|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 602 |
| Cds size | 600 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8596.16752.1 >prot_S-dermatodea_contig8596.16752.1 ID=prot_S-dermatodea_contig8596.16752.1|Name=mRNA_S-dermatodea_contig8596.16752.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=200bp
PVVSCSSSSVALKEFIHRVRVDSGGGDQCLSSPTLRIADLDMEEEVVLVE
GRAPVIAQETSINDKGVGVEREGSRLDGTRPGIPHSNQSERARWESSNQS
ESGWVGSARSGVNRVAKRPETLSVPSAPGRTQRGKSAELPEQSAERPEQS
AERQEQFAERQEQFTERPEPEHLEQSAERDSLCFLSDNKGQDEVKMAPGT back to topmRNA from alignment at S-dermatodea_contig8596:5087..7937+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig8596.16752.1 ID=mRNA_S-dermatodea_contig8596.16752.1|Name=mRNA_S-dermatodea_contig8596.16752.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2851bp|location=Sequence derived from alignment at S-dermatodea_contig8596:5087..7937+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCAGTCGTATCCTGCTCATCGTCTTCCGTCGCTCTGAAGGAGTTCATACA
CCGTGTCCGCGTCGACTCTGGGGGCGGGGACCAATGCCTATCATCCCCTA
CCCTCCGCATTGCGGACTTGGACATGGAAGAGGAGGTGGTTTTGGTGGAA
GGTCGTGCTCCAGTGATTGCTCAGGTGGGTGGGGGGGGGTCTGCGCTAAC
GTGACCATGGCCATGAGTTTTGTTGCTGTTGTTGCTGTGGCCGGTGCTGG
CGTTGATTTTCATGTTTTTGGTGTTGCTGCTGTTGTTATTTTGTTGTTGG
AAGCTTTTGCTCTCTCCAGCGACTGCTGACGAGGAGGAGTGTTCGCTACT
TGTGCAAAACACGACTTGGTCCTGTTGTTATTGTTCATCAAGGAACATGA
GTCGGAATGCCCACACCCTAAGCCTTTGCAAGTTGAGGAGAGAGACAGCG
ATAACGTGATGGTTCCCTTCCGTGTAACGTACTACGAATAGTACCCCAAC
ACATTACTGGCACTGAAAACGACACGCACTCCTCCCAACGCAACGATACG
GGCCTACGCACCCTACATCTGCTTTATCTCGAAAGAGCTATAATATTTGT
GCAAGTACACGTGTTCGATTTGAGTTTGCGTAATTTGGGTGTGCTTTCCA
CCCCCATGGCGTATCAGTTGGCGTCGCAAACGCAAGGATGGTGTCTAGCA
GCTGGTATCATCCTTGTGAATCGAAGCCTGGTCGCCAAAAAAACGGCATA
TCGCTCCGTCTCGGCATTGTTGGGACGCGTTGTTTACGTCCTTCTGGATA
CGACACGTGTTTAACATAAGTACCACCCGAAGTACCCCCCAAAAAACTAA
AGATTTCAGAAACATAGAGCGAGCGTTGGGGTCCCACCTTTTCAAGAGGG
AAGATGGTCCAAGCTACCCCTATGGAGGCTCAGTTGTTACGTATGATGCT
ATGGTGTCTTATCATATATGATGCTGTATTGTTATGGTATGATATCAGGA
CGTGAGTACCCCCCCCCCTCCCCCCCCCCTGGTAAGTGCGCATATCGAAA
AAAATGCCTTCAAACCGCATGCGTCTTCGATCAAAGCAAATTGTTGTCCT
TTAATTCTCCGGTCCCCACGTGTCCTTGTTTTCGCTGGTTGTATCACATC
TCCAGGAGACGTCCATCAACGACAAAGGAGTTGGTGTAGAAAGAGAGGGA
TCACGTTTGGACGGGACTCGCCCAGGGATTCCCCATTCCAACCAATCAGA
ACGCGCCCGGTGGGAAAGTTCCAACCAATCAGAGTCGGGCTGGGTTGGTT
CGGCGCGTTCGGGGGTTAACAGGTGAGGGAGAACCGTTTTTCTCTTTTTT
TGCAAAATATGTCGTGGATTTCGGTAAAATGGTGGTGAGGCGGGAATTAC
TTTGGACTTTAGGTTAATACGGTAGGATCAGCTACTTTCGTTTCCGATTT
GTTTTCTTCTTAGCAGGCCCAAGTTCCAAGCTGTGTCCCCTCTGTTTCCG
AGCGTTAGTTTGTATCAGTTCCTTCTTCGTGCGTACTCCATAGGTAAATC
CCGTGAGATTTCGTTTTCGATCTCTCGATGTTCCATCTGACAACGAGCGG
GATCGGCAACCATTGGCGGGCCGGTCGGTTGTAAGTGTGCTATTACGTAG
GTACACTATAATCAAGTAATCAGGACCAAATATCATGACCGTGAATACCC
GACTATTCCGACCGTGAATACCCGAACAACGAAAATCTCACGAAAACCAA
AAAATACACGAGATATGGCCATACACAAGAACATCGACCTTTGAAATCTG
GATAATTCCAGCCTTTTTTTGTGTTCCTAGGTTGAGACTTGTGGCATATT
TGGATCTGTTTTAACCATGGTCCCCCGTAGTAATCAAATTTATCAAAATC
AGTCGATCAATAACCCTTGCGGACCTGAGTTCGGCTTCCCACCCGGTTCC
TACTTGCTGCTCCTGGCCGTAATGGCCGTGGGAGAGTGGTGATAGGTAAC
CCTGCCACGCTAAGCTTGGGCATTTACGTTACAATCGTAGTGCGTGCACA
CTTCAGACAGTGCAATACATACATGCTGATGTCGGATTAGTGATGAGAAG
ATTTGACATGTGAGCTGTAGTCAGATGTCGTACCAGGTAGTGGGCTTCTT
CATTTGAGGCTGGCTCTTGGTTAGCTTGATCTTGCCGTGGGTGTGGGTGC
CTATTTTTGGCGGGAACTTCCGTGTGCACCTCCTGTACCTATTTTGCGAC
CGCGAGCGGGATCGGAGTATAGAGGCACAGGACCCCGCCCTTATTTGGTC
TTTTTTCGGTTTTTTATCTTCACATGCGGCAAAAACGAGTAAGTATTGTG
GTTGCTTTGTCGTCCTGACTTGTCAAAAAGAAGAGTCCTTCCTTCAAGGC
TTGTCATATTTTTGGTGGGAGCTTCCGTGTGCACCTGCTTAACCTCTTCT
GCGACCGCGACCGGGATTGGAGTAGAGACGCCGGTCGTCTGCATGCGTGA
TAAAAAAGAGGTATATATACAATATAAACAATGTCCCTCCTTATCGGCGT
TTCCCCCCCCCTCCCAAAACAATGAAACGGTTTCTTGCAGGGTTGCGAAG
CGGCCCGAAACACTGAGCGTGCCATCCGCACCAGGCAGGACACAGCGAGG
AAAGTCCGCGGAACTCCCGGAACAGTCCGCGGAGCGCCCCGAACAATCCG
CGGAACGTCAGGAACAGTTCGCGGAACGTCAGGAACAGTTCACTGAACGC
CCGGAACCGGAGCACTTGGAACAGTCCGCGGAGCGCGACTCGCTCTGTTT
CCTCAGCGACAACAAGGGGCAAGATGAAGTTAAAATGGCCCCGGGGACAG
G back to topCoding sequence (CDS) from alignment at S-dermatodea_contig8596:5087..7937+ >mRNA_S-dermatodea_contig8596.16752.1 ID=mRNA_S-dermatodea_contig8596.16752.1|Name=mRNA_S-dermatodea_contig8596.16752.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1200bp|location=Sequence derived from alignment at S-dermatodea_contig8596:5087..7937+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCAGTCGTATCCTGCTCATCGTCTTCCGTCGCTCTGAAGGAGTTCATACA
CCGTGTCCGCGTCGACTCTGGGGGCGGGGACCAATGCCTATCATCCCCTA
CCCTCCGCATTGCGGACTTGGACATGGAAGAGGAGGTGGTTTTGGTGGAA
GGTCGTGCTCCAGTGATTGCTCAGCCAGTCGTATCCTGCTCATCGTCTTC
CGTCGCTCTGAAGGAGTTCATACACCGTGTCCGCGTCGACTCTGGGGGCG
GGGACCAATGCCTATCATCCCCTACCCTCCGCATTGCGGACTTGGACATG
GAAGAGGAGGTGGTTTTGGTGGAAGGTCGTGCTCCAGTGATTGCTCAGGA
GACGTCCATCAACGACAAAGGAGTTGGTGTAGAAAGAGAGGGATCACGTT
TGGACGGGACTCGCCCAGGGATTCCCCATTCCAACCAATCAGAACGCGCC
CGGTGGGAAAGTTCCAACCAATCAGAGTCGGGCTGGGTTGGTTCGGCGCG
TTCGGGGGTTAACAGGAGACGTCCATCAACGACAAAGGAGTTGGTGTAGA
AAGAGAGGGATCACGTTTGGACGGGACTCGCCCAGGGATTCCCCATTCCA
ACCAATCAGAACGCGCCCGGTGGGAAAGTTCCAACCAATCAGAGTCGGGC
TGGGTTGGTTCGGCGCGTTCGGGGGTTAACAGGGTTGCGAAGCGGCCCGA
AACACTGAGCGTGCCATCCGCACCAGGCAGGACACAGCGAGGAAAGTCCG
CGGAACTCCCGGAACAGTCCGCGGAGCGCCCCGAACAATCCGCGGAACGT
CAGGAACAGTTCGCGGAACGTCAGGAACAGTTCACTGAACGCCCGGAACC
GGAGCACTTGGAACAGTCCGCGGAGCGCGACTCGCTCTGTTTCCTCAGCG
ACAACAAGGGGCAAGATGAAGTTAAAATGGCCCCGGGGACAGGTTGCGAA
GCGGCCCGAAACACTGAGCGTGCCATCCGCACCAGGCAGGACACAGCGAG
GAAAGTCCGCGGAACTCCCGGAACAGTCCGCGGAGCGCCCCGAACAATCC
GCGGAACGTCAGGAACAGTTCGCGGAACGTCAGGAACAGTTCACTGAACG
CCCGGAACCGGAGCACTTGGAACAGTCCGCGGAGCGCGACTCGCTCTGTT
TCCTCAGCGACAACAAGGGGCAAGATGAAGTTAAAATGGCCCCGGGGACA back to top
|