prot_S-dermatodea_contig85509.16715.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig85509.16715.1
Unique Nameprot_S-dermatodea_contig85509.16715.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length51
Homology
BLAST of mRNA_S-dermatodea_contig85509.16715.1 vs. uniprot
Match: A0A6H5L2R8_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2R8_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.280e-16
Identity = 39/50 (78.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    1 VTVFKSLTNLVIVTGDYFWHQQGVSALVLLSLVVMTVGAILASWNDIEFK 50
            VTVFKSLTNL+IV GDYFWH Q  + LVLLSL VMT GAILASW+DIEF 
Sbjct:  176 VTVFKSLTNLIIVAGDYFWHSQVATPLVLLSLAVMTGGAILASWSDIEFS 225          
BLAST of mRNA_S-dermatodea_contig85509.16715.1 vs. uniprot
Match: D8LTL4_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL4_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.750e-10
Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    1 VTVFKSLTNLVIVTGDYFWHQQGVSALVLLSLVVMTVGAILASWNDIEFK 50
            VTVFK+LTN+VIVTGD+++ QQ  S LV+ S+ VM  GA+ AS+ND++F 
Sbjct:  119 VTVFKNLTNIVIVTGDWWFFQQAASWLVMFSMAVMVFGALFASYNDLDFN 168          
BLAST of mRNA_S-dermatodea_contig85509.16715.1 vs. uniprot
Match: A0A7S2FDK8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDK8_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 9.860e-9
Identity = 24/50 (48.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 VTVFKSLTNLVIVTGDYFWHQQGVSALVLLSLVVMTVGAILASWNDIEFK 50
            +TVFK+LTN++IV GD++WH+Q V+  V+ S  +M VGA+ A+  D+ F 
Sbjct:    8 ITVFKNLTNVIIVIGDWYWHEQAVTIGVVFSFGIMVVGAVAAAATDVMFS 57          
BLAST of mRNA_S-dermatodea_contig85509.16715.1 vs. uniprot
Match: A0A7S2SW66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW66_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.600e-8
Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 VTVFKSLTNLVIVTGDYFWHQQGVSALVLLSLVVMTVGAILASWNDIEFK 50
            +TVFK+LTN++IV GD++WH Q ++  ++ +  VM VGA+ A+ ND+ F 
Sbjct:  112 ITVFKNLTNILIVAGDWYWHGQRITLGIIAAFGVMVVGAVFAAKNDVLFS 161          
BLAST of mRNA_S-dermatodea_contig85509.16715.1 vs. uniprot
Match: A0A836C853_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C853_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.620e-6
Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 VTVFKSLTNLVIVTGDYFWHQQGVSALVLLSLVVMTVGAILASWNDIE 48
            VTVFK+LTN++IV GD+ ++ Q V+ L+L SL VM  GA LA  +D+E
Sbjct:  105 VTVFKNLTNVIIVWGDWHFYNQSVTLLILASLGVMVFGAALAGKDDME 152          
BLAST of mRNA_S-dermatodea_contig85509.16715.1 vs. uniprot
Match: A0A1W0A2B2_9STRA (GDP-mannose transporter n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2B2_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 2.980e-6
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 VTVFKSLTNLVIVTGDYFWHQQGVSALVLLSLVVMTVGAILASWNDIEFK 50
            VTVFK++TNL+IV G+Y    + V  LVL SLVVM +GA+L S++D+  K
Sbjct:  108 VTVFKNVTNLIIVFGEYRLFGEKVGPLVLGSLVVMLMGAVLTSYSDVGGK 157          
BLAST of mRNA_S-dermatodea_contig85509.16715.1 vs. uniprot
Match: A0A425C448_9STRA (EamA domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C448_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 4.110e-6
Identity = 23/47 (48.94%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 VTVFKSLTNLVIVTGDYFWHQQGVSALVLLSLVVMTVGAILASWNDI 47
            VTVFK++TN++IV G++ +  + V  LVL+SLVVM +GA+++S++D+
Sbjct:  111 VTVFKNVTNIIIVFGEWRFFGERVGGLVLVSLVVMLMGAVMSSYSDV 157          
BLAST of mRNA_S-dermatodea_contig85509.16715.1 vs. uniprot
Match: A0A3F2RNX0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RNX0_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 1.060e-5
Identity = 23/50 (46.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    1 VTVFKSLTNLVIVTGDYFWHQQGVSALVLLSLVVMTVGAILASWNDIEFK 50
            VTVFK++TN++IV G++ +  + V  LV+LSL VM +GA ++S++D+  K
Sbjct:  128 VTVFKNVTNIIIVVGEWRFFGERVGGLVILSLCVMLMGAFMSSYSDVGGK 177          
BLAST of mRNA_S-dermatodea_contig85509.16715.1 vs. uniprot
Match: A0A067BT99_SAPPC (EamA domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BT99_SAPPC)

HSP 1 Score: 49.7 bits (117), Expect = 1.440e-5
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 VTVFKSLTNLVIVTGDYFWHQQGVSALVLLSLVVMTVGAILASWNDIEFK 50
            VTVFK++TNL+IV G+Y    + V  +VL SL VM +GAIL S++D+  K
Sbjct:  110 VTVFKNVTNLIIVFGEYRLFGEKVGPMVLGSLAVMLMGAILTSYSDVGGK 159          
BLAST of mRNA_S-dermatodea_contig85509.16715.1 vs. uniprot
Match: A0A1V9YMT6_9STRA (GDP-mannose transporter n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMT6_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.970e-5
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 VTVFKSLTNLVIVTGDYFWHQQGVSALVLLSLVVMTVGAILASWNDIEFK 50
            VTVFK++TNL+IV G+Y    + V  +VL SL VM +GA+L S++D+  K
Sbjct:  108 VTVFKNVTNLIIVFGEYRLFGEKVGPMVLGSLAVMLMGAVLTSYSDVGGK 157          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig85509.16715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5L2R8_9PHAE1.280e-1678.00TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LTL4_ECTSI1.750e-1058.00TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2FDK8_9STRA9.860e-948.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2SW66_9STRA6.600e-846.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836C853_9STRA1.620e-654.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1W0A2B2_9STRA2.980e-654.00GDP-mannose transporter n=1 Tax=Thraustotheca clav... [more]
A0A425C448_9STRA4.110e-648.94EamA domain-containing protein n=1 Tax=Peronospora... [more]
A0A3F2RNX0_9STRA1.060e-546.00Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A067BT99_SAPPC1.440e-552.00EamA domain-containing protein n=3 Tax=Saprolegnia... [more]
A0A1V9YMT6_9STRA1.970e-550.00GDP-mannose transporter n=1 Tax=Achlya hypogyna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..44
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig85509contigS-dermatodea_contig85509:102..254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig85509.16715.1mRNA_S-dermatodea_contig85509.16715.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig85509 102..254 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig85509.16715.1 ID=prot_S-dermatodea_contig85509.16715.1|Name=mRNA_S-dermatodea_contig85509.16715.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=51bp
VTVFKSLTNLVIVTGDYFWHQQGVSALVLLSLVVMTVGAILASWNDIEFK
*
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