prot_S-dermatodea_contig8552.16718.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8552.16718.1
Unique Nameprot_S-dermatodea_contig8552.16718.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length155
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8552.16718.1 vs. uniprot
Match: D8LJC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC6_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 2.550e-49
Identity = 82/138 (59.42%), Postives = 108/138 (78.26%), Query Frame = 0 
Query:    1 MSLPESIVLPQTREAETIRRYALGQADPSYFEKDAAPIFADNMVFNGLLFKVAGGENVRGVFATFVKDIIVEVKFDSIVECGSKDKYLFLYFLRLQGMGENGLYICDYITLDESGLMVRMENCYDTSKCPQEFINAGA 138
            MSLP SIVLP T E ET+RRYALGQ+D S+F + AAPIF+ +MVFNGLLFK+ G  N+  +FA FV + I EV+F++I E GSK KYL LY++RL+G  E+ + + D +TLD+ GL+ R+ENC+DT+KCPQE I+AGA
Sbjct:   92 MSLPASIVLPSTPEGETVRRYALGQSDASFFAEGAAPIFSKDMVFNGLLFKLKGAANIVPLFADFVANKIKEVRFEAIAEAGSKKKYLVLYYVRLEGQ-ESEMPLVDLLTLDDDGLICRLENCFDTTKCPQEIIDAGA 228
[Close]
BLAST of mRNA_S-dermatodea_contig8552.16718.1 vs. uniprot
Match: A0A6H5JHF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHF2_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 9.600e-26
Identity = 53/103 (51.46%), Postives = 72/103 (69.90%), Query Frame = 0 
Query:   43 MVFNGLLFKVAGGENVRGVFATFVKDIIVEVKFDSIVECGSKDKYLFLYFLRLQGMGENGLYICDYITLDESGLMVRMENCYDTSKCPQEFINAGAQATAQAE 145
            MVFNGLLFK+ G  N+  +FA FV + I  V+F++I E GSK KYL LY++RL+G  E+ + + D +T D  GL+ R+ENC+DT+K PQE I+AGA   A  E
Sbjct:    1 MVFNGLLFKLKGAANIVPLFADFVANKIKGVRFEAIAEAGSKTKYLVLYYVRLEGQ-ESEMSLVDLLTQDGEGLICRLENCFDTTKYPQEIIDAGAPTLAGFE 102
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8552.16718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJC6_ECTSI2.550e-4959.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHF2_9PHAE9.600e-2651.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 14..133
e-value: 6.7E-6
score: 27.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8552contigS-dermatodea_contig8552:2358..3705 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8552.16718.1mRNA_S-dermatodea_contig8552.16718.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8552 1947..6626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8552.16718.1 ID=prot_S-dermatodea_contig8552.16718.1|Name=mRNA_S-dermatodea_contig8552.16718.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=155bp
MSLPESIVLPQTREAETIRRYALGQADPSYFEKDAAPIFADNMVFNGLLF
KVAGGENVRGVFATFVKDIIVEVKFDSIVECGSKDKYLFLYFLRLQGMGE
NGLYICDYITLDESGLMVRMENCYDTSKCPQEFINAGAQATAQAEEIFKQ
LNGS*
back to top