mRNA_S-dermatodea_contig8578.16736.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8578.16736.1
Unique NamemRNA_S-dermatodea_contig8578.16736.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8578.16736.1 vs. uniprot
Match: D7FJQ6_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ6_ECTSI)

HSP 1 Score: 445 bits (1145), Expect = 5.000e-146
Identity = 237/389 (60.93%), Postives = 290/389 (74.55%), Query Frame = 1
Query:  205 AQNQLLMSGGGIPLTLRKHRNFRRFVFAVPEDGAPIPPWRSKRSALPALTLGYLDLFSDLFTALSYY-SERTWWCVLGLVFIAVPALVAGVFVFRKEGPLRRLAVVAQLGLVVESYVSCSEEGYSSVLVTLRVLEPLFQSLPQLMLQSYVLLVNREYLPLRIFSVAMSTLSVAFATTGIIAEHPLSQLKWARGVDYPSPRCWRASTLFFGTVPYVGSVILRGGFRMHPQDFVWVFLLYEVLEIISRIFSLAVVALVGGYYFFIALAWFWASRWYISRHSIVGSAEHEALRFRALARMVGMPFMDSVVDRVGAYTLSCTLTVMETVCCLTVGNAVSTDAETDRLSDVSRRLFTAVAIVFLGGKIALAIAVVEPFKAKIGRVTPAVKGELR 1368
            AQN LLMSGGGIPL+LR HRNFRRFVFAVPE GAPIPPWRSKRS +PAL LGYLDLF+DL T LSY+ S  T W  +G+ FI  PAL AG +V R++   R +A   QLGL+VE  +S  EE YS  LV LRVLEPLFQSLP L+LQ++VLLV+ E L LR+ SV +STLS+A A+TGI+AEHPLSQL+W+RGV YP+ +   AS++FFGTVP+ GSV +R GF++HPQDFVW FLLY+++EIISR+ SL V+A+  GYYFF  LAW W SR +I+  SI  S   E LRFR L R    P MDSV+DRV AY +SC  T +ET C L VGNA+    ET R SD++RR+F+ ++++ +GGKIAL  A+V PFKAKI    P  KGELR
Sbjct:  255 AQNALLMSGGGIPLSLRNHRNFRRFVFAVPEHGAPIPPWRSKRSLIPALVLGYLDLFTDLATVLSYWRSGLTLWFAIGVAFITGPALCAGAYVLREKTVGRGIAAATQLGLIVEGLISVKEESYSHALVALRVLEPLFQSLPMLLLQTHVLLVSEECLALRVVSVMVSTLSLAVASTGIVAEHPLSQLRWSRGVKYPTAKLPLASSMFFGTVPFAGSVCVRMGFQLHPQDFVWWFLLYQLMEIISRVLSLGVIAMPLGYYFFCLLAWLWLSRTFIACVSIGDSVVREKLRFRKLIRFAAAPIMDSVIDRVKAYKVSCFFTCVETACFLAVGNALPHADET-RASDLTRRVFSVISLLAMGGKIALGTALVVPFKAKISENLPPAKGELR 642          
BLAST of mRNA_S-dermatodea_contig8578.16736.1 vs. uniprot
Match: A0A6H5JIQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ5_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 6.680e-77
Identity = 165/372 (44.35%), Postives = 226/372 (60.75%), Query Frame = 1
Query:  232 GGIPLTLRKHRNFR--RFVFAVPEDGAPIPPWRSKRSALPALTLGYLDLFSDLFTALSYY-SERTWWCVLGLVFIAVPALVAGVFVFRKEGPLRRLAVVAQLGLVVESYVSCSEEGYSSVLVTLRVLEPLFQSLPQLMLQSYVLLVNRE-----YLPLRIFSVAMSTLSVAFATTGIIAEHPLSQLKWARGVDYPSPRCWRASTLFFGTVPYVGSVILRGGFRMHPQDFVWVFLLYEVLEIISRIFSLAVVALVGGYYFFIALAWFWASRWYISRHSIVGSAEHEALRFRALARMVGMPFMDSVVDRVGAYTLSCTLTVMETVCCLTVGNAVSTDAETDRLSDVSRRLFTAVAIVFLGGKIALAIAVVEPFK 1323
            G +P +L  H N +   F F V EDGAP+P ++S +S    L LGY D+ +D+   +SYY ++  WW  LG++FI  PAL A + + R+E  LRR+ V  QLG++  + VS     YS VL +LRV+EPL++S+PQLMLQ Y LL+  +     +L  R+ S+  S  S+A+ATTG++AE  LS+L  A   D  S  C   + L FG VP   SV +    R + Q FVW FL Y+VLEI ++  SL ++ALV   YFF+AL W W SR Y+ R  I G  EH +LR R+  R+VGMPFMDSV+D +  Y + C LT +E V CLT+GN   TD      +DV R ++T VA V + GK+ L   +V PFK
Sbjct:   29 GEVPKSLLDHPNRKGGAFQFHVTEDGAPVPGYKSWKSVGIQLVLGYADVGTDVDAVVSYYQADHMWWFALGMIFIIGPALFAAIVLLRREHWLRRVLVALQLGMLFGALVSWGTSSYSPVLASLRVMEPLYESVPQLMLQLYGLLLEWDNDGTMWLSRRLLSILFSCFSLAYATTGLVAEQALSRL--APTADAASASCPGLTGLVFGAVPANSSVAVYRS-RWNSQKFVWAFLFYQVLEIGAKFISLGLLALVWRAYFFLALFWLWGSRAYVLRRLIAG--EH-SLRVRSQFRLVGMPFMDSVMDVLQTYDVGCALTTVEFVFCLTIGNMFYTDEGGQLPTDVGR-VWTYVAAVCMVGKLCLGYLIVRPFK 393          
BLAST of mRNA_S-dermatodea_contig8578.16736.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 3.500e-51
Identity = 136/378 (35.98%), Postives = 203/378 (53.70%), Query Frame = 1
Query:  232 GGIPLTLRKHRNFRRFVFAVPEDGAPIPPWRSKRSALPALT----LGYLDLFSDLFTALSYYSERTW-WCVLGLVFIAVPALVAGVFVFRKEGPLRRLAVVAQLGLVVESYVSCSEEGYSSVLVTLRVLEPLFQSLPQLMLQSYVLL-------VNREYLPLRIFSVAMSTLSVAFATTGIIAEHPLSQLKWAR-GVDYPSPRCWRAST-LFFGTVPYVGSVILRGGFRMHPQDFVWVFLLYEVLEIISRIFSLAVVALVGGYYFFIALAWFWASRWYISRHSIVGSAEHEALRFRALARMVGMPFMDSVVDRVGAYTLSCTLTVMETVCCLTVGNAVSTDAETDRLSDVSRRLFTAVAIVFLGGKIALAIAVVEPFK 1323
            G IPL ++K   F +F+  +  +G P+P  R    A   L     LGY DL SDL+TA+SYY  R + W  LGLVF   PA++  +F     G  RR  V AQL L+ E+ ++ ++  YS VL  +RV+EPLF+S+PQL+LQ + +L            L  R+ SV +S  S+A+A T + +   LS     + G  +    C+ + T L F  VP  G+  LRG   +HP+  VW+ L+Y VLEI++R   LA++ LV   +FF  L + W     +SR  +V  A  E L FR   R+V MPF+DS++D   A+ +   LT++E + C+ V +      + D L   +R +   VA   + GK+ LA+  + P K
Sbjct:  374 GPIPLEVQKLPRFGKFITGIALNGPPLPAVRGPLHAFKVLIVPVLLGYADLASDLYTAVSYYEARHFVWFGLGLVFALGPAVIMSLFCLSGIGWFRRFLVAAQLSLLAEALITLTKADYSPVLALVRVIEPLFESVPQLLLQLHAMLWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGKDGERFRLCPCFPSLTGLVFSRVPAQGTSSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLLLVVRGWFFFVLVYLW-----VSRALMVWMAAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLGLTLVEFIVCMVVYHVY----KHDDLPSRARLVLVTVASCCMVGKMCLALVAISPLK 742          
BLAST of mRNA_S-dermatodea_contig8578.16736.1 vs. uniprot
Match: D8LFI4_ECTSI (Leucine Rich Repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI4_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 8.240e-48
Identity = 138/386 (35.75%), Postives = 203/386 (52.59%), Query Frame = 1
Query:  229 GGGIPLTLRKHRNFRRFVFAVPEDGAPIPPWRSKRSALPAL----TLGYLDLFSDLFTALSYY-SERTWWCVLGLVFIAVPALVAGVFVFRKEGPLRRLAVVAQLGLVVESYVSCSEEGYSSVLVTLRVLEPLFQSLPQLMLQSYVLLV-------NREYLPLRIFSVAMSTLSVAFATTGIIAEHPL--SQLKWARGVDY--PSPRCWRASTLFFGTVPYVGSVILRGGFR-MHPQDFVWVFLLYEVLEIISRIFSLAVVALVGGYYFFIALAWFWASRWYISRHSIVGSAEHEA---LRFRALARMVGMPFMDSVVDRVGAYTLSCTLTVMETVCCLTVGNAVSTDAETDRLSDVSRRLFTAVAIVFLGGKIALAIAVVEPFKA 1326
            GG IP  L +H  F++F+     DG P+P       A+  L     LGYLDL SDL+TA+SYY S   +W VL + F   PA++   F   +    RR  V  QL L++E+  S +   YS VL  +RV+EPLF+S+PQL+LQ Y +L+       +   L  R+ SV +ST+S+A+A T + +   L  ++L    G +     P C   + L F  VP  G   L G    +HP+  VW   LY VLEI+SR   L ++ALV   +FF+ L + W     ISR  +V +A +     + FR   R+V MPF+DS++D   A+     LT++E V C+   +  S+D     L   +R   T ++I  + GK+ LA+  + P KA
Sbjct:  157 GGEIPKRLAEHPRFKKFIVGRAMDGPPLPHVNDAGHAVKILIVPVALGYLDLASDLYTAVSYYNSGHLFWFVLVVAFALGPAVIVSAFFLPEFTCGRRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERFRMCPDCPSVTALVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLW-----ISRCLVVWAAAYSGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVEFVACIVTYHLFSSD----HLPPHARWTLTIISICCMVGKMRLALLAIIPLKA 533          
BLAST of mRNA_S-dermatodea_contig8578.16736.1 vs. uniprot
Match: A0A6H5JJ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ93_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 3.150e-47
Identity = 132/385 (34.29%), Postives = 195/385 (50.65%), Query Frame = 1
Query:  211 NQLLMSGGGIPLTLRKHRNFRRFVFAVPEDGAPIPPWRSKRSALPALT----LGYLDLFSDLFTALSYYSERTW-WCVLGLVFIAVPALVAGVFVFRKEGPLRRLAVVAQLGLVVESYVSCSEEGYSSVLVTLRVLEPLFQSLPQLMLQSYVLL-------VNREYLPLRIFSVAMSTLSVAFATTGIIAEHPLSQLKWAR-GVDYPSPRCWRAST-LFFGTVPYVGSVILRGGFRMHPQDFVWVFLLYEVLEIISRIFSLAVVALVGGYYFFIALAWFWASRWYISRHSIVGSAEHEALRFRALARMVGMPFMDSVVDRVGAYTLSCTLTVMETVCCLTVGNAVSTDAETDRLSDVSRRLFTAVAIVFLGGKIALAIAVVEPFK 1323
            NQL    G IPL L+K  +F +F+  +  +G P+P  R    A   L     LGY DL SDL+TA+SYY  + + W  LGL F   PA++   F     G  RR  V  QL L+ E+ ++  +  YS VL  +RV+ PLF+S+PQL+LQ + +L            L  R+ SV +S  S+A+A T + +   LS       G  +    C+ + T + F  VP  G+  LRG   +HP+  VW+ L+Y VLEI +R   LA++  V   +FF  L + W     + R  IV     E L FR   R+V MPF+DS++D   A+ +   LT++E + C+ + +    D    R    +R +   VA   + GK+ LA   + P K
Sbjct:   23 NQL---SGPIPLELQKLPHFGKFITGIALNGPPLPAVRDPLHAFKILIVPVILGYADLASDLYTAVSYYEAKHFVWFGLGLFFALGPAVIMSAFCLSGVGWFRRFLVATQLSLLAEALITLQKADYSPVLALVRVIGPLFESVPQLLLQLHAMLWLWTETSFASSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGMDGERFRLCPCFPSLTGVVFSRVPAEGTSSLRGVGDVHPRSHVWLCLVYHVLEIFARFVPLAMLVQVVRGWFFFVLVYLW-----VGRGLIVWMTAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLVLTLVEFIVCMVIYHVYMNDDLPSR----ARLVLVTVASCCMVGKMCLAWVAISPLK 395          
BLAST of mRNA_S-dermatodea_contig8578.16736.1 vs. uniprot
Match: A0A6H5K7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q2_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 1.550e-36
Identity = 127/385 (32.99%), Postives = 188/385 (48.83%), Query Frame = 1
Query:  229 GGGIPLTLRKHRNFRRFVFAVPEDGAPIPPWRSKRSALPAL----TLGYLDLFSDLFTALSYYSERTWWCVLGLVFIAVPALVAGVFVFRKEGPLRRLAVVAQLGLVVESYVSCSEEGYSSVLVTLRVLEPLFQSLPQLMLQSYVLLV-------NREYLPLRIFSVAMSTLSVAFATTGIIAEHPL--SQLKWARGVDYPS--PRCWRASTLFFGTVPYVGSVILRGGFR-MHPQDFVWVFLLYEVLEIISRIFSLAVVALVGGYYFFIALAWFWASRWYISRHSIVGSAEH---EALRFRALARMVGMPFMDSVVDRVGAYTLSCTLTVMETVCCLTVGNAVSTDAETDRLSDVSRRLFTAVAIVFLGGKIALAIAVVEPFKA 1326
            GG IP  L +H  F++F+     DG P+P       A+  L     LGYLDL SDL+T                     P  +   +     G  RR  V  QL L++E+  S +   YS VL  +RV+EPLF+S+PQL+LQ Y +L+       +   L  R+ SV +ST+S+A+A T + +   L  ++L    G +     P C   + L F  VP  G   L G    +HP+  VW   LY VLEI+SR   L ++ALV   +FF+ L + W     ISR  +V +A +     + FR   R+V MPF+DS++D   A+     LT+++ V C+   +  S+      L   +R   T +AI  + GK+ LA+  + P KA
Sbjct:   86 GGEIPKRLAEHPRFKKFIVGRAMDGPPLPHINDTGHAVKILIVPVALGYLDLTSDLYT---------------------PTTIQATYFEFTCG--RRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERSRMCPDCPFITGLVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLW-----ISRCLVVWAAAYWGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVKFVACIVTYHLFSSG----HLPPHARWTLTIIAICCMVGKMRLALLAILPLKA 438          
BLAST of mRNA_S-dermatodea_contig8578.16736.1 vs. uniprot
Match: A0A6H5KD04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD04_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.340e-35
Identity = 125/393 (31.81%), Postives = 206/393 (52.42%), Query Frame = 1
Query:  232 GGIPLTLRKHRNFRRFVFAVPEDGAPIPPWRSKRSALPALTL------GYLDLFSDLFTALSYY-SERTWWCVLGLVFIAVPALVAGVF-----VFRKEGP-LRRLAVVAQLGLVVESYVSCSEEGYSSVLVTLRVLEPLFQSLPQLMLQSYVLLV---NREYLPLRIFSVAMSTLSVAFATTGIIAEHPLSQLK--WARGVDYPSPRCWRASTLFFGTVPYVGSVILRGGFRMHPQDFVWVFLLYEVLEIISRIFSLAVVALVGGYYFFIALAWFWASRWYISRHSIVGSAE----------HEALRFRALARMVGMPFMDSVVDRVGAYTLSCTLTVMETVCCLTVGNAVSTDAETDRLSDVSRRLFTAVAIVFLGGKIALAIAVVEPFKA 1326
            G IP  +   R F +F   V +         ++ S LP  T+      GYLDL SDL+TA+SYY S  ++W  L L F   P ++A VF     + R   P +RR+ V  QL L+VE++ + ++  ++ +L  +R++E LF+S+PQL+LQ Y  L+   + E   LR+ SV +S  S+A+  T + +   L +       G+    P C   + L F  VP  GS  L G   +HP+  VW+ LLY +LEI+SR   LA++ALV   +FF+ L + W SR+ + + +   + +           +++  R   ++V MPF+DSV+D   A+ L   +T++E + C+ + +  + D   D  +++   L+  VA   + GK+ LA   + P +A
Sbjct:   34 GPIPTEVVNLRYFDKFNTGVLD---------AESSRLPTGTVMLQVFFGYLDLVSDLYTAVSYYESGDSFWFTLVLAFALGPGIIASVFFLTPTIVRVRVPWVRRVLVATQLSLLVEAWRNVAKRRFTPILEVVRLIEALFESVPQLLLQLYAALLLWSSPERNVLRLGSVCISAGSLAYNATDLFSAKRLERCSDPLEGGI---CPCCSWLTGLPFSRVPEKGSSRLNGWGDVHPRTHVWLCLLYHILEIVSRFVPLAMLALVMRKWFFLVLPYLWWSRYAVRKKAAAWTRKSTRETDKARPRKSVTERVRVKLVAMPFLDSVMDGSAAFGLGLVVTLVEFIVCVVIYHLYNHD---DLPTNLRLGLYV-VASSCMVGKLLLAALAIFPLRA 410          
BLAST of mRNA_S-dermatodea_contig8578.16736.1 vs. uniprot
Match: A0A6H5JL60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL60_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 2.490e-33
Identity = 103/307 (33.55%), Postives = 155/307 (50.49%), Query Frame = 1
Query:  436 LVFIAVPALVAGVFVFRKEGPLRRLAVVAQLGLVVESYVSCSEEGYSSVLVTLRVLEPLFQSLPQLMLQSYVLL-------VNREYLPLRIFSVAMSTLSVAFATTGIIAEHPLSQLKWARGVDYP----SPRCWRASTLFFGTVPYVGSVILRGGFRMHPQDFVWVFLLYEVLEIISRIFSLAVVALVGGYYFFIALAWFWASRWYISRHSIVGSAEHEALRFRALARMVGMPFMDSVVDRVGAYTLSCTLTVMETVCCLTVGNAVSTDAETDRLSDVSRRLFTAVAIVFLGGKIALAIAVVEPFK 1323
            L F   PA++  +FV    GP RR  V  QL L+ E++ +   + YS VL  +RV+EPLF+S+PQL+LQ Y +L        +   L  R  SV +S  S+A+A T + +   L  L    G D       P C   + L F  VP  G+  L+G   +HP+  VW+  +Y VLEI++R   LA++ LV   +F + L + W SR  + R         E L FR   R+V MPF+DS++D   A+     LT++E + C+ + +      + D L   +R +   VA   + GK+ LA   + P K
Sbjct:   13 LFFALGPAVIVALFVLSGVGPFRRFLVATQLSLLAEAWNTVGGQVYSPVLALVRVVEPLFESVPQLLLQLYAMLRLWPETSSSSSRLAWREVSVCISVASLAYAATDVSSVERL--LTCGGGSDCERFRLGPCCSSLTGLVFSRVPAQGTSSLKGVGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVRGWFLLVLVYLWVSRVLMVR------VTREGLDFRFGVRLVAMPFLDSIMDETTAFGTGLVLTLVEFILCVVIYHVY----KHDDLPSGARLVLVTVASCCMVGKMCLAWVTISPLK 307          
BLAST of mRNA_S-dermatodea_contig8578.16736.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 3.740e-17
Identity = 94/328 (28.66%), Postives = 140/328 (42.68%), Query Frame = 1
Query:  298 DGAPIPPWR----SKRSALPALTLGYLDLFSDLFTALSYY-SERTWWCVLGLVFIAVPALVAGVFVFRKEGPLRRLAVVAQLGLVVESYVSCSEEGYSSVLVTLRVLEPLFQSLPQLMLQSYVLLVNREYLPLRIFSVAMSTLSVAFATTGIIAEHPLSQLKWARGVDYPSPRCWRASTLFFGTVPYVGSVILR-GGFRMHPQDFVWVFLLYEVLEIISRIFSLAVVALVGGYYFFIALAWFWASRWYISRHSIVGSAEHEALRFRALARMVGMPFMDSVVDRVGAYTLSCTLTVMETVCCLTVGNAVSTDAETDRLSDVSRRLFTAV 1263
            DG P+P       +K+  +  ++LGY DL SD+FTA+ Y+  +   W  LGL F   PAL+  +F        RR+ V   L L+ E++ +  +E YS VL  +RV+EPLF+S+PQL+LQ Y +L+                       T  +  H     +                         VGSV +          D   V  L      +S   SLA+   V   +  + L + W SR  I    +   A   +L FR   R+V MPF DS+VD    +  +   T++E + CL + +A + D     LS  +RR  T V
Sbjct:   46 DGPPLPQVEDDDHAKKILVLPVSLGYPDLVSDIFTAVFYFRGDHPVWGGLGLAFALGPALITSIFFLSGFQWYRRVLVATHLSLIYEAWTTVGDEQYSPVLALVRVVEPLFESVPQLLLQLYAMLI---------------------LWTETMLSHGRLVWRXXXXXXXXXXXXXXXXXXXXXXXXXVGSVCISVASLAYAATDVSSVEFLATQTGEVSYFVSLAMFFTVIRKWSSLVLLYLWMSRGVI----VXIWASKTSLDFRFRVRLVAMPFTDSIVDGAVVFRGALVWTLLEFMLCLALYHAYAQDD----LSASARRALTIV 344          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8578.16736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FJQ6_ECTSI5.000e-14660.93Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A6H5JIQ5_9PHAE6.680e-7744.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBY3_ECTSI3.500e-5135.98Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LFI4_ECTSI8.240e-4835.75Leucine Rich Repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5JJ93_9PHAE3.150e-4734.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Q2_9PHAE1.550e-3632.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD04_9PHAE2.340e-3531.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL60_9PHAE2.490e-3333.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6W6_9PHAE3.740e-1728.66HTH psq-type domain-containing protein n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8578contigS-dermatodea_contig8578:4320..8686 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score444.9
Seed ortholog evalue4.6e-122
Seed eggNOG ortholog2880.D7FJQ6
EggNOG free text desc.regulation of response to stimulus
EggNOG OGs2R960@2759,COG4886@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-06_010590.1
Exons4
Model size1368
Cds size1368
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8578.16736.1prot_S-dermatodea_contig8578.16736.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8578 4320..8686 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925352.655145-CDS-S-dermatodea_contig8578:4319..54581622925352.655145-CDS-S-dermatodea_contig8578:4319..5458Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8578 4320..5458 -
1694079875.652778-CDS-S-dermatodea_contig8578:4319..54581694079875.652778-CDS-S-dermatodea_contig8578:4319..5458Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8578 4320..5458 -
1622925352.6727362-CDS-S-dermatodea_contig8578:6154..62321622925352.6727362-CDS-S-dermatodea_contig8578:6154..6232Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8578 6155..6232 -
1694079875.6644802-CDS-S-dermatodea_contig8578:6154..62321694079875.6644802-CDS-S-dermatodea_contig8578:6154..6232Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8578 6155..6232 -
1622925352.6854568-CDS-S-dermatodea_contig8578:7967..80391622925352.6854568-CDS-S-dermatodea_contig8578:7967..8039Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8578 7968..8039 -
1694079875.6744854-CDS-S-dermatodea_contig8578:7967..80391694079875.6744854-CDS-S-dermatodea_contig8578:7967..8039Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8578 7968..8039 -
1622925352.6944387-CDS-S-dermatodea_contig8578:8607..86861622925352.6944387-CDS-S-dermatodea_contig8578:8607..8686Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8578 8608..8686 -
1694079875.6839104-CDS-S-dermatodea_contig8578:8607..86861694079875.6839104-CDS-S-dermatodea_contig8578:8607..8686Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8578 8608..8686 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8578.16736.1

>prot_S-dermatodea_contig8578.16736.1 ID=prot_S-dermatodea_contig8578.16736.1|Name=mRNA_S-dermatodea_contig8578.16736.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=456bp
LAGPIPVELAQLKTMVELNLANNRLSGSIPAELGQIKNLMKLYLWGNNLT
GQIPEELGQLYLLEKLNLAQNQLLMSGGGIPLTLRKHRNFRRFVFAVPED
GAPIPPWRSKRSALPALTLGYLDLFSDLFTALSYYSERTWWCVLGLVFIA
VPALVAGVFVFRKEGPLRRLAVVAQLGLVVESYVSCSEEGYSSVLVTLRV
LEPLFQSLPQLMLQSYVLLVNREYLPLRIFSVAMSTLSVAFATTGIIAEH
PLSQLKWARGVDYPSPRCWRASTLFFGTVPYVGSVILRGGFRMHPQDFVW
VFLLYEVLEIISRIFSLAVVALVGGYYFFIALAWFWASRWYISRHSIVGS
AEHEALRFRALARMVGMPFMDSVVDRVGAYTLSCTLTVMETVCCLTVGNA
VSTDAETDRLSDVSRRLFTAVAIVFLGGKIALAIAVVEPFKAKIGRVTPA
VKGELR
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mRNA from alignment at S-dermatodea_contig8578:4320..8686-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8578.16736.1 ID=mRNA_S-dermatodea_contig8578.16736.1|Name=mRNA_S-dermatodea_contig8578.16736.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4367bp|location=Sequence derived from alignment at S-dermatodea_contig8578:4320..8686- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTTGCAGGCCCGATCCCGGTTGAGCTTGCGCAGCTGAAGACGATGGTAGA GCTGAACCTCGCGAACAACAGGCTGAGCGGTGAGCTTTTCCGGGAAATAC GCTCACGACAGAGCCACTCGGTCAGCGCTGACTTGAGTGGGGGGGGATCG AGTGTCTTCGTAAATCAACTTTCTGTGGCACACAGAGCGTTTCTTTTCAT ACCATTCCATAAATATATGACAATAAATGTAGACGATTCGGCTGGCCTCG AATCAGGGACTCGACTTTTTGTCGGATAAGACGTTCGCCACTGAGCCGCT CACTCAGCGCCGATCGAAGTGACTCAGTGGCTGGGTACCTTATCTGACGG CGGAGTCGACACAGCTGCGTATTGGGGGCGATGCCGTAGAGACTATGCGT ATTGCCCGCCGCGGTATTACCGGCACTTCATTGAGCTCTTTTCGCGCGCT CGTATAGTGCATCTACGACCGCTTTACACACGTGTAGTCTTGTAAATGTG CATTTATTGCATGTTTAAGTTAGGGTGTTGATTTCTGCGTGTTTTTAAGG GCAGCGGTGGGCAGAGCAGGATGGTCGCGGCTCGTAAGTAGCTGGCTACC GACGCTCAAAAGGTTTTCGCGATATGATTGTTCACCTGTTTTTGCAGGCT CGATCCCCGCGGAGCTCGGGCAGATCAAGAACCTGATGAAGCTCTACCTC TGGGGAAACAATCTCACCGGTGAGCTAAACAATCACATGAAGTAATTCAT TTTGCCTATTGCGCCACTTCGGCGTTTTGCGTTTTATCATTTCGCTGCAA GGATCAGAATCAGAATCAGAATCAGGGCTAGCATGCTGCACGCAGAGCCC CTCTGCTGATGCCATTGCCCAGAAAGAACGCACGGAGGGTGCTCCGGGTC TGTTCTTGCTCCCGATCACCCTTGTTTCGCCTGCGGAAGTTGGGTAATTC ACATTATGATTCCGATTGCGTTGCCTTGTCGCCACATTTCAGCGAATATT CACAGTTGGTGCCCGCGCTCCTCGCCATAAATCGCTTGGGTATGATACAA GTTGTTCTTCTACAGCATCGTCATATTTCTGCCTGCAACAATTGTAAGGC TCTATCGCGTATTCGCCAAAGTTTCGAATGTGCAAGATCGTCGAAGTTGG GTAATACTCCCTACACACGATATGAATTCGATCGCGTCTATGTCATACAT AATTTGCGCTTGCGAGCGCAGCTAGATTCGTGGAGAAGCTGTTTTTGCGC GACAACCGTAACCAATTCAACTGTCGATTTTCGCGGTTCGGTCGCCGCGC TATATATTACGGGGGACTATACTAAACCATAGTTACCAGGTCCAAATTTG CCACAAGTCCCAACCTAGAAAAATATAAAAATAGGCTGGAATTAACAAGA TTTCAAGGTCGACGTTCTTGTGTTTTGCCATATCGTGTTCGATCCTGATG GATCGGATAACGCAGTATTTCGAACTCCTGCGATATTGGTATTAATGGTA CGTTAAACTTTTTTTTCATGAGATTTGTGTTCTTTGGGTGTTCATGGTCG CAATAGGTGGGTATTGTATTAGTATTCATGGTCATGAGATTTGGTCCTGA TTACTTGATTATAGTGTACCCCCGTTGTAGTAGGTTTCTACCTGGTAGGC TCTTCGAGGCGGTGGCTACGCCTCGGTCGGTGGATACCTGGCATCGGAGC CTTCGCAACGAGCTGGTGTTACGCGGCAAGGCGCACTATTACACTATTGT ATTAGACCTGGTTGGCTTGGGGATACCGTCGTCCAGACCCACCTTCATGC GGAAAAACCCCGAACCTTGGGCGACGCGTCGAGCTATGTAATGCTGCTCA CAGCACTGTTTTCACGATAGCGGTAGTCTCGCGCGAGAGGGAAACGCAGG ATCACGACCATGACCGTGAAACGCCGTTTGCATATGCCGTTTGCCGGCGT TTCATGCGCTCAAGAAGCGCGTGTTTATTTTACCTCGCACCCCGTGCGAA GCTTTTAATAGGCCGGGCTACTGCCGACCGTCCGTATGAGCTCTGCCGGC TGTGCTCCGACGAAAGCACGGCCAGATTTCACGCAGGTCCGCTTATGGCG TTCGAGTTGCGAATGCTGTCGGGAGATGTCGTACTTTGTAGCTGCGGGCT CTGATGAAAATCGGCGAGCTGAGGGACTCCGCTGACCCCCGGCGCCCGAT AAAAATTGAAGGAAGGCGAGCACTTGGGAGTGATGGGATGATTCCTCTGC TACCGCTGACTGCACCGACGGCTGGGGGTTGTGGAATGCGATGCCGACAA AAACGAAAAACGAACTCCCAAGCAAACGGTGCAACGGCTTAAATCAGACT CAGGCGTTCCGTAACTTTCCTAGGCAGGAATTCCTATGTAGTGATTTTCT CCTTACTTTATTATTTCGGACACAATGGCGCGCGCTCAACTCCCGGCCCA TCAGGTCAAATACCGGAGGAGCTCGGGCAGCTGTACCTTCTCGAGAAGCT GAACCTCGCGCAGAACCAGCTCCTCATGAGCGGTGAGGACTTGGCGGTGC TCCGGTGTACGTCGTGGTGGCAAGCTATCGTTGCCGTATCTTGGACGCGA AACGCGGTGGTTGGAGCGTGAAGTGGCATCTGCGTTGGGAAGAGTGTGAC CTTGCCGCGATACTGTGGGTTCTTGAACGAAGTACCCGTGAAGGAGCTTC GAGGAGTCTGGATGCACCCAATGTTATTTTTCGCCCCGAGATTGCCTGTG CAGCCTCCGTCCGGGCTACTGTAGTATACATGTTAATATTACCATGGGAG CATTAAGGCGTACATTGTAGACCGCTACTGAGATGCCACCCGTTAGGAAC AGTTGAAACCTTTTGCCATGGTCAACCTTTTCCTCGTCTTCTATGTGCAA GTTTTGCGTGCTTGAAAGGGTGACCGTGGGGTGGAGGCGTTTGTTCGCTG TGGGTTCTTTCACCCCTGACATGCAGAAGTGTTTTCGTGTGCACGTGGCC CTGCGTAGAGAGGCAAAGAAAGCGCCAAATCTGCTCCACTCACTCACCGC AAAAAAAAAAAAGACCTCTAGCTCAGCTCGTATCTTCCCCATCAGTTCTC TTTTGGAAAAAATAATTTTACAGCTTCTGCGCGTCGGGAAAAAAAACGCG AAAAAAACGGGTCAAAACATGGCTTTTCCTGAAACAACGTCGCCGGTCTA CCTATGATGCTTTTTTTGTTTTCACCAGGTGGAGGGATTCCGCTGACGCT CCGGAAGCACCGCAACTTCCGTCGCTTCGTTTTCGCGGTGCCCGAAGACG GCGCCCCGATTCCCCCCTGGAGATCCAAACGCTCAGCTCTCCCGGCCCTC ACCTTAGGGTACCTGGATCTATTCTCGGACCTTTTCACAGCCCTTTCCTA CTACTCCGAGCGGACGTGGTGGTGCGTCCTGGGTCTGGTGTTCATCGCGG TGCCTGCGTTGGTGGCCGGGGTGTTCGTCTTCCGGAAGGAGGGGCCGCTG AGGCGCCTCGCGGTCGTGGCGCAGCTTGGCCTGGTCGTCGAGTCGTACGT CTCGTGTTCGGAGGAGGGATACTCGAGCGTGCTGGTGACCCTGCGGGTGC TGGAGCCTCTCTTCCAATCGCTGCCGCAGCTCATGCTCCAGAGCTACGTG CTGCTGGTGAACCGGGAGTACCTGCCGCTGAGGATCTTCTCCGTGGCGAT GTCGACGCTCTCGGTGGCGTTCGCCACCACCGGGATAATCGCCGAGCACC CGCTCTCCCAGCTCAAGTGGGCGAGAGGTGTGGACTACCCTTCCCCGAGG TGCTGGCGCGCCTCGACCTTGTTCTTCGGCACCGTCCCGTACGTGGGGAG CGTCATCCTCCGGGGGGGGTTCCGGATGCACCCGCAAGACTTCGTGTGGG TCTTCTTGCTGTACGAGGTGCTTGAGATCATTAGCAGGATCTTCTCCCTC GCCGTGGTGGCCCTCGTGGGGGGTTACTACTTCTTCATCGCCCTGGCGTG GTTCTGGGCGAGCCGGTGGTACATCTCTCGCCACTCCATCGTCGGCTCGG CGGAACACGAGGCCCTGCGGTTCCGAGCGCTCGCGCGCATGGTGGGCATG CCCTTCATGGACTCCGTCGTGGACAGGGTCGGCGCATACACGCTCTCGTG CACGCTCACCGTGATGGAGACGGTGTGCTGCCTGACCGTCGGGAACGCGG TGTCCACCGACGCGGAGACCGACCGACTCTCCGACGTCTCCCGTCGGCTT TTCACCGCCGTCGCGATCGTGTTCCTCGGAGGCAAGATTGCCTTGGCCAT CGCCGTCGTGGAGCCGTTCAAGGCAAAAATCGGGCGCGTCACTCCCGCCG TGAAGGGAGAGCTGAGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8578:4320..8686-

>mRNA_S-dermatodea_contig8578.16736.1 ID=mRNA_S-dermatodea_contig8578.16736.1|Name=mRNA_S-dermatodea_contig8578.16736.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2736bp|location=Sequence derived from alignment at S-dermatodea_contig8578:4320..8686- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTTGCAGGCCCGATCCCGGTTGAGCTTGCGCAGCTGAAGACGATGGTAGA
GCTGAACCTCGCGAACAACAGGCTGAGCGCTTGCAGGCCCGATCCCGGTT
GAGCTTGCGCAGCTGAAGACGATGGTAGAGCTGAACCTCGCGAACAACAG
GCTGAGCGGCTCGATCCCCGCGGAGCTCGGGCAGATCAAGAACCTGATGA
AGCTCTACCTCTGGGGAAACAATCTCACCGGCTCGATCCCCGCGGAGCTC
GGGCAGATCAAGAACCTGATGAAGCTCTACCTCTGGGGAAACAATCTCAC
CGGTCAAATACCGGAGGAGCTCGGGCAGCTGTACCTTCTCGAGAAGCTGA
ACCTCGCGCAGAACCAGCTCCTCATGAGCGGTCAAATACCGGAGGAGCTC
GGGCAGCTGTACCTTCTCGAGAAGCTGAACCTCGCGCAGAACCAGCTCCT
CATGAGCGGTGGAGGGATTCCGCTGACGCTCCGGAAGCACCGCAACTTCC
GTCGCTTCGTTTTCGCGGTGCCCGAAGACGGCGCCCCGATTCCCCCCTGG
AGATCCAAACGCTCAGCTCTCCCGGCCCTCACCTTAGGGTACCTGGATCT
ATTCTCGGACCTTTTCACAGCCCTTTCCTACTACTCCGAGCGGACGTGGT
GGTGCGTCCTGGGTCTGGTGTTCATCGCGGTGCCTGCGTTGGTGGCCGGG
GTGTTCGTCTTCCGGAAGGAGGGGCCGCTGAGGCGCCTCGCGGTCGTGGC
GCAGCTTGGCCTGGTCGTCGAGTCGTACGTCTCGTGTTCGGAGGAGGGAT
ACTCGAGCGTGCTGGTGACCCTGCGGGTGCTGGAGCCTCTCTTCCAATCG
CTGCCGCAGCTCATGCTCCAGAGCTACGTGCTGCTGGTGAACCGGGAGTA
CCTGCCGCTGAGGATCTTCTCCGTGGCGATGTCGACGCTCTCGGTGGCGT
TCGCCACCACCGGGATAATCGCCGAGCACCCGCTCTCCCAGCTCAAGTGG
GCGAGAGGTGTGGACTACCCTTCCCCGAGGTGCTGGCGCGCCTCGACCTT
GTTCTTCGGCACCGTCCCGTACGTGGGGAGCGTCATCCTCCGGGGGGGGT
TCCGGATGCACCCGCAAGACTTCGTGTGGGTCTTCTTGCTGTACGAGGTG
CTTGAGATCATTAGCAGGATCTTCTCCCTCGCCGTGGTGGCCCTCGTGGG
GGGTTACTACTTCTTCATCGCCCTGGCGTGGTTCTGGGCGAGCCGGTGGT
ACATCTCTCGCCACTCCATCGTCGGCTCGGCGGAACACGAGGCCCTGCGG
TTCCGAGCGCTCGCGCGCATGGTGGGCATGCCCTTCATGGACTCCGTCGT
GGACAGGGTCGGCGCATACACGCTCTCGTGCACGCTCACCGTGATGGAGA
CGGTGTGCTGCCTGACCGTCGGGAACGCGGTGTCCACCGACGCGGAGACC
GACCGACTCTCCGACGTCTCCCGTCGGCTTTTCACCGCCGTCGCGATCGT
GTTCCTCGGAGGCAAGATTGCCTTGGCCATCGCCGTCGTGGAGCCGTTCA
AGGCAAAAATCGGGCGCGTCACTCCCGCCGTGAAGGGAGAGCTGAGGGTG
GAGGGATTCCGCTGACGCTCCGGAAGCACCGCAACTTCCGTCGCTTCGTT
TTCGCGGTGCCCGAAGACGGCGCCCCGATTCCCCCCTGGAGATCCAAACG
CTCAGCTCTCCCGGCCCTCACCTTAGGGTACCTGGATCTATTCTCGGACC
TTTTCACAGCCCTTTCCTACTACTCCGAGCGGACGTGGTGGTGCGTCCTG
GGTCTGGTGTTCATCGCGGTGCCTGCGTTGGTGGCCGGGGTGTTCGTCTT
CCGGAAGGAGGGGCCGCTGAGGCGCCTCGCGGTCGTGGCGCAGCTTGGCC
TGGTCGTCGAGTCGTACGTCTCGTGTTCGGAGGAGGGATACTCGAGCGTG
CTGGTGACCCTGCGGGTGCTGGAGCCTCTCTTCCAATCGCTGCCGCAGCT
CATGCTCCAGAGCTACGTGCTGCTGGTGAACCGGGAGTACCTGCCGCTGA
GGATCTTCTCCGTGGCGATGTCGACGCTCTCGGTGGCGTTCGCCACCACC
GGGATAATCGCCGAGCACCCGCTCTCCCAGCTCAAGTGGGCGAGAGGTGT
GGACTACCCTTCCCCGAGGTGCTGGCGCGCCTCGACCTTGTTCTTCGGCA
CCGTCCCGTACGTGGGGAGCGTCATCCTCCGGGGGGGGTTCCGGATGCAC
CCGCAAGACTTCGTGTGGGTCTTCTTGCTGTACGAGGTGCTTGAGATCAT
TAGCAGGATCTTCTCCCTCGCCGTGGTGGCCCTCGTGGGGGGTTACTACT
TCTTCATCGCCCTGGCGTGGTTCTGGGCGAGCCGGTGGTACATCTCTCGC
CACTCCATCGTCGGCTCGGCGGAACACGAGGCCCTGCGGTTCCGAGCGCT
CGCGCGCATGGTGGGCATGCCCTTCATGGACTCCGTCGTGGACAGGGTCG
GCGCATACACGCTCTCGTGCACGCTCACCGTGATGGAGACGGTGTGCTGC
CTGACCGTCGGGAACGCGGTGTCCACCGACGCGGAGACCGACCGACTCTC
CGACGTCTCCCGTCGGCTTTTCACCGCCGTCGCGATCGTGTTCCTCGGAG
GCAAGATTGCCTTGGCCATCGCCGTCGTGGAGCCGTTCAAGGCAAAAATC
GGGCGCGTCACTCCCGCCGTGAAGGGAGAGCTGAGG
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