mRNA_S-dermatodea_contig8584.16742.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8584.16742.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI) HSP 1 Score: 282 bits (722), Expect = 1.040e-84 Identity = 149/291 (51.20%), Postives = 183/291 (62.89%), Query Frame = 1
Query: 19 AQNVSSSDYPDCTGYAPYIQDGHCDEINNVADCGWDGGDCCPCTCLDD----LEHDCGVLTD-FDCVDPDVPDECGATPSPAAAFGFPDCTGYMYDLEDGNCDEDLNNEECGYDGGDCCRCTCTDDSGW----ECDRGSFDCKDPEAPDDCETASPTPSPAASYGYPDCTGTMYLHQNGYCSDDLNNEECGYDGGDYCCTCTCQSSSY-TCGTY-YNCLDPDAECVDSTSAQTTDDDTSVCSDPSRRGNGYCSYDLNTEACEYDGGDCCECTCSETSEIACGVNGYNCLDP 858
A + S +Y C GY +I+DG+CD N A+CGWDGGDCC CTC D L H CG L D +DC+DPDVPD+CG TPSPAAA G+PDC Y+Y+ +DG CD++LN ECGYDGGDCCRCTC D + W C +DC DP+AP C T SPTPSPAA +P+C G +Y+ +G C NNEEC +DGGD CC+CTC+ SSY +C +Y +C DP+A C TT T C S +GYC NTE C++DGGDCC CS T+ CLDP
Sbjct: 56 APSDGSPEYLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCLDPDVPDDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAECGYDGGDCCRCTCRDYNSWGYYTNCGYYGYDCMDPDAPSSCSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECDWDGGD-CCSCTCEGSSYYSCSSYSMDCQDPNANC-------TTPSPTPYCPWAS---DGYCDSYYNTEDCDWDGGDCCAYGCSSTT----------CLDP 325
BLAST of mRNA_S-dermatodea_contig8584.16742.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE) HSP 1 Score: 281 bits (719), Expect = 2.380e-84 Identity = 153/300 (51.00%), Postives = 188/300 (62.67%), Query Frame = 1
Query: 19 AQNVSSSDYPDCTGYAPYIQDGHCDEINNVADCGWDGGDCCPCTCLDD----LEHDCGVLTD-FDCVDPDVPDECGATPSPAAAFGFPDCTGYMYDLEDGNCDEDLNNEECGYDGGDCCRCTCTDDSGW---ECDRGSFDCKDPEAPDDCETASPTPSPAASYGYPDCTGTMYLHQNGYCSDDLNNEECGYDGGDYCCTCTCQSSSY-TCGTY-YNCLDPDAECVDSTSAQTTDDDTSVCSDPSRRGNGYCSYDLNTEACEYDGGDCCECTCSETSEIACGVNGYNCLDPD-ACSSTTSS 885
A + SS+Y C GY +I+DG+CD N A+CGWDGGDCC CTC D L H CG L D ++C+DPDVPD+CG TPSPAAA G+PDC Y+Y+ +DG CD++LN CGYDGGDCCRCTC D S W C +DC DP+AP C T SPTPSPAA +P+C G +Y+ +G C NNEECG+DGGD CC+CTC+ S Y +C +Y +C DP+A C TT T C S +GYC NTE C++DGGDCC CS T+ CLDP C S T+S
Sbjct: 56 APSDGSSEYLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGADSDEELAHPCGQLGDGYNCLDPDVPDDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYSSWGYSTCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGD-CCSCTCEGSYYYSCSSYSMDCQDPNANC-------TTPSPTPYCPFAS---DGYCDSYYNTEDCDWDGGDCCAYGCSSTT----------CLDPIYGCDSITTS 334
BLAST of mRNA_S-dermatodea_contig8584.16742.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE) HSP 1 Score: 207 bits (528), Expect = 4.120e-59 Identity = 134/330 (40.61%), Postives = 172/330 (52.12%), Query Frame = 1
Query: 43 YPDCTGYAPYIQDGHCDEINNVADCGWDGGDCCPCTCLDDLEHDCGVLTD-FDCVDPDVPDECGATPSP------------------------AAAFGFPDCTGYMYDLEDGNCDEDLNNEECGYDGGDCCRCTCTDDSGWECDRG----SFDCKDPEAPDDCETASPTPSPAASYGYPDCTGTM-YLHQNGYCSDDLNNEECGYDGGDYCCTCTCQ---SSSY--TCGTY-YNCLDPDAECVDSTSAQTTDD----DTSVCSDPSRR-GNGYCSYDLNTEACEYDGGDCCECTCSETSEIACGVNGYNCLDPDACSSTTSSGSKTLEAD 909
YPDC + D CD NVA+CG+DGGDCC CTC+D + CG + CVDPD P +C + PSP A+ +P C GY+ + DG CDED N CG+DGGDCC CTC D+ + + G +DC+DP+ P+DC A+ + C G Y Q+GYC DDLN ECGYDGGD CC CTC+ S Y +CG Y Y+CLDP+A ST + T D C G+G+C Y N E C++DGGDCC CTC + CG ++C DP ST S + TL++D
Sbjct: 61 YPDCEADTALVGDSICDLDFNVAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVDPDAPQDCASAPSPTPNTPSAPTSSDAIDVTAGPTSLDASDDPYPGCGGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGMDAEVDHECGLLNDGYDCRDPDVPEDCNLAN----------FAQCEGMNGYDWQDGYCDDDLNTAECGYDGGD-CCRCTCRDYDSWGYYSSCGYYGYDCLDPEAPSSCSTDSPTPSPAAGTDWPECEGYLFEIGDGHCDYYNNNEECDWDGGDCCACTCV-SGYYTCGYYTFDCEDPSV--STDCSTTSTLDSD 376
BLAST of mRNA_S-dermatodea_contig8584.16742.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 202 bits (515), Expect = 1.210e-56 Identity = 130/291 (44.67%), Postives = 158/291 (54.30%), Query Frame = 1
Query: 52 CTGYAPYIQDGHCDEINNVADCGWDGGDCCPCTCLDDLEHDCGVLTDFDCVDPDVPDECGATPSPAAAFGFPDCTGYMYDLEDGNCDEDLNNEECGYDGGDCCRCTCT---DDSGWECDRGS-------FDCKDPEAP---DDCETASPTPSPAASYGYPDCTGTMYLHQNGYCSDDLNNEECGYDGGDYCCTCTCQSSSYTCGTY-YNCLDPDAECVDSTSAQT--TDDDTSVCSDPSRRGNGYCSYDLNTEACEYDGGDCCECTCS----ETSEIACGVNGYNCLDPDA 864
C G ++ DG CD+INN +CG+DGGDCC CTCLDD ++CG+ F C+DP EC A +C + + DG CD D N EEC YDGGDCC CTC DDSG D GS F C DP+AP DD T + C G +G+C DD NN+ECGYD GD CC+CTC +Y CG ++C+DP AECVD T TDD C + NGYC +D N E C YDGGDCCECTC E +C +G++C DP A
Sbjct: 177 CGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDF-YECGIRG-FACIDPSA--EC-ADDDDVTVDTVENCG--VRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSG---DDGSLCSESTVFACIDPDAPCVNDDDITVDMMDT---------CGGHPINFGDGWCDDDNNNKECGYDSGD-CCSCTCVDGTYECGIVGFDCVDPSAECVDDDYPSTGVTDD----CGNAGTVANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGSDSC-TSGFDCQDPTA 442
BLAST of mRNA_S-dermatodea_contig8584.16742.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI) HSP 1 Score: 180 bits (457), Expect = 3.040e-50 Identity = 129/322 (40.06%), Postives = 162/322 (50.31%), Query Frame = 1
Query: 4 WSGVSAQNVSSSDYPDCTGYAPYIQDGHCDEINNVADCGWDGGDCCPCTCLDDLEHDCGVLTDFDCVDPDVP--DECGATPSPAAAFGFPDCTGYMYD---LEDGNCDEDLNNEECGYDGGDCCRCTCTD------DSGWECDRG---SFDCKDPEAP---DDCETASPTPSPAASYGYPDCTGTMYLHQNGYCSDDLNNEECGYDGGDYCCTCTCQSSS----YTCGT-YYNCLDPDAECVDSTSAQTTDDDTSV-----CSDPSRRGNGYCSYDLNTEACEYDGGDCCECTC----SETSEIAC----GVNGYNCLDPDA 864
WS S+ ++SD D A I +G C+ NN+ +CG+DGGDCC CTC +D E+ CG + C+DPD D+ T D YD + +G CD LNNE+C YDGGDCC CTC DSG C G F C DP+AP DD TA D T + NGYC D N+ EC YDGGD CC CTC+S Y C + C+DP+AECVD DDD + C +R G+G C + N E C +DGGDCC+CTC S S+ AC +N ++CLD A
Sbjct: 75 WSSASSVVATTSDQFDACDAAQDIGNGRCNMGNNIEECGFDGGDCCECTC-EDGEYTCGQYYGYACIDPDATCVDDDAVTV---------DMMENCYDPSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEMM----------DLCSTGQIG-NGYCDDSNNSPECAYDGGD-CCECTCESHDDGYEYYCEPGSFACIDPEAECVD-------DDDNTAEQYEHCGWVTRIGDGMCDDENNKEECGFDGGDCCDCTCVVPSSAWSDYACQEVYNINSFDCLDTSA 367
BLAST of mRNA_S-dermatodea_contig8584.16742.1 vs. uniprot
Match: D7FX76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX76_ECTSI) HSP 1 Score: 174 bits (442), Expect = 3.480e-48 Identity = 106/250 (42.40%), Postives = 134/250 (53.60%), Query Frame = 1
Query: 43 YPDCTGYAPYIQDGHCDEINNVADCGWDGGDCCPCTCLDDLEHDCGVL-TDFDCVDPDVPDECGATPSP------------------------AAAFGFPDCTGYMYDLEDGNCDEDLNNEECGYDGGDCCRCTCTDDSGWECDRG----SFDCKDPEAPDDCETASPTPSPAASYGYPDCTGTM-YLHQNGYCSDDLNNEECGYDGGDYCCTCTCQ---SSSY--TCGTY-YNCLDPDAECVDSTSAQT 684
YPDC + D CD NVA+CG+DGGDCC CTC+D + CG T + CVDPD P +C ++PSP A+ +P C GY+ + DG CDED N CG+DGGDCC CTC D+ E + G +DC+DP+ PDDC A+ + C Y Q+GYC DDLN ECGYDGGD CC CTC+ S Y +CG Y Y+C+DP+A ST + T
Sbjct: 59 YPDCEADMALVGDSLCDFDVNVAECGFDGGDCCECTCVDTGDQVCGEGGTGYFCVDPDAPQDCASSPSPTPNTPSSPTSSDAIDVTAGPTSLDASDDPYPGCGGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGVDADVEHECGLLGDGYDCRDPDVPDDCNLAN----------FAQCEDMNGYDWQDGYCDDDLNTPECGYDGGD-CCRCTCRDYNSWGYYNSCGYYGYDCMDPEAPSSCSTDSPT 297
BLAST of mRNA_S-dermatodea_contig8584.16742.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 176 bits (447), Expect = 1.280e-47 Identity = 110/248 (44.35%), Postives = 133/248 (53.63%), Query Frame = 1
Query: 100 NNVADCGWDGGDCCPCTCLDDLEHDCGVLTDFDCVDPDVPDECGATPSPAAAFGFPDCTGYMYDLEDGNCDEDLNNEECGYDGGDCCRCTC--TDDSGWECDRGSFDCKDPEAP---DDCETASPTPSPAASYGYPDCTGTMYLHQNGYCSDDLNNEECGYDGGDYCCTCTCQS---SSYTCGTYYNCLDPDAECVDSTSAQTTDDDTSV-----CSDPSRRGNGYCSYDLNTEACEYDGGDCCECTC 804
NN A C +DGGDCC CTC D + CG + F C+DP+ P + D Y + DG CDED NNE C YDGGDCC CTC ++D W C +F C DP AP DD T + + S G D GYCS++LN EC YDGGD CC+CTC+S + C ++ C+DP+A CVD DDD +V C P GNG+C N EAC YDGGDCCECTC
Sbjct: 3 NNNAACAYDGGDCCECTCEDTPNNKCGRWSGFACIDPEAP----CVDDDSFTVDMIDNCDYPGGIGDGWCDEDNNNELCAYDGGDCCECTCEGSEDDDWHC--RNFACVDPNAPCVDDDSVTIDMIENCSWSTGIGD----------GYCSENLNTPECAYDGGD-CCSCTCESPYDDDWGC-MWFACIDPEAACVD-------DDDITVDMFENCEYPVDIGNGWCDEANNIEACGYDGGDCCECTC 225
BLAST of mRNA_S-dermatodea_contig8584.16742.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 169 bits (427), Expect = 6.230e-45 Identity = 131/328 (39.94%), Postives = 158/328 (48.17%), Query Frame = 1
Query: 7 SGVSAQNVSSSDYPDCTGYAPYIQDGHCDEINNVADCGWDGGDCCPCTCLDDLEHDCGVL-----TDFDCVDPDVP--DECGATPSPAAAFGFPDCTGYMYDLEDGNCDEDLNNEECGYDGGDCCRCTC---TDDSGWE------CDRGSFDCKDPEAP----DDCETASPTPSPAASYGYPDCTGTMYLHQNGYCSDDLNNEECGYDGGDYCCTCTCQSSSYTCG--TYYNCLDPDAECVDSTSAQTTDDDTSVCSDPSRRGNGYCSYDLNTEACEYDGGDCCECTCSET--SEIACGVNG--YNCLDPDA-CSSTTSSGSKTLEAD 909
S V+A ++SSS D DG+C NN A+CG+DGGDCC CTC + D + + F CVDPD P E G T + F +DL DG CD+ NNE CGYDGGDCC CTC TDD W+ C G F C DP AP DD A G +GYC D NN C YDGGD CC CTC+ ++ CG + + C+DP A CVD S T D C GNG+C + N E C YDGGDCCECTC + C +NC DP+A C ++GS D
Sbjct: 19 SSVAANSLSSSGCWDAL-----YGDGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDF-------WDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDD-WDNDLYVACGEG-FACIDPSAPCVNDDDITVDVDESCDAVGMG------------DGYCDMDNNNAACAYDGGD-CCECTCEPNN-KCGGRSGFACIDPGAPCVDDDSV--TVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPNASCFGEETTGSDDFSTD 316
BLAST of mRNA_S-dermatodea_contig8584.16742.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 164 bits (415), Expect = 6.440e-45 Identity = 115/274 (41.97%), Postives = 146/274 (53.28%), Query Frame = 1
Query: 118 GWDGGDCCPCTCLD--DLEHDCGVL-TDFDCVDPDVP--DECGATPSPAAAFGFPDCTGYMYDLEDGNCDEDLNNEECGYDGGDCCRCTCTD--DSGWECDRGSFDCKDPEAP--DDCETASPTPSPAASYGYPDCTGTMYLHQNGYCSDDLNNEECGYDGGDYCCTCTCQ-------SSSYT---CGTYYNCLDPDAECVDSTSAQTTDDDTSV-----CSDPSRRGNGYCSYDLNTEACEYDGGDCCECTCSETSEIACGV-NGYNCLDPDA 864
G+DGGDCC CTC+ D ++ C + F CVDP P D+ T A +C + + DG CD++ NNE CGYDGGDCC CTC + D + C S C DP AP DD + T + GY G NG+C ++ NNE CGYDGGD CC CTCQ + Y CG + C+DP+A CV+ DDD ++ C D GNG+C D N EAC YDGGDCCECTC + CG +G+ C+DP+A
Sbjct: 5 GFDGGDCCECTCVSVYDDDYSCSSTDSGFACVDPTAPCVDDDDITIEQAL-----NC--FPREFGDGWCDQENNNEICGYDGGDCCECTCVNAWDDDYSCAANSA-CIDPSAPCVDDDDV---TVDMVENCGYVGSVG------NGWCDEENNNEGCGYDGGD-CCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVN-------DDDITLDIVENC-DSVAVGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECGRWSGFACIDPEA 252
BLAST of mRNA_S-dermatodea_contig8584.16742.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 170 bits (430), Expect = 5.050e-44 Identity = 121/295 (41.02%), Postives = 148/295 (50.17%), Query Frame = 1
Query: 73 IQDGHCDEINNVADCGWDGGDCCPCTCLDDLEHDCGVLTD------------FDCVDPDVPDECGATPSPAAAFGFPDCTGYMYDLEDGNCDEDLNNEECGYDGGDCCRCTCTD---DSGWECDR---------GSFDCKDPEAP--DDCETASPTPSPAASYGYPDCTGTMYLHQNGYCSDDLNNEECGYDGGDYCCTCTCQSS-SYTCGTY--YNCLDPDAECVDSTSAQTTDDDTSVCSDPSRRGNGYCSYDLNTEACEYDGGDCCECTCS--ETSEIACGVNGYNCLDPDA 864
+ DG+CD+ NN CG+DGGDCC CTC+ +H D F C+DP P C A +C GY+ L DG C E+ NNE CGYDGGDCC CTC D W G F C DP A DD E + G + T+ + +GYC+ D NNE C YDGGD CC CTC+ + + CG + + C+DP A CVD S T D C P GNG+C D N E C YDGGDCCECTC E + AC N + C+DP+A
Sbjct: 59 LGDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAP--C-VEDDDITADMVENC-GYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEV---------TVGMVESCDTVSIG-DGYCNMDNNNEACAYDGGD-CCECTCEDTPNNRCGRWSSFACIDPAAPCVDDDSF--TVDMIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTCESLEDDDWAC-RNNFACVDPNA 335 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8584.16742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8584.16742.1 >prot_S-dermatodea_contig8584.16742.1 ID=prot_S-dermatodea_contig8584.16742.1|Name=mRNA_S-dermatodea_contig8584.16742.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=320bp FWSGVSAQNVSSSDYPDCTGYAPYIQDGHCDEINNVADCGWDGGDCCPCTback to top mRNA from alignment at S-dermatodea_contig8584:2433..4544+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8584.16742.1 ID=mRNA_S-dermatodea_contig8584.16742.1|Name=mRNA_S-dermatodea_contig8584.16742.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2112bp|location=Sequence derived from alignment at S-dermatodea_contig8584:2433..4544+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8584:2433..4544+ >mRNA_S-dermatodea_contig8584.16742.1 ID=mRNA_S-dermatodea_contig8584.16742.1|Name=mRNA_S-dermatodea_contig8584.16742.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at S-dermatodea_contig8584:2433..4544+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |