mRNA_S-dermatodea_contig85466.16711.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig85466.16711.1 vs. uniprot
Match: D8LQE4_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE4_ECTSI) HSP 1 Score: 115 bits (287), Expect = 4.750e-28 Identity = 60/80 (75.00%), Postives = 66/80 (82.50%), Query Frame = 1
Query: 1 QADALLVSRSGVPSWLTAMQGDDGWRRTLIELAREHQGSALLRFVLKQLSDRGHHREIAAVISETDLFSVFNGENKPATA 240
+ D LL S +P+WLTAMQ D GWRRTLIELAREH+ SALLRFVLKQLSD G+HREIA+VISETDLFSVFNG K A A
Sbjct: 455 KVDTLLDS--SMPAWLTAMQDDTGWRRTLIELAREHRASALLRFVLKQLSDMGYHREIASVISETDLFSVFNGVLKDALA 532
BLAST of mRNA_S-dermatodea_contig85466.16711.1 vs. uniprot
Match: A0A7S2XIX2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIX2_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.800e-11 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 1
Query: 7 DALLVSRSGVPSWLTAMQGDDGWRRTLIELAREHQGSALLRFVLKQLSDRGHHREIAAVISETDLFSVFNG 219
D +L ++L M D WRR LI+L+ H+ SALL + L+ +S +GHHREIA I+++D FSVFNG
Sbjct: 405 DNILNLSKAEAAFLEEMIDSDEWRRLLIDLSATHKDSALLMYCLQSISKKGHHREIARRINQSDYFSVFNG 475
BLAST of mRNA_S-dermatodea_contig85466.16711.1 vs. uniprot
Match: A0A7R9VET2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VET2_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 2.020e-10 Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 67 DGWRRTLIELAREHQGSALLRFVLKQLSDRGHHREIAAVISETDLFSVFN 216
D WRR LI+L+ H+ SA+L + L+ +S RGHHREIA I+++D F VFN
Sbjct: 4 DRWRRLLIDLSASHKDSAVLMYCLRSISKRGHHREIARRINQSDYFGVFN 53
BLAST of mRNA_S-dermatodea_contig85466.16711.1 vs. uniprot
Match: A0A7S3YJY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJY7_HETAK) HSP 1 Score: 61.6 bits (148), Expect = 2.170e-10 Identity = 31/73 (42.47%), Postives = 41/73 (56.16%), Query Frame = 1
Query: 1 QADALLVSRSGVPSWLTAMQGDDGWRRTLIELAREHQGSALLRFVLKQLSDRGHHREIAAVISETDLFSVFNG 219
+ADA+L P +L M WR L+ L H+ SALL F + LS++G H+EIAAV+S D VF G
Sbjct: 44 RADAILEELDACPDFLAEMLRKKRWRHALLRLFNRHERSALLGFCARYLSEKGFHKEIAAVLSRPDDLGVFRG 116
BLAST of mRNA_S-dermatodea_contig85466.16711.1 vs. uniprot
Match: A0A7S4MCL4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCL4_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.150e-9 Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 1 QADALLVSRSGVPSWLTAMQGDDGWRRTLIELAREHQGSALLRFVLKQLSDRGHHREIAAVISETDLFSVFN 216
+ D +L ++L M D WRR LI+L+ H+ SA+L + L+ +S RGHHREIA I+++D F VFN
Sbjct: 415 KGDEILNLSKTEAAFLEEMIESDRWRRLLIDLSAAHKDSAVLMYCLQTISKRGHHREIARRINQSDYFGVFN 486
BLAST of mRNA_S-dermatodea_contig85466.16711.1 vs. uniprot
Match: A0A7S1ZHF4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHF4_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.160e-9 Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 7 DALLVSRSGVPSWLTAMQGDDGWRRTLIELAREHQGSALLRFVLKQLSDRGHHREIAAVISETDLFSVFN 216
D++L ++L M + WR+ LI+L+ H+ SALL + L+++S RGHHREIA I+++D F VFN
Sbjct: 256 DSILSLSKAEVAFLEEMFESNRWRKLLIDLSATHKDSALLMYCLQKISKRGHHREIAKRINQSDYFGVFN 325
BLAST of mRNA_S-dermatodea_contig85466.16711.1 vs. uniprot
Match: A0A7S1ZHQ3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHQ3_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.180e-9 Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 7 DALLVSRSGVPSWLTAMQGDDGWRRTLIELAREHQGSALLRFVLKQLSDRGHHREIAAVISETDLFSVFN 216
D++L ++L M + WR+ LI+L+ H+ SALL + L+++S RGHHREIA I+++D F VFN
Sbjct: 256 DSILSLSKAEVAFLEEMFESNRWRKLLIDLSATHKDSALLMYCLQKISKRGHHREIAKRINQSDYFGVFN 325
BLAST of mRNA_S-dermatodea_contig85466.16711.1 vs. uniprot
Match: A0A1Z5JEL4_FISSO (Negative elongation factor C/D n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEL4_FISSO) HSP 1 Score: 59.3 bits (142), Expect = 1.970e-8 Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 1
Query: 7 DALLVSRSGVPSWLTAMQGDDGWRRTLIELAREHQGSALLRFVLKQLSDRGHHREIAAVISETDLFSVFN 216
D +L ++L M WR+ LI+L+ H+ SA+L + L+ +S RGHHREIA ++++D F+VFN
Sbjct: 317 DRILNLSKAEAAFLEEMMDSSRWRKLLIDLSAVHKDSAVLIYCLQAISKRGHHREIAKRVNQSDHFAVFN 386
BLAST of mRNA_S-dermatodea_contig85466.16711.1 vs. uniprot
Match: A0A7S1GN86_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GN86_CYCTE) HSP 1 Score: 54.7 bits (130), Expect = 4.490e-7 Identity = 25/70 (35.71%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 7 DALLVSRSGVPSWLTAMQGDDGWRRTLIELAREHQGSALLRFVLKQLSDRGHHREIAAVISETDLFSVFN 216
D + + +L M + WR+ LI+L+ ++ S +L + L +S RGHHREIA I+++D FSV++
Sbjct: 103 DNIFKLKKSEAVFLEEMMDSERWRKLLIDLSAANRDSTILNYCLSSISKRGHHREIAKRINQSDHFSVYS 172
BLAST of mRNA_S-dermatodea_contig85466.16711.1 vs. uniprot
Match: A0A7S4EQP7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQP7_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 4.520e-7 Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 43 WLTAMQGDDGWRRTLIELAREHQGSALLRFVLKQLSDRGHHREIAAVISETDLFSVFN 216
+L M + WR+ LI+L+ + SALL + L+ +S RGHHREIA I++++ F VFN
Sbjct: 671 FLEDMMNSNRWRKLLIDLSASKKDSALLMYCLQSISKRGHHREIARRINQSEHFPVFN 728 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig85466.16711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig85466.16711.1 >prot_S-dermatodea_contig85466.16711.1 ID=prot_S-dermatodea_contig85466.16711.1|Name=mRNA_S-dermatodea_contig85466.16711.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=80bp QADALLVSRSGVPSWLTAMQGDDGWRRTLIELAREHQGSALLRFVLKQLSback to top mRNA from alignment at S-dermatodea_contig85466:131..370- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig85466.16711.1 ID=mRNA_S-dermatodea_contig85466.16711.1|Name=mRNA_S-dermatodea_contig85466.16711.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=240bp|location=Sequence derived from alignment at S-dermatodea_contig85466:131..370- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig85466:131..370- >mRNA_S-dermatodea_contig85466.16711.1 ID=mRNA_S-dermatodea_contig85466.16711.1|Name=mRNA_S-dermatodea_contig85466.16711.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at S-dermatodea_contig85466:131..370- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |