mRNA_S-dermatodea_contig8531.16702.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8531.16702.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 8.360e-15 Identity = 45/122 (36.89%), Postives = 63/122 (51.64%), Query Frame = 1
Query: 1 KKWFASTKSLQLASLQFCVVCREKVTVHLQVKVATPRRLWASDEAYKSTSRGSHAQGQTSKRLPALGVRGITWELSTSPQAVFKDLPPIGRLECPRGGDSLNRGVRRLSWPRHLTSVVFGHD 366
K W+ STK LQLASL FC+ CR TVHL V PRRL AS +A H + R+P L R +TW + T+ + + + + +E GD+ + + WP HL ++ F HD
Sbjct: 66 KSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPP-----HPKRLCWTRVPRLRSRRVTWNMPTAAK-LRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHD 181
BLAST of mRNA_S-dermatodea_contig8531.16702.1 vs. uniprot
Match: A0A6H5K0U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0U4_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 6.820e-12 Identity = 44/114 (38.60%), Postives = 60/114 (52.63%), Query Frame = 1
Query: 1 KKWFASTKSLQLASLQFCVVCREKVTVHLQVKVATPRRLWASDEAYKSTSRGSHAQGQTSKRLPALGVRGITWELSTSPQAVFKDLPPIGRLECPRGGDSLNRGVRRLSWPRHL 342
K WFASTK LQLASLQ C CR+ +HL+V +TP RL A + S S GS + R+P L R ++W+L TS + + + + DSLN + + WP L
Sbjct: 47 KHWFASTKELQLASLQLCEACRDAAALHLRVNTSTPLRLLAPAD---SPSDGS----EEGTRVPRLRAREVSWDL-TSADRLSSSIYALASAQVFTFSDSLNAVLDAVVWPTSL 152
BLAST of mRNA_S-dermatodea_contig8531.16702.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 4.070e-11 Identity = 40/124 (32.26%), Postives = 60/124 (48.39%), Query Frame = 1
Query: 1 KKWFASTKSLQLASLQFCVVCREKVTVHLQVKVATPRRLWASDEAYKSTSRGSHAQGQTSKRLPALGVRGITWELSTSPQA-----VFKDLPPIGRLECPRGGDSLNRGVRRLSWPRHLTSVVF 357
K+W+ STK LQLASL+FC+ CR+ + L+V TPR L A+ +A H + R+P L R + W + T+ + KD + C R G N + + WP L ++F
Sbjct: 32 KRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPP-----HTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKD------VNCLRFGGVFNGSLEAVVWPPPLKQIIF 144
BLAST of mRNA_S-dermatodea_contig8531.16702.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 2.670e-10 Identity = 40/119 (33.61%), Postives = 60/119 (50.42%), Query Frame = 1
Query: 1 KKWFASTKSLQLASLQFCVVCREKVTVHLQVKVATPRRLWASDEAYKSTSRGSHAQGQTSKRLPALGVRGITWELSTSP--QAVFKDLPPIGRLECPRGGDSLNRGVRRLSWPRHLTSV 351
K W+ STK QLASL+FC+ CR T+ L+V TPRRL A+ +A H + R+P L R +TW++ T+ + + LE R + + ++WPR L +V
Sbjct: 27 KSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPP-----HPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFED---SLEAVAWPRRLKTV 137
BLAST of mRNA_S-dermatodea_contig8531.16702.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI) HSP 1 Score: 62.8 bits (151), Expect = 2.300e-8 Identity = 41/124 (33.06%), Postives = 60/124 (48.39%), Query Frame = 1
Query: 1 KKWFASTKSLQLASLQFCVVCREKVTVHLQVKVATPRRLWASDEAYKSTSRGSHAQGQTSKRLPALGVRGITWELSTSPQAVFKDLPPIGR--LECPRGGDSLNRGVR----RLSWPRHLTSVV 354
+ W+ STK LQLASL+FCV CR T+HL+V PRRL A +A H + R+P L R +TW + +A +P ++C + G++ +R R W R S +
Sbjct: 128 ESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPP-----HPELLCRTRVPRLRARRVTWGMR---KAAELSIPIFAMTDVDCLKFGETSLEALRLWHGRDGWKRSSFSFL 243
BLAST of mRNA_S-dermatodea_contig8531.16702.1 vs. uniprot
Match: A0A6H5K4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H1_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 4.030e-8 Identity = 39/123 (31.71%), Postives = 63/123 (51.22%), Query Frame = 1
Query: 1 KKWFASTKSLQLASLQFCVVCREKVTVHLQVKVATPRRLWAS---DEAYKSTSRGSHAQGQTSKRLPALGVRGITWELSTSPQAVFKDLPPIGRLECPRGGDSLNRGVRRLSWPRHLTSVVFG 360
+ W+ ST LQLASL FC+ CR+ VT+ L V + PRRL A +EA + + G G++ R+P R +TW + + + + + ++ NR + ++WPR L + FG
Sbjct: 46 ESWYVSTTQLQLASLPFCLACRDSVTLCLTVDDSIPRRLLADVGGNEAVVAPA-GPCQCGRS--RVPRFHAREVTWHRQSCVE-LSASIYALAEVDFFILDGGFNRAIGAVAWPRKLRRLEFG 164
BLAST of mRNA_S-dermatodea_contig8531.16702.1 vs. uniprot
Match: D7FUL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL9_ECTSI) HSP 1 Score: 56.6 bits (135), Expect = 1.380e-6 Identity = 30/69 (43.48%), Postives = 39/69 (56.52%), Query Frame = 1
Query: 1 KKWFASTKSLQLASLQFCVVCREKVTVHLQVKVATPRRLWASDEAYKSTSRGSHAQGQTSKRLPALGVR 207
K WFASTK LQLASLQ C CR+ +HL+V +TP RL+A ++ S + R+P L R
Sbjct: 47 KHWFASTKELQLASLQLCEACRDAAALHLRVDTSTPLRLFAPADSPSDDS-------EEDTRVPRLRAR 108
BLAST of mRNA_S-dermatodea_contig8531.16702.1 vs. uniprot
Match: A0A6H5JF56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF56_9PHAE) HSP 1 Score: 52.8 bits (125), Expect = 7.140e-5 Identity = 30/76 (39.47%), Postives = 37/76 (48.68%), Query Frame = 1
Query: 1 KKWFASTKSLQLASLQFCVVCREKVTVHLQVKVATPRRLWASDEAYKSTSRGSHAQGQTSKRLPALGVRGITWELS 228
KKW+ S LQLASL FCV CR + L V TP RLW T R+PA+ VR + W+L+
Sbjct: 51 KKWYTSIAGLQLASLAFCVACRNVLAPCLTVDKGTPLRLWCGPCTTPLEVL------TTVTRVPAIRVREVVWKLT 120 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8531.16702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8531.16702.1 >prot_S-dermatodea_contig8531.16702.1 ID=prot_S-dermatodea_contig8531.16702.1|Name=mRNA_S-dermatodea_contig8531.16702.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=177bp KKWFASTKSLQLASLQFCVVCREKVTVHLQVKVATPRRLWASDEAYKSTSback to top mRNA from alignment at S-dermatodea_contig8531:1909..2441+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8531.16702.1 ID=mRNA_S-dermatodea_contig8531.16702.1|Name=mRNA_S-dermatodea_contig8531.16702.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=533bp|location=Sequence derived from alignment at S-dermatodea_contig8531:1909..2441+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8531:1909..2441+ >mRNA_S-dermatodea_contig8531.16702.1 ID=mRNA_S-dermatodea_contig8531.16702.1|Name=mRNA_S-dermatodea_contig8531.16702.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1062bp|location=Sequence derived from alignment at S-dermatodea_contig8531:1909..2441+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |