mRNA_S-dermatodea_contig852.16692.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig852.16692.1 vs. uniprot
Match: D7G7T3_ECTSI (GDSL-lilke lipase/acylhydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T3_ECTSI) HSP 1 Score: 428 bits (1101), Expect = 2.760e-143 Identity = 220/314 (70.06%), Postives = 251/314 (79.94%), Query Frame = 2
Query: 284 STSLSVALVGDSVLDDHYWLYRPQEDVREQTERTLRLAYPSRDVQVLNFAVDESTVKCVLRGRRPAAHYRQGRERARMERYPMGEDGVVRPLRLLRDAKPSHVVLSVGGNDARIRFLQSRDPDVITQLMVTDGLVANLRRLVETIRTEITPNIIIVYVFMPQFKLVPLLSFLPPASILQHLLVNFSKFFIELANEFCLPIIDLSRTFDPTKKSHYGSTPIEPSNVSGQFIADLIAEARTTPLARYRFNAPRWTVLARFRFGEETGGKVFSGVGDEFKLQDLSPGVG--FSYEHELRVFLDLKRAQKPS-SCTIG 1216
++ L+VALVGDSVLDDHYWL P DVR QTERTL++AYP R ++V NFAVDEST+ CVLRGR PAAHYR GR +A+ME YP+ EDGVVRPL+LLR+AKP+HVVLS+GGNDARIRFLQSR+PDV+T+LM+TDG VANLRR+VETIR EITPNII+VYV+MP+FK PLLS LPPA ILQ LLVNFSKFFIELA EF LPIIDLSRTFDP K HYGSTPIEPSNVSGQFIADL+A+ VLARFRFGEE GGK+FSG G E + DL+P FSY EL+ F D K A+KP+ SC IG
Sbjct: 3 TSDLNVALVGDSVLDDHYWLDHPPNDVRAQTERTLKIAYPDRSIRVDNFAVDESTISCVLRGRAPAAHYRNGRRKAKMEPYPVEEDGVVRPLKLLREAKPTHVVLSIGGNDARIRFLQSRNPDVVTELMITDGFVANLRRVVETIRAEITPNIILVYVYMPEFKTFPLLSMLPPARILQRLLVNFSKFFIELAVEFHLPIIDLSRTFDPNNKKHYGSTPIEPSNVSGQFIADLVAQ-----------------VLARFRFGEEAGGKIFSGTGGELVVHDLAPDAAARFSYGRELQAFFDRKAAEKPATSCVIG 299
BLAST of mRNA_S-dermatodea_contig852.16692.1 vs. uniprot
Match: A0A7S2TYU9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYU9_9EUKA) HSP 1 Score: 196 bits (499), Expect = 9.000e-54 Identity = 129/318 (40.57%), Postives = 178/318 (55.97%), Query Frame = 2
Query: 263 EQSQAVTSTSLSVALVGDSVLDDHYWLYRPQEDVREQTERTLRLAYPSRDVQVLNFAVDESTVKCVLRGRRPAAHYRQGRERARMERYPMGEDGVVRPLRLLRDAK-PSHVVLSVGGNDARIRFLQSRDPDVITQLMVTDGLVANLRRLVETIRTEITPNIIIVYVFMPQFKLVPLLSFLPPASILQHLLVNFSKFFIELANEFCLPIIDLSRTFDPTKKSHYGSTPIEPSNVSGQFIADLIAEARTTPLARYRFNAPRWTVLARFRFGEETGGKVFSGVGDEFKLQDLSPGVGFSYEHELRVFLDLKRAQKPSSCTI 1213
E ++ + V L+GDSVLD YWL ++DVR + ER L+ ++D + N+AVDES + VL G P Y + R +ME YPM + GVVRPL LLR+ K P+HV+LSVGGNDAR F+ S D D I MV +G++ RLV I+ + PN+I+V V+ PQ P + LP A+ + L+V FS F ++A +F LP+IDL+RTF+P + YGS+PIEPSN SG IA+L + + FN V G+++G + + +DLS Y LR L R PSSC I
Sbjct: 10 EDTKTKARAAAHVVLMGDSVLDTFYWLRDKKKDVRYEMERLLK--EDNKDSKCTNYAVDESQIDHVLVGICPNPGYVRSRRWNKMEPYPMDQRGVVRPLVLLRELKDPTHVLLSVGGNDARAAFVSSFDIDNIYITMVENGIIERFERLVAEIK-NVVPNLILVIVYHPQITACPFVYMLPKAATITELIVRFSPMFFDIAKKFKLPVIDLARTFNPYDSNDYGSSPIEPSNTSGIMIAELAKYI----IHDFDFNKDDAKVYTGL-VGKDSGYRALKVERLDDSWKDLS-----KYRSSLRDHLADGRRNAPSSCVI 314
BLAST of mRNA_S-dermatodea_contig852.16692.1 vs. uniprot
Match: A0A813EBC2_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EBC2_POLGL) HSP 1 Score: 83.2 bits (204), Expect = 3.530e-13 Identity = 90/300 (30.00%), Postives = 132/300 (44.00%), Query Frame = 2
Query: 260 VEQSQAVTSTSLSVALVGDSVLDDHYWLYRPQEDVREQTERTLRLAYPSRDVQVL---NFAVDESTV------KCVLRGRRPAAHYRQ--GRERARMERYPMGEDGVVRPLRLLRDAKPSH-VVLSVGGNDARIRFLQSR-DPDVITQLM---------VTDGLVANLRRLVETIRTEITPNIIIVYVFMPQFKLVPLLSFLP----------------PASI----LQHLLVNFSKFFIELANEFCLPIIDLSRTFDPTKKSHYGSTPI-------------EPSNVSGQFIADLIAEA 994
V +QA ST V L+GDSVLD+ YWL P++ +R Q E LR A ++ ++ L N AVD+ T K P A R+ G E + E Y +G+DG +R ++ L+ K VLS+GGND +L S+ ++T L+ V + LR+ V +R +++ + K LL P P ++ L L+ K + A E ++DLSRT DP + HYG+ I EPSN+S FIA L+ A
Sbjct: 79 VASTQAAESTRDQVVLLGDSVLDNFYWLEDPKQHLRVQLEEELR-ASRNQKIKALACVNLAVDQMTTFDFIERKAAQNPWEPFAAARKLVGFEDPQDEEYVVGKDGSIRSVKNLKRLKAVRWAVLSLGGNDV---YLNSQVQTSLLTSLLPPFKQKRVEVAEAFGQRLRKAVAELRKAAPEAALVLVIPYQPHKDFSLLLGAPINAEGERIAGDFTGDIPRNLERQNLSDLVTPMIKEILATAREVGCAVVDLSRTLDPECEEHYGTGEIGRVNALGAPWSGAEPSNLSSGFIAKLLVHA 374
BLAST of mRNA_S-dermatodea_contig852.16692.1 vs. uniprot
Match: A0A1Q9EC56_SYMMI (Uncharacterized protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EC56_SYMMI) HSP 1 Score: 79.0 bits (193), Expect = 6.290e-12 Identity = 79/281 (28.11%), Postives = 125/281 (44.48%), Query Frame = 2
Query: 308 VGDSVLDDHYWLYRPQEDVREQTERTLRLAYPS--RDVQVLNFAVDESTVKCVLRGRRPAAH----YRQGRERARME-----RYPMGEDGVVRPLRLLRDAKPSH-VVLSVGGNDA------RIRFLQSRDPDVI-TQLMVTDGLVANLRRLVETIRTEITPNIIIVYVFMPQFKLVPLLSFLP--------------------PASILQHLLVNFSKFFIELANEFCLPIIDLSRTFDPTKKSHYGSTPI-------------EPSNVSGQFIADLIAEA 994
+GDSVLD+ +WL P +R Q + TL + + R +QV+N AVD+ T R +A+ Y Q RE+ E +Y + +DG++R ++ L+ V+LS+GGND + R + S P + V A L+++ E ++ +++ V + LL+ P +L L+ + LA + P+IDLS+TFD + + HYG+ I EPS+VS FIA LIA A
Sbjct: 1 MGDSVLDNFFWLETPSRPLRVQLQETLGKSRDAKVRQLQVVNLAVDQMTT-FDFEERSASANPWDVYAQAREKVDFEAEEDKKYMVDQDGIIRSVKNLKSLNNVRWVILSLGGNDVYLNSGVKTRLINSLVPGSEGVRKEVAKEFGARLKKVAEQVQKAAPDATLVLVVPYQPHEEFSLLAGAPINDEGARIYGDFLGDGARGLERQLLPDLVTPMVTEILTLAQDLDCPVIDLSQTFDSSMEEHYGTGEIGRVNSLGTPWSGAEPSDVSSNFIAQLIANA 280
BLAST of mRNA_S-dermatodea_contig852.16692.1 vs. uniprot
Match: X6P0L7_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6P0L7_RETFI) HSP 1 Score: 72.8 bits (177), Expect = 2.390e-11 Identity = 37/99 (37.37%), Postives = 58/99 (58.59%), Query Frame = 2
Query: 299 VALVGDSVLDDHYWLYRPQEDVREQTERTLRLAYPSRDVQVLNFAVDESTVKCVLRGRRPAAHYRQGRERARMERYPMGEDGVVRPLRLLRDAKPSHVV 595
+ L+GDSVLD+ +WL D+ + ++T +LN AVDEST+K VL+GR+PA Y GR+ +++ YP G V PL+ ++D S ++
Sbjct: 37 LVLMGDSVLDNFFWLDDKSTDLEKVLDKTFE-----EKADILNLAVDESTIKSVLKGRKPAIQYVNGRKENKLKAYPTQSSGKVEPLKNIKDLIESGIL 130
BLAST of mRNA_S-dermatodea_contig852.16692.1 vs. uniprot
Match: A0A813EV29_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EV29_POLGL) HSP 1 Score: 68.2 bits (165), Expect = 4.680e-8 Identity = 80/277 (28.88%), Postives = 119/277 (42.96%), Query Frame = 2
Query: 245 LRHMSVEQSQAVTST--SLSVALVGDSVLDDHYWLYRPQEDVREQTERTLRLAYPSRDVQVL---NFAVDESTV------KCVLRGRRPAAHYRQ--GRERARMERYPMGEDGVVRPLRLLRDAKPSH-VVLSVGGNDARIRFLQSR-DPDVITQLM---------VTDGLVANLRRLVETIRTEITPNIIIVYVFMPQFKLVPLLSFLP--------------------PASILQHLLVNFSKFFIELANEFCLPIIDLSRTFDPTKKSHYGSTPI 943
L +V +QA ST V L+GDSVLD+ YWL P++ +R Q E LR A ++ ++ L N AVD+ T K P A R+ G E + E Y +G+DG +R ++ L+ K VLS+GGND +L S+ ++T L+ V + LR+ V +R +++ + K LL P L L+ K + A E ++DLSRT DP + HYG+ I
Sbjct: 966 LLRAAVASTQAAESTRDQDKVVLLGDSVLDNFYWLEDPKQHLRVQLEEELR-ASRNQKIKALACVNLAVDQMTTFDFIERKTTQNPWEPYAAARKLVGFEDPQDEEYVVGKDGSIRSVKNLKRLKAVRWAVLSLGGNDV---YLNSQVQTSLLTSLLPPFKQKRVEVAEAFGQRLRKAVAELRKAAPEAALVLVIPYQPHKDFSLLLGAPINADGERIAGDFTGDIARNLERQNLSDLVTPMIKEILATAREVGCAVVDLSRTLDPECEEHYGTGEI 1238 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig852.16692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig852.16692.1 >prot_S-dermatodea_contig852.16692.1 ID=prot_S-dermatodea_contig852.16692.1|Name=mRNA_S-dermatodea_contig852.16692.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=322bp MSVEQSQAVTSTSLSVALVGDSVLDDHYWLYRPQEDVREQTERTLRLAYPback to top mRNA from alignment at S-dermatodea_contig852:15391..19135- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig852.16692.1 ID=mRNA_S-dermatodea_contig852.16692.1|Name=mRNA_S-dermatodea_contig852.16692.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3745bp|location=Sequence derived from alignment at S-dermatodea_contig852:15391..19135- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig852:15391..19135- >mRNA_S-dermatodea_contig852.16692.1 ID=mRNA_S-dermatodea_contig852.16692.1|Name=mRNA_S-dermatodea_contig852.16692.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at S-dermatodea_contig852:15391..19135- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |