA) HSP 1 Score: 128 bits (322), Expect = 4.070e-35 Identity = 60/100 (60.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query: 4 VFEKKLFSMCTEEVLAHLDSFANKPTDVVLFGLEAHVCVTQTCLDMLELGYGVHVVCDGVSSQKPYDRSVALSRMQQVGAHLTTVEQVVFQLAGSADHPK 303
V++KKLFSMCT++V A L++ T VVLFG+E HVC+ QTCLD+L G VHVV DG SSQ+PYDR VAL RM + GA +TT E VF+L G+A HPK
Sbjct: 100 VYDKKLFSMCTDQVNAELEAAGEGLTSVVLFGIETHVCIQQTCLDLLSRGLEVHVVADGCSSQRPYDRGVALQRMARAGAFVTTAESAVFELLGTAQHPK 199
BLAST of mRNA_S-dermatodea_contig8605.16758.1 vs. uniprot
Match: A0A7S0FTH2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FTH2_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.720e-33 Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 1
Query: 1 PVFEKKLFSMCTEEVLAHLDSFANKP-TDVVLFGLEAHVCVTQTCLDMLELGYGVHVVCDGVSSQKPYDRSVALSRMQQVGAHLTTVEQVVFQLAGSADHP 300
P+FEKKLFSM T EVL HL K T +LFG+EAHVCV QTCLD+LE+G+ VHV+ DGVSSQ+P DR VAL RM GA+LTT + F L SA+HP
Sbjct: 126 PIFEKKLFSMMTPEVLDHLAQPNMKDRTSFLLFGIEAHVCVQQTCLDLLEMGHDVHVIVDGVSSQQPIDREVALQRMMGAGAYLTTAQSAAFMLVKSAEHP 226
BLAST of mRNA_S-dermatodea_contig8605.16758.1 vs. uniprot
Match: A0A7S1E7D6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E7D6_9STRA) HSP 1 Score: 119 bits (298), Expect = 6.020e-33 Identity = 58/98 (59.18%), Postives = 69/98 (70.41%), Query Frame = 1
Query: 7 FEKKLFSMCTEEVLAHLDSFANKPTDVVLFGLEAHVCVTQTCLDMLELGYGVHVVCDGVSSQKPYDRSVALSRMQQVGAHLTTVEQVVFQLAGSADHP 300
FEKKLFSMC E++ HL K + VLFG+EAHVCV QT LD+LE G+ VH++ DGVSSQ+ YDR +AL RM Q GA LTT + F L SADHP
Sbjct: 1 FEKKLFSMCVEDLNEHLKGL--KRSSFVLFGIEAHVCVQQTALDLLEQGHDVHIIADGVSSQQSYDREIALQRMSQAGAWLTTAQSAAFMLMQSADHP 96
BLAST of mRNA_S-dermatodea_contig8605.16758.1 vs. uniprot
Match: A0A7S2I082_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I082_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.900e-32 Identity = 59/101 (58.42%), Postives = 73/101 (72.28%), Query Frame = 1
Query: 1 PVFEKKLFSMCTEEVLAHL-DSFANKPTDVVLFGLEAHVCVTQTCLDMLELGYGVHVVCDGVSSQKPYDRSVALSRMQQVGAHLTTVEQVVFQLAGSADHP 300
PVFEKKLFSM T +V +H ++ NK T +L G+EAHVCV QT LD+LE+G+ VH+V DGVSSQ+P+DR +AL RM GA LTT + F L SADHP
Sbjct: 165 PVFEKKLFSMMTPQVKSHFTETLQNKTTSFILVGIEAHVCVQQTALDLLEMGHDVHIVADGVSSQQPFDREIALQRMTGAGAFLTTAQSAAFMLMQSADHP 265
BLAST of mRNA_S-dermatodea_contig8605.16758.1 vs. uniprot
Match: A0A6V1K7V1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7V1_HETAK) HSP 1 Score: 120 bits (300), Expect = 9.490e-32 Identity = 63/100 (63.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query: 1 PVFEKKLFSMCTEEVLAHLDSFANKPTDVVLFGLEAHVCVTQTCLDMLELGYGVHVVCDGVSSQKPYDRSVALSRMQQVGAHLTTVEQVVFQLAGSADHP 300
PVFEKKLFSM T+EV LD VVLFG E HVCV QTCLD+LE G VHVV DG SSQ+P DR VAL RM Q GA +TT E +VF L SA HP
Sbjct: 89 PVFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHP 188
BLAST of mRNA_S-dermatodea_contig8605.16758.1 vs. uniprot
Match: W7U6T6_9STRA (Isochorismatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6T6_9STRA) HSP 1 Score: 120 bits (300), Expect = 9.970e-32 Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = 1
Query: 1 PVFEKKLFSMCTEEVLAHLDSFANKPTDVVLFGLEAHVCVTQTCLDMLELGYGVHVVCDGVSSQKPYDRSVALSRMQQVGAHLTTVEQVVFQLAGSADHPK 303
P FEKK+FSM T+E+ A + + T VVLFG+EAHVCV QT LD+LE GY VH++ DGVSSQK +DR+VAL RM++ GA LTT E +VF L +A HP+
Sbjct: 103 PTFEKKMFSMLTDELKAQMQCEPERKT-VVLFGIEAHVCVQQTALDLLEQGYAVHILVDGVSSQKAHDRAVALRRMEKAGAFLTTAESLVFMLMQTASHPQ 202
BLAST of mRNA_S-dermatodea_contig8605.16758.1 vs. uniprot
Match: A0A8K1CCB9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCB9_PYTOL) HSP 1 Score: 119 bits (298), Expect = 2.090e-31 Identity = 54/98 (55.10%), Postives = 72/98 (73.47%), Query Frame = 1
Query: 7 FEKKLFSMCTEEVLAHLDSFANKPTDVVLFGLEAHVCVTQTCLDMLELGYGVHVVCDGVSSQKPYDRSVALSRMQQVGAHLTTVEQVVFQLAGSADHP 300
F+K LFSM T EV H+++ ++P V+L G+E HVCV QTCLD+LE GY VHVV D +SS ++RS++L RM+Q GA +T+VE +FQLAG A HP
Sbjct: 109 FDKMLFSMMTPEVTQHVEALPSQPKSVILCGIEGHVCVLQTCLDLLEKGYDVHVVSDAISSSTAFNRSISLERMRQSGAFITSVESSIFQLAGDASHP 206
BLAST of mRNA_S-dermatodea_contig8605.16758.1 vs. uniprot
Match: A0A6U3TC81_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3TC81_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.170e-31 Identity = 56/100 (56.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query: 1 PVFEKKLFSMCTEEVLAHLDSFAN-KPTDVVLFGLEAHVCVTQTCLDMLELGYGVHVVCDGVSSQKPYDRSVALSRMQQVGAHLTTVEQVVFQLAGSADH 297
PVFEKKLFSMCTEE HL S ++ + T ++ G+EAHVC+ QTCLD+LE G+ VH++ DGVSSQ+ DR +AL RM+Q GA +TT + F L G AD+
Sbjct: 85 PVFEKKLFSMCTEECSKHLASLSSSEKTSYLIVGIEAHVCLQQTCLDLLEQGHDVHIIADGVSSQQKIDRDIALKRMEQSGAWITTCQSAAFMLLGGADN 184 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8605.16758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8605.16758.1 >prot_S-dermatodea_contig8605.16758.1 ID=prot_S-dermatodea_contig8605.16758.1|Name=mRNA_S-dermatodea_contig8605.16758.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=93bp MCTEEVLAHLDSFANKPTDVVLFGLEAHVCVTQTCLDMLELGYGVHVVCDback to top mRNA from alignment at S-dermatodea_contig8605:4329..5365- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8605.16758.1 ID=mRNA_S-dermatodea_contig8605.16758.1|Name=mRNA_S-dermatodea_contig8605.16758.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1037bp|location=Sequence derived from alignment at S-dermatodea_contig8605:4329..5365- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8605:4329..5365- >mRNA_S-dermatodea_contig8605.16758.1 ID=mRNA_S-dermatodea_contig8605.16758.1|Name=mRNA_S-dermatodea_contig8605.16758.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=558bp|location=Sequence derived from alignment at S-dermatodea_contig8605:4329..5365- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |