prot_S-dermatodea_contig85510.16716.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig85510.16716.1
Unique Nameprot_S-dermatodea_contig85510.16716.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length59
Homology
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BLAST of mRNA_S-dermatodea_contig85510.16716.1 vs. uniprot
Match: D8LJP6_ECTSI (Zn-finger (Ran-binding)-3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP6_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 9.130e-30
Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = 0 
Query:    1 VYLPTLLSPSACYKVPIAVGYTCLAVGKVGHFTALVGVEGELRHLPLVDEHGDDLPVR 58
            VYLPTL+ P  CYK+PIAVGYTC+AVGKVGHFTALVGV+ ELRHLPLVDEHGDDLP+R
Sbjct:   64 VYLPTLVDPDVCYKLPIAVGYTCVAVGKVGHFTALVGVDRELRHLPLVDEHGDDLPIR 121
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BLAST of mRNA_S-dermatodea_contig85510.16716.1 vs. uniprot
Match: A0A6H5JBZ3_9PHAE (OTU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ3_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.810e-26
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 0 
Query:    1 VYLPTLLSPSACYKVPIAVGYTCLAVGKVGHFTALVGVEGELRHLPLVDEHGDDLPVR 58
            VYLPTL+ P  CYK+PIAVGYTC+ VGKVGHFTALVGV+GELRHLPLVDEHGD LP+R
Sbjct:  165 VYLPTLVDPDVCYKLPIAVGYTCVTVGKVGHFTALVGVDGELRHLPLVDEHGDGLPIR 222
[Close]
BLAST of mRNA_S-dermatodea_contig85510.16716.1 vs. uniprot
Match: D7G8I7_ECTSI (OTU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I7_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 6.470e-16
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:    1 VYLPTLLSPSACYKVPIAVGYTCLAVGKVGHFTALVGVEGELRHLPLVDEHGDDLPVR 58
            +YLPTL     CYK  IAV YTC  VG+ GHF+ LVG+  +L++LPLVDEHG +LPVR
Sbjct:  223 IYLPTLQHQDKCYKSAIAVAYTCPVVGRAGHFSPLVGMSKQLKYLPLVDEHGKNLPVR 280
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig85510.16716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJP6_ECTSI9.130e-3084.48Zn-finger (Ran-binding)-3 n=1 Tax=Ectocarpus silic... [more]
A0A6H5JBZ3_9PHAE2.810e-2682.76OTU domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G8I7_ECTSI6.470e-1660.34OTU domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig85510contigS-dermatodea_contig85510:88..264 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig85510.16716.1mRNA_S-dermatodea_contig85510.16716.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig85510 88..264 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig85510.16716.1 ID=prot_S-dermatodea_contig85510.16716.1|Name=mRNA_S-dermatodea_contig85510.16716.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=59bp
VYLPTLLSPSACYKVPIAVGYTCLAVGKVGHFTALVGVEGELRHLPLVDE
HGDDLPVR*
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