mRNA_S-dermatodea_contig8588.16748.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8588.16748.1 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE) HSP 1 Score: 932 bits (2410), Expect = 0.000e+0 Identity = 540/942 (57.32%), Postives = 648/942 (68.79%), Query Frame = 1
Query: 307 SPEETKALQERLRGLEFPNCEDGTGK-YGEKTIDNAVAMVKAVPLFTRGFDVRRDNRTKLMTKAQEESSGKRNRWNCVSIICVHARGPRERERVANEKARRKTQTKKVGCTFKVGLWWAANNLAPKVAK-EICLAHHTPSSGGKEHARPRTFDKEMTADEVKQQSDFIVQLARGGVNTANIHRALQSNGKRLGPEGKSMVRSIRYSSGAGQSPEAGPAFNDAQQFLEQLQKSDAHMWFRADEQGRITCIAWAHEVQKANAVRYHPVIITDTTFNTNRYKFSLALIVVVDRENHSQIAMQALLSNEGSESFEFVFESFKELCEGETPQVVYTDADRASMNAIETVYPGALNKLCLWHTYENIREHGGGLGEGVLPEVIRKFKTAAYAQTVEYFLQAKAELLALLPPEGKMYEYMAENIFGPGRVEKWASCVHPGLHTLGIASTQRVESMNAAVKNLVTRAGNMVDLNRALQGKVQDDANKTRRRSEGGRVTRVPLRNV-SSMENVKHNLLKHFSFVLDALEHEKCSRHAVQDTEAQVVAALGYNATLLVSGEDEARGLLDKLADDPSKAKLWYDTSSGELMDPSRPTTTADGVSMVSRTSVPHFADILRDQKVNAVVRITMITPASEFGHLVALGPDGFFLCTCLRQLVHGLLCPHGIKALWHQKIDRFNGASIAPRWRESDTRWPMAALAAKPARLSAGAAESADL--PIGVDPNPIVSSPSGPNVRAYAYANGVALGKELGGMFKEITSLAGIHRTIETIKIFAQQQIEVEKRSQRDHSTTRVFRGIVSQPVEDLPPGDAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQTGAAGDSATETPGPVAGVTPSPPPAVAGGAARVDLQMLPIDGSHTLQGGGVPLRCLSNVGVPIGGGGQA-SPLLAP-----LEQLQAPPVCLATGRSKRHKK 3099
SPE+ LQ + L FPN E G+ + +GE TI+NAV M+KA RG+ ++R N+TKL T+ QE G+RNRWN V I+C A PR RERVAN ARR T ++K+GC F+VGLWWAAN+ AP VAK ++CL HHT +SGGKEH RPR + EM+ E++ + DF+ +L V T IH+ L+ GKRLG GK VR++ A + E G AFNDAQ + LQ ++A + F+ E GR+TCIAWA + QK A+RYH +II D TFNTN YKF LALIVVVD+ENH+QIAMQALL+NE SESFEF+FESFKELC G +P VV+TD D A+M AI VYP ALNKLC+WHT ENIR+HG GL EGVLP V+ KFK AAYAQT EYFLQ + E+L +LPPE MY+YMA NIFG R KWAS VHPGLHTLGIASTQRVESMNAAVK +VTR G+M+DLN + KVQD KT RRS GG+V +V +R S+M V + + F F+LDAL HEK S HA++DTEAQ+VAAL Y +VS D AR LLD L DP++AKL YDT SGEL+DPS T A G++MVSRTSVPHFAD+LR Q V+AVVRI+ ITP SEFGHLVA+G DGFFLCTCLRQLV+GLLCPH IKALW Q+I RFNGASI P WR+S T W M ALAA+PARLS GAA + P+ +P+ I S SGP + AY YANG++LGKELG +FKE+ S+AGIHR ++T+ FA+QQ+EVEKRS R S RVF G SQP G A XXXXXXXXXXXXXXXX AT T PV+GV P AG + P +G+HT QG G PLR L+NV GGGGQA SP P +E L P TG+SKRHK+
Sbjct: 83 SPEDLATLQGEVENLLFPNLEQGSQQQFGEATIENAVGMLKAK--IGRGYPLQRHNKTKLYTRKQEAEHGRRNRWNYVEIVCPQAGSPRARERVANASARRNTSSEKIGCAFEVGLWWAANSPAPIVAKGKLCLTHHTKTSGGKEHERPRAIENEMSVAEIEAKRDFLRELHASRVKTTEIHKTLERVGKRLGQAGKQKVRTMMAQFDAERQAENG-AFNDAQLLVGHLQNTEAFLRFK-HEDGRMTCIAWASQDQKVLAMRYHKIIIQDNTFNTNVYKFFLALIVVVDKENHTQIAMQALLANERSESFEFIFESFKELCGGGSPGVVFTDCDSAAMLAIANVYPSALNKLCIWHTMENIRDHGRGLAEGVLPAVLGKFKAAAYAQTQEYFLQLRGEILDMLPPESHMYKYMAVNIFGAERAGKWASYVHPGLHTLGIASTQRVESMNAAVKAVVTRKGSMMDLNDGIMAKVQDGMAKTERRSTGGKVNKVSMRQAKSAMSRVTTSHVDQFRFILDALAHEKSSTHAMEDTEAQIVAALTYQDRTVVSDADAARRLLDDLVADPAQAKLVYDTRSGELVDPSHETPDASGITMVSRTSVPHFADLLRGQNVDAVVRISKITPPSEFGHLVAVGSDGFFLCTCLRQLVYGLLCPHVIKALWSQRITRFNGASIGPWWRDSSTPWTMEALAARPARLSTGAAGAHGQVPPLVGNPDAIGSLDSGPKLSAYGYANGLSLGKELGALFKEVGSVAGIHRVVDTVFNFARQQVEVEKRSLRQESRGRVFTGTFSQPTTVTGRGGASSRGGRGSTGTGRGDRGXXXXXXXXXXXXXXXXVGL----------ATGTSSPVSGVPTVQNPVAAGAVPAPSVLQTPANGAHTFQGLGTPLRSLNNVD--FGGGGQARSPPQEPAHLMHMEHLHPPLAQKQTGQSKRHKR 1008
BLAST of mRNA_S-dermatodea_contig8588.16748.1 vs. uniprot
Match: A0A6H5JB23_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB23_9PHAE) HSP 1 Score: 897 bits (2318), Expect = 3.130e-315 Identity = 468/731 (64.02%), Postives = 545/731 (74.56%), Query Frame = 1
Query: 337 RLRGLEFPNCEDGTGKYGEKTIDNAVAMVKAVPLFTRGFDVRRDNRTKLMTKAQEESSGKRNRWNCVSIICVHARGPRERERVANEKARRKTQTKKVGCTFKVGLWWAANNLAPKVAKE---------ICLAHHTPSSGGKEHARPRTFDKEMTADEVKQQSDFIVQLARGGVNTANIHRALQS-NGKRLGPEGKSMVRSIRYSSGAGQSPEAGPAFNDAQQFLEQLQKSDAHMWFRADEQGRITCIAWAHEVQKANAVRYHPVIITDTTFNTNRYKFSLALIVVVDRENHSQIAMQALLSNEGSESFEFVFESFKELCEGETPQVVYTDADRASMNAIETVYPGALNKLCLWHTYENIREHGGGLGEGVLPEVIRKFKTAAYAQTVEYFLQAKAELLALLPPEGKMYEYMAENIFGPGRVEKWASCVHPGLHTLGIASTQRVESMNAAVKNLVTRAGNMVDLNRALQGKVQDDANKTRRRSEGGRVTRVPLRNVSSMENVKHNLLKHFSFVLDALEHEKCSRHAVQDTEAQVVAALGYNATLLVSGEDEARGLLDKLADDPSKAKLWYDTSSGELMDPSRPTTTADGVSMVSRTSVPHFADILRDQKVNAVVRITMITPASEFGHLVALGPDGFFLCTCLRQLVHGLLCPHGIKALWHQKIDRFNGASIAPRWRESDTRWPMAALAAKPARLSAGAAESADLPIGV------DPNPIVSSPSGPNVRAYA 2481
++R L FPN EDGTG+YGEKT++ AV MVKAVP FTRGF+V R ++++ VGC FK LWW A AP V K +CL HHTP+S GKEHA P TFD EM+ ++ + SDFI+ LA GV T ++H+ +Q +GKRLG EGK++VR I ++ AFNDAQ+FL LQ+S AH+WFRAD Q RIT IAWA +VQKA AVR+H VIITDTTFNTNRYKFSLAL+VVVD ENHSQI MQALLSNE ESF+FV+ES KELCEG +P+V ++D D A NAIE V+PG ++KLC+WHTY NIREHGGGLGEGVL EVIRKF+ AA+AQTVEYFLQAK ELLA LP E KMY YMA NIFG GRVEKWASCVHPGLHTLGI STQRVE+MN+AVK LVTR+G MV+LNRAL GKVQDDANKT+R+S+GGR+ R PL ++SSMENVK LLKHFSFV+DA++HE+ S HA++DTEAQVVAALGYNAT LV GEDEAR LLD+L D KAKLWYDTSSG+L+DP + TT A GVSMVSRTSVPHFA +LRDQ VN+VVR++MITP SEFGHLVALGPDGFFLCTCLRQL HGLLCPHG+KA+W + +DRFNGA+I+PRWRES+T W MA LAAKPA LSAG A SA LP+ V DPN S SGPNV +YA
Sbjct: 42 QVRELVFPNLEDGTGEYGEKTLNKAVEMVKAVPGFTRGFEVTRVSKSR------------------------------------------------VGCNFKTVLWWGARQDAPVVGKASLSALAEGGMCLTHHTPTSNGKEHAPPTTFDNEMSRQDIYEMSDFIIDLADSGVKTVDLHKTVQQKSGKRLGREGKALVRCIVEK----HLEDSREAFNDAQEFLAHLQRSKAHLWFRADNQSRITSIAWASDVQKAAAVRFHSVIITDTTFNTNRYKFSLALVVVVDHENHSQIVMQALLSNERQESFQFVYESLKELCEGGSPKVCFSDNDAAETNAIELVFPGTVHKLCIWHTYGNIREHGGGLGEGVLSEVIRKFRKAAFAQTVEYFLQAKTELLAFLPRESKMYNYMANNIFGKGRVEKWASCVHPGLHTLGICSTQRVEAMNSAVKRLVTRSGTMVELNRALMGKVQDDANKTKRKSDGGRLPRAPLSSMSSMENVKRGLLKHFSFVVDAVKHERSSTHAIKDTEAQVVAALGYNATCLVRGEDEARLLLDELVADADKAKLWYDTSSGDLIDPLQATTGAAGVSMVSRTSVPHFAHLLRDQNVNSVVRVSMITPPSEFGHLVALGPDGFFLCTCLRQLEHGLLCPHGLKAMWTEGVDRFNGATISPRWRESETPWLMADLAAKPATLSAGLAASAGLPVAVSQPPRVDPNSTASR-SGPNVPSYA 719
BLAST of mRNA_S-dermatodea_contig8588.16748.1 vs. uniprot
Match: A0A6H5JDT4_9PHAE (MULE domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT4_9PHAE) HSP 1 Score: 677 bits (1746), Expect = 7.000e-228 Identity = 351/660 (53.18%), Postives = 458/660 (69.39%), Query Frame = 1
Query: 715 PSSGGKEHARPRTFDKEMTADEVKQQSDFIVQLARGGVNTANIHRALQSNGKRLGPEGKSMVRSIRYSSGAGQSPEAGPAFNDAQQFLEQLQKSDAHMWFRADEQGRITCIAWAHEVQKANAVRYHPVIITDTTFNTNRYKFSLALIVVVDRENHSQIAMQALLSNEGSESFEFVFESFKELCEGETPQVVYTDADRASMNAIETVYPGALNKLCLWHTYENIREHGGGLGEGVLPEVIRKFKTAAYAQTVEYFLQAKAELLALLPPEGKMYEYMAENIFGPGRVEKWASCVHPGLHTLGIASTQRVESMNAAVKNLVTRAGNMVDLNRALQGKVQDDANKTRRRSEGGRVTRVPL-RNVSSMENVKHNLLKHFSFVLDALEHEKCSRHAVQDTEAQVVAALGYNATLLVSGEDEARGLLDKLADDPSKAKLWYDTSSGELMDPSRPTTTAD-GVSMVSRTSVPHFADILRDQKVNAVVRITMITPASEFGHLVALGPDGFFLCTCLRQLVHGLLCPHGIKALWHQKIDRFNGASIAPRWRESDTRWPMAALAAKPARLSAGAAESADLPIGVDPNPIVS---SPSGPNVRAYAYANGVALGKELGGMFKEITSLAGIHRTIETIKIFAQQQIEVEKRSQRDHSTTRVFRGIVSQPVEDL 2679
P S G EH PR F+ E+T ++++ +S I ++ GV TA +++ L GKRLG +G+ MVR +R ++ G NDAQQ L QL++ A ++ D++ R+TC+AWAHE Q+ N +Y PV+++DTTFNT++Y LA IVVVD+ENH+QIAMQALL E ESF F+ ESFKEL G +P+V++TD D++ M+AI V+PGALNKLC WH +N++ HG GL G+L ++RKFK AAYA T+E F++ K ELL++L PE +Y+YM IF PGR KWAS VHPGLHTLGIASTQRVE N AVK LVTR G++ DL RAL GKVQDDA +T+RRSE G RV L RN+S ENVK NL +F+F+ AL HE+CS HA +DT + A LGY+ ++ SGE + R +L DDP+K L DT+SGE +DP+ PT A GV + SR V HFA +LRDQ V+ +VR+ ++ EF HLVALGPDGFFLCTCLR LV+GLLCPHG+KA++ ++FNGASIAPRWRES T W + LAAKPA L GAAE P+ + P + + S SG NV+A AYANG GK++G + ++IT+L GI R +E+ KIF +QQ+EVEKRSQR STT+VF G S P +
Sbjct: 3 PGSEGTEHDPPRVFENEITREDLEAESAHIKKMCDKGVKTAEVYKYLTDTGKRLGEKGRQMVRLMRVQFDKDKTSSRG-GLNDAQQLLHQLEQDGAFKRYKLDDENRLTCLAWAHEEQRRNTEKYFPVVVSDTTFNTSKYNHKLAFIVVVDKENHTQIAMQALLDTERHESFVFLMESFKELIRGSSPKVIFTDTDQSEMSAIAQVFPGALNKLCYWHKEQNVKAHGKGLPGGILQGILRKFKAAAYAPTLEAFVEIKTELLSMLDPESGVYKYMLGEIFNPGRAGKWASFVHPGLHTLGIASTQRVEGTNCAVKKLVTRTGDLADLERALLGKVQDDAIRTQRRSEVGNTKRVSLSRNMSPAENVKQNLRGYFAFITAALTHERCSTHAKEDTGVMIDACLGYSTKIVASGETDVRRILQMFVDDPTKVNLMLDTNSGEFIDPAEPTAVAPAGVHLASRAPVSHFAGLLRDQAVDKLVRVALLQ-REEFCHLVALGPDGFFLCTCLRPLVYGLLCPHGLKAMFDTGANKFNGASIAPRWRESSTPWTLEPLAAKPAMLDPGAAEC---PVELPPFNVTTDDISHSGTNVKAAAYANGTNFGKDMGVLLRQITTLEGIDRVLESTKIFFKQQLEVEKRSQRQASTTQVFTGTFSHPTSGM 657
BLAST of mRNA_S-dermatodea_contig8588.16748.1 vs. uniprot
Match: A0A6H5KQ14_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ14_9PHAE) HSP 1 Score: 607 bits (1566), Expect = 1.240e-204 Identity = 323/546 (59.16%), Postives = 390/546 (71.43%), Query Frame = 1
Query: 1006 MWFRADEQGRITCIAWAHEVQKANAVRYHPVIITDTTFNTNRYKFSLALIVVVDRENHSQIAMQALLSNEGSESFEFVFESFKELCEGETPQVVYTDADRASMNAIETVYPGALNKLCLWHTYENIREHGGGLGEGVLPEVIRKFKTAAYAQTVEYFLQAKAELLALLPPEGKMYEYMAENIFGPGRVEKWASCVHPGLHTLGIASTQRVESMNAAVKNLVTRAGNMVDLNRALQGKVQDDANKTRRRSEGGRVTRVPLRNVSSMENVKHNLLKHFSFVLDALEHEKCSRHAVQDTEAQVVAALGYNATLLVSGEDEARGLLDKLADDPSKAKLWYDTSSGELMDPSRPTTTADGVSMVSRTSVPHFADILRDQKVNAVVRITMITPASEFGHLVALGPDGFFLCTCLRQLVHGLLCPHGIKALWHQ----KIDRFNGASIAPRWRESDTRWPMAALAAKPARLSAGAAESADLPIGVDPNPIVSSPSGPNVRAYA----YANGVALGKELGGMFKEITSLAGIHRTIETIKIFAQQQIEVEKRSQ 2619
M F+ DE RI CIAWA+ Q+ NA RYH VI+ D TFNTN YKF LALIVVVD EN++QIAMQALLSNE SE F F+ E+FKELC G PQV +TD D+ +M AI V+PGALNKLC+W+ +NIR+HG GL +G L V++ FK AA+A VE F++ K EL LLP E M++YM IFG GRVEKWASCVHPGLH LGIASTQR E+ A+K +VTR GNMVDLNRAL KVQDDA KT+ R++GG VTRVP+R VS E+VK + L+HFSFV +A+EHE+CSRHA +D E Q+ AA GY A + +G+D R LL +L DP+KA L YD SGE +DP V+M +RTSV HFAD+L DQ V +VRIT+ SEFGHLVALGPDGFFLCTCLR LV+GL CPH IKAL H K+ FN A I+PRWR+S+T W MA LAAKPARL+ AE A LP+ +DPN +V S S V A YA+ V+ GK++GG + ITS AGI R +E+ F QQ+EVEKRSQ
Sbjct: 1 MKFKMDEHNRIKCIAWAYPEQEQNARRYHRVILQDNTFNTNVYKFFLALIVVVDMENYTQIAMQALLSNERSEDFIFLMETFKELCGGLMPQVAFTDCDQGAMGAIAEVFPGALNKLCIWYAMQNIRKHGKGLADGALQSVLQNFKAAAFAARVEDFVRYKTELPRLLPQESAMHKYMEGTIFGAGRVEKWASCVHPGLHKLGIASTQRCEATFTALKLVVTRNGNMVDLNRALLSKVQDDAIKTQSRNKGGAVTRVPVRKVSPQESVKASFLRHFSFVFEAMEHERCSRHAKEDVEEQIFAAFGYEAVTVATGQDAVRTLLAELVADPTKANLAYDICSGEFIDPGGEAAGPAHVTMATRTSVAHFADLLHDQNVEELVRITIFNAQSEFGHLVALGPDGFFLCTCLRMLVYGLPCPHCIKALAHMRGNDKVFSFNAACISPRWRDSETSWTMAHLAAKPARLATADAELAGLPV-IDPNSVVVSYSSATVAATVAAAGYADAVSYGKKMGGKLRGITSSAGIQRVLESTYDFFLQQLEVEKRSQ 545
BLAST of mRNA_S-dermatodea_contig8588.16748.1 vs. uniprot
Match: D7G8C7_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C7_ECTSI) HSP 1 Score: 590 bits (1522), Expect = 1.920e-196 Identity = 313/481 (65.07%), Postives = 369/481 (76.72%), Query Frame = 1
Query: 898 VRSIRYSSGAGQSPEAGPAFNDAQQFLEQLQKSDAHMWFRADEQGRITCIAWAHEVQKANAVRYHPVIITDTTFNTNRYKFSLALIVVVDRENHSQIAMQALLSNEGSESFEFVFESFKELCEGETPQVVYTDADRASMNAIETVYPGALNKLCLWHTYENIREHGGGLGEGVLPEVIRKFKTAAYAQTVEYFLQAKAELLALLPPEGKMYEYMAENIFGPG-----------------------RVEKWASCVHPGLHTLGIASTQRVESMNAAVKNLVTRAGNMVDLNRALQGKVQDDANKTRRRSEGGRVTRVPLRNVSSMENVKHNLLKHFSFVLDALEHEKCSRHAVQDTEAQVVAALGYNATLLVSGEDEARGLLDKLADDPSKAKLWYDTSSGELMDPSRPTTTADGVSMVSRTSVPHFADILRDQKVNAVVRITMITPASEFGHLVALGPDGFFLCTCLRQLVHGLLCPHGIK 2271
VRS+R + A + + G FNDAQ F+ LQ+S+A M F+ADEQGRIT IAWA++ QK NAVRYH VI+ D TFNTN YKF LALIVVVD+ENHSQIAMQALLS+E SESFEFVFESFK+LCEG TP+VV+TD D A+M AI VYP ALNKLC+WHT NIREHGGGL +GVL +V++ FK AAYAQT EYFLQ K LL LLPPE KMYEYM +NIFG G R KWAS VHPGLHTLGIASTQRVESMNAAVK LVTR G+MVDL RAL GKVQDD N+T+RR+ GG V RV ++ S +E+ + L+ F+FVL+A+++E+CS+HA +DTEAQ++ AL Y A +V E+ AR L ++L DP+KA L YDT SGEL+DPS PT+ A GVSMVSRTSVPHFA++LRDQ V+ VVRIT ++ ASE GHLVALGPDGFFLCTCLRQLV+GLLCPH IK
Sbjct: 3 VRSMRDAFDAERKADNG-VFNDAQLFVSHLQQSEAFMRFKADEQGRITSIAWAYQQQKYNAVRYHSVIVQDNTFNTNIYKFHLALIVVVDKENHSQIAMQALLSDERSESFEFVFESFKQLCEGGTPEVVFTDCDAAAMLAIAKVYPSALNKLCIWHTMGNIREHGGGLEKGVLGQVLQLFKAAAYAQTEEYFLQCKGALLDLLPPESKMYEYMEKNIFGTGFRQLVTSSVSCPLSLSRPVTCDRRAGKWASYVHPGLHTLGIASTQRVESMNAAVKKLVTRKGDMVDLGRALLGKVQDDINRTQRRNLGGTVARVAVQGHSYVESFRTKHLRTFNFVLNAVKYEQCSQHATEDTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAAGVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIK 482
BLAST of mRNA_S-dermatodea_contig8588.16748.1 vs. uniprot
Match: A0A6H5JRX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRX3_9PHAE) HSP 1 Score: 545 bits (1403), Expect = 3.180e-181 Identity = 338/530 (63.77%), Postives = 382/530 (72.08%), Query Frame = 1
Query: 1525 MYEYMAENIFGPGRVEKWASCVHPGLHTLGIASTQRVESMNAAVKNLVTRAGNMVDLNRALQGKVQDDANKTRRRSEGGRVTRVPLRNVSSMENVKHNLLKHFSFVLDALEHEKCSRHAVQDTEAQVVAALGYNATLLVSGEDEARGLLDKLADDPSKAKLWYDTSSGELMDPSRPTTTADGVSMVSRTSVPHFADILRDQKVNAVVRITMITPASEFGHLVALGPDGFFLCTCLRQLVHGLLCPHGIKALWHQKIDRFNGASIAPRWRESDTRWPMAALAAKPARLSAGAAESADLPIGVDPNPIVSSPSGPNVRAYAYANGVALGKELGGMFKEITSLAGIHRTIETIKIFAQQQIEVEKRSQRDHSTTRVFRGIVSQPVEDLPPGDAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQTGAAGDSATETPGPVAGVTPSPPPAVAGGAARVDLQMLPIDGSHTLQGGGVPLRCLSNVGVPIGGGGQASPLLAPLEQLQAPPVCLATGRSKRHKKSSSGG 3114
MY+YMA N RVEKWASCVHPGLHTLGI STQRVESMN+AVK LVTRAG MVDLNRAL GKVQDDANKT+RR LL+HFSFV++A+++E+CS A++DTEAQVVAA+GYNAT LV GE EA LLD+LA +P+KAKL YDTSSGEL+DPS+PTT A GVS VSRTSVPHFAD+LRDQ VNAVVR++MI P SEFGHLVALGPDGFFLCTCLRQLV+GLLCPHG+KALW + + F GA+I+PRW P A SAG P DPN VS +GPNV +YAY NGVALGKELGGMFKEI +LAGIHR +ETIK+FA+ Q+++EKRSQ +HST RVFRG+ SQP EDLP GDAGG XXXXXXXXXXXXXXXXXXXXXXXX TG TPGP AG + PPA GGA P+ G+H LQG GVPL LSNV VP G G Q SPLLA LEQ+QAPPV G KRHK S++GG
Sbjct: 1 MYDYMA-NKHLRRRVEKWASCVHPGLHTLGICSTQRVESMNSAVKRLVTRAGIMVDLNRALMGKVQDDANKTKRRG----------------------LLQHFSFVVNAVKNERCSTRAIEDTEAQVVAAIGYNATCLVRGEGEAWRLLDELAANPAKAKLCYDTSSGELIDPSQPTTEAPGVSTVSRTSVPHFADLLRDQNVNAVVRVSMIAPPSEFGHLVALGPDGFFLCTCLRQLVYGLLCPHGLKALWAEGVVSFKGATISPRW-------PAA---------SAGLPAGVGQPPRADPNSTVSR-TGPNVPSYAYTNGVALGKELGGMFKEINNLAGIHRAMETIKLFARAQVDLEKRSQDEHSTNRVFRGVFSQPAEDLPSGDAGGTGRGPGRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXATGV------RTPGPGAGDSSFHPPAAVGGAVP------PVSGAHPLQGAGVPLGSLSNVAVPGGAGRQPSPLLA-LEQVQAPPVLRQKGPRKRHKSSAAGG 477
BLAST of mRNA_S-dermatodea_contig8588.16748.1 vs. uniprot
Match: A0A6H5JMC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC6_9PHAE) HSP 1 Score: 532 bits (1371), Expect = 3.100e-173 Identity = 431/1049 (41.09%), Postives = 499/1049 (47.57%), Query Frame = 1
Query: 13 PFPADLATPFPLTALMRSSGTSTEPHGADGEGEDIVVVDAGSEDEAGDGEGEASDDTIGSRGGEAPGFSAGEGNATPAAEGGPGLAGESP----SDARPTELSPEETKALQERLRGLEFPNCEDGTGKYGEKTIDNAVAMVKAVPLFTRGFDVRRDNRTKLMTKAQEESSGKRNRWNCVSIICV-HARGP---RERERVANEKARRKTQTKKVGCTFKVGLWWAANNLAPKVAKE-ICLAHHTPSSGGKEHARPRTFDKEMTADEVKQQSDFIVQLARGGVNTANIHRALQSNGKRLGPEGKSMVRSIRYSSGAGQSPEAGPAFNDAQQFLEQLQKSDAHMWFRADEQGRITCIAWAHEVQKANAVRYHPVIITDTTFNTNRYKFSLALIVVVDRENHSQIAMQALLSNEGSESFEFVFESFKELCEGETPQVVYTDADRASMNAIETVYPGALNKLCLWHTYENIREHGGGLGEGVLPEVIRKFKTAAYAQTVEYFLQAKAELLALLPPEGKMYEYMAENIFGPGRVEKWASCVHPGLHTLGIASTQRVESMNAAVKNLVTRAGNMVDLNRALQGKVQDDANKTRRRSEGGRVTRVPLRNVSSMENVKHNLLKHFSFVLDALEHEKCSRHAVQDTEAQVVAALGYNATLLVSGEDEARGLLDKLADDPSKAKLWYDTSSGELMDPSRPTTTADGVSMVSRTSVPHFADILRDQKVNAVVRITMITPASEFGHLVALGPDGFFLCTCLRQLVHGLLCPHGIKALWHQKIDRFNGASIAPRWRESDTRWPMAALAAKPARLSAGAAESADLPIGV------DPNPIVSSPSGPNVRAYAYANGVALGKELGGMFKEITSLAGIHRTIETIKIFAQQQIEVEKRSQRDHSTTRVFRGIVSQPVEDLPPGDAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQTGAAGDSATETPGPVAGVTPSPPPAVAGGAARVDLQMLPIDGSHTLQGGGVPLRCLSNVGVPIGGGGQASPLLAPLEQLQAPPVCLATGRSKRHKKSSSGG 3114
P P A+P PL ALM S GTST+ HGADGEGED+VV G EDEAG DTI S SA + TPAA GP +DA E SP E A+++++R L FPN EDGTG+YGEKT+++AV MVKAVP FTRGF+V R ++++ + E +CV H R P R RERVANEK +KT + K+GC FK LWW+A + AP VA+ +CL HHTPSS GKEHARPRT EM+ +++ HTLGI STQRVESM++AVK LVTRAG MVDLN+AL GKVQDDANK++R LL+HFSFV+DA++ E+CS HA++DTEAQVVAALGYNAT LV GEDEAR LLD+LA DP+KAKL YDTSSGE D+LRDQ VNAVVR++MI P SE GHLVALGPDGFFLCTCLRQLV+GLLCPHG+KALW + + PA L+AGAA SA LP GV DPN VS SGPNV YAYANGVALGKELGGMFKEI +LAGIHR +ETIK+FA+ Q++VEKRSQ +HST RVFRG+ SQP EDLP GDAGG XXXXXXXXXXXXXXXXXXXXXXXX TG TPGP AG + PA GGA P+ G+H LQG GVPL LSNV VP G G Q SPLLA LEQ+QAPPV G SKRHK S++GG
Sbjct: 36 PCPVGGASPSPLAALMSSRGTSTKTHGADGEGEDMVVHVGGGEDEAGG-------DTIASGXXXXXXSSA---DNTPAAAEGPXXXXXXXXXXXADAALPEPSPGEIAAIEKQVRELIFPNLEDGTGEYGEKTLNSAVEMVKAVPGFTRGFEVTRVSKSRGEAQQME--------------LCVDHLRPPGEPRRRERVANEKDGKKTSSSKLGCKFKTVLWWSAKSDAPVVAQGGMCLTHHTPSSDGKEHARPRTCGNEMSREDI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HTLGICSTQRVESMSSAVKRLVTRAGTMVDLNQALMGKVQDDANKSKR----------------------CGLLRHFSFVVDAMKDERCSTHAIEDTEAQVVAALGYNATCLVRGEDEARRLLDELAADPAKAKLCYDTSSGE--------------------------DLLRDQNVNAVVRVSMIAPPSELGHLVALGPDGFFLCTCLRQLVYGLLCPHGLKALWAEGV---------------------------PASLTAGAAASAGLPAGVGQPPRADPNSTVSR-SGPNVPTYAYANGVALGKELGGMFKEINNLAGIHRAMETIKLFARAQVDVEKRSQDEHSTNRVFRGVFSQPAEDLPSGDAGGTGRGPGRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXATGV------RTPGPGAGDSSFHSPAAVGGAVP------PVSGAHPLQGAGVPLGPLSNVAVPGGAGRQPSPLLA-LEQVQAPPVLRQRGPSKRHKSSAAGG 698
BLAST of mRNA_S-dermatodea_contig8588.16748.1 vs. uniprot
Match: A0A6H5JGY2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY2_9PHAE) HSP 1 Score: 490 bits (1262), Expect = 1.080e-151 Identity = 287/463 (61.99%), Postives = 333/463 (71.92%), Query Frame = 1
Query: 1747 RSEGGRVTRVPLRNVSSMENVKHNLLKHFSFVLDALEHEKCSRHAVQDTEAQVVAALGYNATLLVSGEDEARGLLDKLADDPSKAKLWYDTSSGELMDPSRPTTTADGVSMVSRTSVPHFADILRDQKVNAVVRITMITPASEFGHLVALGPDGFFLCTCLRQLVHGLLCPHGIKALWHQKIDRFNGASIAPRWRESDTRWPMAALAAKPARLSAGAAESADLPIGV------DPNPIVSSPSGPNVRAYAYANGVALGKELGGMFKEITSLAGIHRTIETIKIFAQQQIEVEKRSQRDHSTTRVFRGIVSQPVEDLPPGDAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQTGAAGDSATETPGPVAGVTPSPPPAVAGGAARVDLQMLPIDGSHTLQGGGVPLRCLSNVGVPIGGGGQASPLLAPLEQLQAPPVCLATGRSKRHKKSSSGGR 3117
R+ GGR+ R PL VSSMENV+ LL+HFSFV+DA+++E+CS HA++DTEAQVVA LGYNAT LV GEDEAR LLD+LA DP+KAKLWYDTSSG+ MDPS+PTT A GVSMVSRTSVPH AD+LRDQ VNAVVR++MITP SE+ HLVALGPDGFFLCTCLRQLV+GLLCPHG++ALW + + FNGA I+PRWRES+T W MA LAAKPA LSA AA SA LP GV DPN VS SGPNV +Y YANGVALGK+LGGMFKEI +LAGIHR +ETIK+FA+ Q++++KRSQ HST RVFRG+ SQP ED+P GDAGG XXXXXXXXXXXX PPA GGA + + G+HTLQG G+PL LSNV VP G G Q PL L+Q QAPPV GRSKRH+ S++GGR
Sbjct: 713 RNGGGRLPREPLPCVSSMENVRRGLLRHFSFVVDAVKNERCSTHAIEDTEAQVVATLGYNATCLVRGEDEARRLLDELAADPAKAKLWYDTSSGDPMDPSQPTTEAPGVSMVSRTSVPHVADLLRDQNVNAVVRVSMITPLSEYSHLVALGPDGFFLCTCLRQLVYGLLCPHGLEALWAEGVVSFNGAIISPRWRESETPWLMAELAAKPASLSARAATSAGLPAGVGQPPRVDPNSTVSR-SGPNVPSYTYANGVALGKKLGGMFKEINNLAGIHRAMETIKLFARGQVDLDKRSQEKHSTNRVFRGVFSQPAEDVPSGDAGGTGRGPGRGGRSGGGERGATGMGXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXPPAAVGGAVPL------VSGAHTLQGAGMPLGSLSNVAVPGGAGRQ--PLA--LDQEQAPPVLRQRGRSKRHESSAAGGR 1158
BLAST of mRNA_S-dermatodea_contig8588.16748.1 vs. uniprot
Match: A0A6H5KNT7_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNT7_9PHAE) HSP 1 Score: 416 bits (1070), Expect = 1.710e-129 Identity = 269/577 (46.62%), Postives = 334/577 (57.89%), Query Frame = 1
Query: 1129 RYKFSLALIVVVDRENHSQIAMQALLSNEGSESFEFVFESFKELCEGETPQVVYTDADRASMNAIETVYPGALNKLCLWHTYENIREHGGGLGEGVLPEVIRKFKTAAYAQTVE------------------YFLQAKAELLALLPPEGKMYEYMAENIFGPG----------RVEKWASCVHPGLHTLGIASTQRVESMNAAVKNLVTRAGNMVDLNRALQGKVQDDANKTRRRSEGGRVTRVPLRNVSSMENVKHNLLKHFSFVLDALEHEKCSRHAVQ-----------------------------------DTEAQVVAALGYNATLLVSGEDEARGLLDKLADDPSKAKLWYDTSSGELMDPSRPTTTADGVSMVSRTSVPHFADILRDQKVNAVVRITMITPASEFGHLVALGPDGFFLCTCLRQLVHGLLCPHGIKALWHQKIDRFNGASIAPRWRESD---TRWPMAALAAKPARLSAGAAESADLP---IGVDPNPIVSSPSGPNVRAYAYANGVALGKELGGMFKEITSLAGIHRTIETIKIFAQQQIEVEKRSQRDHSTTRVFRG 2652
RYKF +ALIVVVD+ENHSQIAMQALLS++ SE FE FESFK+LC+G TP VV+TD D A+M AI VYP ALN LC+WHT NIREHGGGL GVL +++ FK AAYAQT E L L+ + P + + + ++ P R +WAS VHPGLHTLGIASTQRVESMNAAVK LVTR G+ V L RAL GKVQDD N+++RR+ GG V RV ++ S +E+ + L+ F+FVL+A+ +E+CS+HA + DTEAQ++ AL Y A +V GE+ AR L ++L DP+KA L YDT SGEL+DPS PT+ A G SMVSRTSVPHFA++LRDQ V C R P A+ +DR +S + S R P A + + +AG A P + VDPNPIVSS SG N+ AYAYANGV LGKELGGMFKE+ S+A I R +E++K +QQIEVEKRS RD ST+RVF G
Sbjct: 6 RYKFHIALIVVVDKENHSQIAMQALLSDKRSEFFESAFESFKQLCKGGTPGVVFTDYDAAAMLAIAKVYPSALNNLCIWHTMGNIREHGGGLENGVLGQILGLFKAAAYAQTEEGKHRLEWQPMLSGPRSRDVLLLLLRRCLSPVSPVCRSRQLVTSSVSCPPSLSRPVTRDRRAGRWASYVHPGLHTLGIASTQRVESMNAAVKKLVTRKGDNVHLGRALLGKVQDDINRSQRRNLGGTVARVAVQGHSYVEDFRTKHLRTFNFVLNAVNYEQCSQHATEVSCGGLSLWPWTDPDLFSPITPNRAPLRCGMPCWRDTEAQILGALHYEAKPVVRGEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSDAAGFSMVSRTSVPHFAELLRDQNVTR-------------------------WCASRRS-------PRRPGAVTSSPLDRTASSSASACGSLSTGYFARTPSRPCACQASIGAAGLTGPAGPPGQMLPVDPNPIVSSQSGTNLSAYAYANGVTLGKELGGMFKEV-SVASIQRLVESMKHCTKQQIEVEKRSLRDESTSRVFTG 549
BLAST of mRNA_S-dermatodea_contig8588.16748.1 vs. uniprot
Match: A0A6H5KGZ7_9PHAE (MULE domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGZ7_9PHAE) HSP 1 Score: 405 bits (1041), Expect = 5.300e-127 Identity = 247/561 (44.03%), Postives = 328/561 (58.47%), Query Frame = 1
Query: 991 KSDAHMWFRADEQGRITCIAWAHEVQKANAVRYHPVIITDTTFNTNRYKFSLALIVVVDRENHSQIAMQALLSNEGSESFEFVFESFKELCEGETPQ-VVYTDADRASMNAIETVYPGALNKLCLWHTYENIREHGGGLGEGVLPEVIRKFKTAAYAQTVEYFLQAKAELLALLPPEGKMYEYMAENIFGPGRVEKWASCVHPGLHTLGIASTQRVESMNAAVKNLVTRAGNMVDLNRALQGKVQDDANKTRRRSEGGRVTRVPLRNVSSMENVKHNLLKHFSFVLDALEHEKCSRHAVQDTEAQVVAALGYNATLLVSGEDEARGLLDKLADDPSKAKLWYDTSSGELMDPSRPTTTADGVSMVSRTSVPHFADILRDQKVNAVVRITMITPASEFGHLVALGPDGFFLCTCLRQLVHGLLCPHGIKALWHQKIDRFNGASIAPRWRESDTRWPMAALAAKPARLSAGAAESADLPIGVDPNPIVSSPSGPNVRAYAYANGVALGKELGGMFKEITSLAGIHRTIETIKIFAQQQIEVEKRSQRDHSTTRVFRGIVSQPV 2670
K M F DE GRI IAWA + QK NA+RYH +II D TFNTN+YK+ LAL V VD+EN++ IAMQALL+NE +E FEF+F F+EL EG P+ V++TDAD A+M AI+ P + KLC +H EN+R+HG GLGEGVL VIR+F A AQT E+ K +L LL P MY YM + +F P V +WA HPGL TLGI+STQRVES NAA+K ++R+G MVD+NRA++GKV DD +N + M + + +AA+GY A L +G + + LL L +P+ A L Y+T+SG+ V++ +RTSV FA++LRDQ + +VR+T + + HLVALGPDGFFL TCLR LV GL C H ++ + H F GA IAPRWR+ W MA LAAKPA L+ A +P V S S VRA A+A+ A GK L + I ++ GI R ++ +K A+Q +EVE RSQ + ST+RVF+G+++ P
Sbjct: 2 KEGCWMRFTLDENGRINRIAWALDEQKTNALRYHSLIIQDNTFNTNQYKYHLALKVAVDKENYTHIAMQALLANERTEDFEFLFREFRELIEGAQPEYVIFTDADAATMAAIDKESPASRGKLCQFHMGENMRKHGKGLGEGVLAAVIRQFHKAGNAQTEEH----KEDLFKLLHPGSHMYTYMTDYVFVPKWVHRWAMYGHPGLPTLGISSTQRVESANAALKPAMSRSGTMVDVNRAIRGKVTDDT-----------------KNDTDMSD-------------------------------EALAAMGYKAETLATGNCDVQRLLADLVANPAGAGLLYETTSGD-------------VTLTTRTSVKFFAELLRDQVLERLVRVTNVGSQTNHCHLVALGPDGFFLYTCLRILVEGLGCGHALRTI-HDADLGFTGACIAPRWRDGIMPWTMAPLAAKPAVLATTATGVPGEMPAPPADPGVFSHSKTTVRASAWASCCAFGKRLATITAGIDNIPGISRVLDNLKNQARQMVEVELRSQNNASTSRVFKGVITTPT 496 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8588.16748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8588.16748.1 >prot_S-dermatodea_contig8588.16748.1 ID=prot_S-dermatodea_contig8588.16748.1|Name=mRNA_S-dermatodea_contig8588.16748.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=1040bp RHRNPFPADLATPFPLTALMRSSGTSTEPHGADGEGEDIVVVDAGSEDEAback to top mRNA from alignment at S-dermatodea_contig8588:2103..8724- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8588.16748.1 ID=mRNA_S-dermatodea_contig8588.16748.1|Name=mRNA_S-dermatodea_contig8588.16748.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6622bp|location=Sequence derived from alignment at S-dermatodea_contig8588:2103..8724- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8588:2103..8724- >mRNA_S-dermatodea_contig8588.16748.1 ID=mRNA_S-dermatodea_contig8588.16748.1|Name=mRNA_S-dermatodea_contig8588.16748.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=6240bp|location=Sequence derived from alignment at S-dermatodea_contig8588:2103..8724- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |