prot_S-dermatodea_contig86.16754.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig86.16754.1
Unique Nameprot_S-dermatodea_contig86.16754.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length269
Homology
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BLAST of mRNA_S-dermatodea_contig86.16754.1 vs. uniprot
Match: D7FQ74_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ74_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 1.700e-59
Identity = 111/189 (58.73%), Postives = 121/189 (64.02%), Query Frame = 0 
Query:   80 GQKNKQKTATRGTEVADRLSAELFSMLTDEGARPDDSAVMSKIEELEAAPGVTFNKDYLYDGPWRVLWKTNTEWQRYFDPLNGLADNKSYQWYKEGGSVTNIAQALGEKLYVTVDGQGAPASESTELPYEVNVEVSRAWLHAFGGKVPLDFIKGKGTTFVVYNDAKLRVFRSDTGGTVVQTKADEVVPV 268
            GQK K++  +  T    RLS ELF  LT EGA+PDD AVM KIEELE                                                 GSVTNIAQALG+KLYVTVDGQG+PAS  T+LPYEVNVEVSRAWLHA GGK+PLDFIKGKGTTFVVYNDA+LR+FRSDTGG VVQTKADEVVPV
Sbjct:   65 GQKTKEQNNSGETA---RLSEELFDFLTAEGAKPDDVAVMEKIEELE------------------------------------------------DGSVTNIAQALGDKLYVTVDGQGSPASTDTDLPYEVNVEVSRAWLHALGGKIPLDFIKGKGTTFVVYNDARLRIFRSDTGGVVVQTKADEVVPV 202
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig86.16754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ74_ECTSI1.700e-5958.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..268
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.898
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig86contigS-dermatodea_contig86:25565..28697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig86.16754.1mRNA_S-dermatodea_contig86.16754.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig86 25095..29559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig86.16754.1 ID=prot_S-dermatodea_contig86.16754.1|Name=mRNA_S-dermatodea_contig86.16754.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=269bp
MAITTVASTTRSVGTSLLLLLLLCCDAMVTAFVVTHCRARGWEICQGKAA
GDKLPFRSRPVHRQPRTMEMDLASLFFSFGQKNKQKTATRGTEVADRLSA
ELFSMLTDEGARPDDSAVMSKIEELEAAPGVTFNKDYLYDGPWRVLWKTN
TEWQRYFDPLNGLADNKSYQWYKEGGSVTNIAQALGEKLYVTVDGQGAPA
SESTELPYEVNVEVSRAWLHAFGGKVPLDFIKGKGTTFVVYNDAKLRVFR
SDTGGTVVQTKADEVVPV*
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