prot_S-dermatodea_contig857.16729.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig857.16729.1
Unique Nameprot_S-dermatodea_contig857.16729.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length253
Homology
BLAST of mRNA_S-dermatodea_contig857.16729.1 vs. uniprot
Match: A0A6H5JKU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU5_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 2.580e-76
Identity = 145/268 (54.10%), Postives = 175/268 (65.30%), Query Frame = 0
Query:    4 TEIRRVAGAVAAVLSLSRSANCFVLQTSPSTFLRR------------SAAPLVASSSSQQLQQGRHDHGRGTHGERTLMMGELLPGNRGDGLEDGMDRRQAVSRAWRAALSLSTLGAAVAGT--ARPARAGVVE-------FLLPPQDGKTAIEVGEVDKEISFEDFERSLLKGEVKKCEFFGPNFDKAVLQLADGSKALISEGYPKERSFSDDSPMKVVGLLRNAGVPFTTQFKMTAYNKPKSYKSSETLEAESRQRTEDATMERLM 250
            T+ RR  G+ AAV+ LSR A+CFV   S   F  R            S A +  S   QQ Q        G H      + E    +   G    MDR+Q +S+ W+AALSLS LGAA   T  A PA AG +        FLLP Q+  T I VGE DKE+S EDFER+LLKGEV +CEFFGPNFDKA++ L DG++ALI EGYP+ER+FSDDSPMKVVGLLRNAGVPFTT+F+M  Y+KPKSYKSSETLEAE+RQ++EDAT++RLM
Sbjct:    2 TDCRRFLGSAAAVVMLSRGAHCFVAHGSLGCFSSRHVAASGPHHHWKSTASVCGSDGRQQSQ--------GAHAMTARGVDEAAAASSSGG---AMDRKQLLSKVWKAALSLSALGAAAVATGGAAPAEAGKLRIGQDIGGFLLPSQNQPTEIVVGESDKEVSLEDFERALLKGEVARCEFFGPNFDKAIIVLKDGTRALIGEGYPQERAFSDDSPMKVVGLLRNAGVPFTTEFRMAKYSKPKSYKSSETLEAENRQKSEDATLDRLM 258          
BLAST of mRNA_S-dermatodea_contig857.16729.1 vs. uniprot
Match: D7FGR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR8_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 1.260e-72
Identity = 119/170 (70.00%), Postives = 143/170 (84.12%), Query Frame = 0
Query:   87 MDRRQAVSRAWRAALSLSTLGAAVAGT--ARPARAGVVE----FLLPPQDGKTAIEVGEVDKEISFEDFERSLLKGEVKKCEFFGPNFDKAVLQLADGSKALISEGYPKERSFSDDSPMKVVGLLRNAGVPFTTQFKMTAYNKPKSYKSSETLEAESRQRTEDATMERLM 250
            MDR+Q +S+ W+AALSLS LGAA   T  A PA AG+ +    FLLPPQ+  T I VGE DKE+SFEDFER+LLKGEV +CEFFGPNFDKA++ L DG++ALI EGYP+ER+FSDDSPMKVVGLLRNAGVPFTT+F+M  Y+KPKSYKSSETLEAE+RQ++EDA ++RLM
Sbjct:   93 MDRKQLLSKVWKAALSLSALGAAAVATGGATPAEAGIGQDIGGFLLPPQNQPTEIVVGESDKEVSFEDFERALLKGEVARCEFFGPNFDKAIIVLKDGTRALIGEGYPEERAFSDDSPMKVVGLLRNAGVPFTTEFRMAKYSKPKSYKSSETLEAENRQKSEDAVLDRLM 262          
BLAST of mRNA_S-dermatodea_contig857.16729.1 vs. uniprot
Match: A0A835YGS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGS7_9STRA)

HSP 1 Score: 107 bits (268), Expect = 4.020e-26
Identity = 53/112 (47.32%), Postives = 75/112 (66.96%), Query Frame = 0
Query:  141 DKEISFEDFERSLLKGEVKKCEFFGPNFDKAVLQLADGSKALISEGYPKERSFSDDSPMKVVGLLRNAGVPFTTQFKMTAYNKPKSYKSSETLEAESRQRTEDATMERLMSE 252
            +K +S+ +F + L K E+   +F+G  +D+ VL L DG++A I EGYP+E   +D+SP+KVV  LRNAGVP+   F +  Y   KSYKS ETL AE RQR ED+ +E  M++
Sbjct:    6 EKLVSYAEFNQLLFKREIASAKFYGSKYDRCVLTLLDGTEARIGEGYPRESPATDESPLKVVAQLRNAGVPYKVDFNLRGYTYLKSYKSRETLAAEDRQRDEDSRIETRMAQ 117          
BLAST of mRNA_S-dermatodea_contig857.16729.1 vs. uniprot
Match: A0A7S0YV26_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YV26_9CRYP)

HSP 1 Score: 57.8 bits (138), Expect = 2.550e-7
Identity = 34/87 (39.08%), Postives = 50/87 (57.47%), Query Frame = 0
Query:  132 KTAIEVGE-VDKE-ISFEDFERSLLKGEVKKCEFFGPNFDKAVLQLADGSKALISEGYPKERSFSDDSPMKVVGLLRNAGVPFTTQF 216
            +T I+V +  D+E +SF++F   L  G V++ +F+G + DKA     DG K  I EG+P E      SP+ VV LL + GVP+   F
Sbjct:    3 QTTIDVSKPTDEESVSFKEFFDGLNAGRVERVDFYGYSGDKAYATFKDGKKIRIGEGFPVEIGNEASSPLFVVKLLGDKGVPYKFHF 89          
BLAST of mRNA_S-dermatodea_contig857.16729.1 vs. uniprot
Match: A0A7S2WW10_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW10_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.120e-5
Identity = 30/81 (37.04%), Postives = 42/81 (51.85%), Query Frame = 0
Query:  141 DKEISFEDFERSLLKGEVKKCEFFGPNFDKAVLQLADGSKALISEGYPKERSFSDDSPMKVVGLLRNAGVPFTTQFKMTAY 221
            +  I F  F   L   +V   EF  P+ D A   L D S+  I EG+P+E   +  SP+ V+ +L+N GVP+T  FK   Y
Sbjct:  122 ENSIPFSRFLELLEAKKVASVEFLPPSGDVAYATLEDNSRIRIGEGFPEELPGAWSSPLYVMRILQNKGVPYTFAFKKVPY 202          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig857.16729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JKU5_9PHAE2.580e-7654.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGR8_ECTSI1.260e-7270.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YGS7_9STRA4.020e-2647.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0YV26_9CRYP2.550e-739.08Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S2WW10_9STRA2.120e-537.04Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..252
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig857contigS-dermatodea_contig857:9791..16294 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig857.16729.1mRNA_S-dermatodea_contig857.16729.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig857 9619..16332 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig857.16729.1 ID=prot_S-dermatodea_contig857.16729.1|Name=mRNA_S-dermatodea_contig857.16729.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=253bp
MMGTEIRRVAGAVAAVLSLSRSANCFVLQTSPSTFLRRSAAPLVASSSSQ
QLQQGRHDHGRGTHGERTLMMGELLPGNRGDGLEDGMDRRQAVSRAWRAA
LSLSTLGAAVAGTARPARAGVVEFLLPPQDGKTAIEVGEVDKEISFEDFE
RSLLKGEVKKCEFFGPNFDKAVLQLADGSKALISEGYPKERSFSDDSPMK
VVGLLRNAGVPFTTQFKMTAYNKPKSYKSSETLEAESRQRTEDATMERLM
SE*
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